RNA–Protein interactions for RNA: ENST00000559201.5

LRRC49-215, Transcript of leucine rich repeat containing 49, human

TSL 3

Gene LRRC49, Length 938 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-215	ENST00000559201	UBE2S	Q16763	222 aa		12.03	□□□□□ -0.48
LRRC49-215	ENST00000559201	SPECC1L	Q69YQ0	1117 aa		12.03	□□□□□ -0.48
LRRC49-215	ENST00000559201	FCHSD1	Q86WN1	690 aa		12.03	□□□□□ -0.48
LRRC49-215	ENST00000559201	FAM114A1	Q8IWE2	563 aa		12.03	□□□□□ -0.48
LRRC49-215	ENST00000559201	TRIM9	Q9C026	710 aa		12.03	□□□□□ -0.48
LRRC49-215	ENST00000559201	BLZF1	Q9H2G9	400 aa		12.03	□□□□□ -0.48
LRRC49-215	ENST00000559201	RANBP17	Q9H2T7	1088 aa	Known RBP	12.03	□□□□□ -0.48
LRRC49-215	ENST00000559201	EXOC1	Q9NV70	894 aa		12.03	□□□□□ -0.48
LRRC49-215	ENST00000559201	PYCARD	Q9ULZ3	195 aa		12.03	□□□□□ -0.48
LRRC49-215	ENST00000559201	ABCB11	O95342	1321 aa		12.03	□□□□□ -0.48
LRRC49-215	ENST00000559201	KIF13B	Q9NQT8	1826 aa		12.02	□□□□□ -0.48
LRRC49-215	ENST00000559201	SCN9A	Q15858	1988 aa		12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	PSD	A5PKW4	1024 aa	Predicted RBP	12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	GCOM1	H8Y6P7	765 aa	Predicted RBP	12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	KLRC4	O43908	158 aa		12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	KIF20A	O95235	890 aa		12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	POLR2M	P0CAP2	368 aa		12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	ATP1A3	P13637	1013 aa		12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	EEF1G	P26641	437 aa	Known RBP	12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	USP14	P54578	494 aa		12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	ARHGAP4	P98171	946 aa		12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	TRIM14	Q14142	442 aa		12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	RASA3	Q14644	834 aa		12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	KMT5B	Q4FZB7	885 aa		12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	TMEM119	Q4V9L6	283 aa		12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	HAUS3	Q68CZ6	603 aa		12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	KLHL10	Q6JEL2	608 aa		12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	UNC13D	Q70J99	1090 aa		12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	SNX29	Q8TEQ0	813 aa		12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	NELFB	Q8WX92	580 aa		12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	CRYGN	Q8WXF5	182 aa		12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	LARP4B	Q92615	738 aa	Known RBP	12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	RAD54L	Q92698	747 aa		12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	CCDC51	Q96ER9	411 aa		12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	NAP1L5	Q96NT1	182 aa	Predicted RBP	12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	MMTAG2	Q9BU76	263 aa	Known RBP	12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	TMEM39B	Q9GZU3	492 aa		12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	MAF1	Q9H063	256 aa		12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	THAP9	Q9H5L6	903 aa		12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	KCNMB3	Q9NPA1	279 aa		12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	BCS1L	Q9Y276	419 aa		12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	PPP2R3B	Q9Y5P8	575 aa		12.02	□□□□□ -0.49
LRRC49-215	ENST00000559201	PP2D1	A8MPX8	630 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	USP17L15	C9J2P7	530 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	USP17L13	C9JLJ4	530 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	USP17L11	C9JVI0	530 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	USP17L18	D6R9N7	530 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	USP17L22	D6RA61	530 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	USP17L17	D6RBQ6	530 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	USP17L19	D6RCP7	530 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	USP17L20	D6RJB6	530 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	WDR46	O15213	610 aa	Known RBP	12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	SLC37A4	O43826	429 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	EDIL3	O43854	480 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	PRKCSH	P14314	528 aa	Predicted RBP	12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	CD44	P16070	742 aa	Known RBP	12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	MUT	P22033	750 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	CDC25A	P30304	524 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	ASIC1	P78348	528 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	JAG1	P78504	1218 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	USP17L24	Q0WX57	530 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	TBX2	Q13207	712 aa	Predicted RBP	12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	GRB10	Q13322	594 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	NBPF9	Q3BBW0	867 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	USP17L6P	Q6QN14	398 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	PPFIBP1	Q86W92	1011 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	MCF2L2	Q86YR7	1114 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	APOBEC3F	Q8IUX4	373 aa	Known RBP	12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	STAM	Q92783	540 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	HAS1	Q92839	578 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	SGIP1	Q9BQI5	828 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	NAA15	Q9BXJ9	866 aa	Known RBP	12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	KIAA1683	Q9H0B3	1180 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	AS3MT	Q9HBK9	375 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	SAMSN1	Q9NSI8	373 aa	Known RBP	12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	MAGEC2	Q9UBF1	373 aa	Predicted RBP	12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	CNOT7	Q9UIV1	285 aa	Known RBP	12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	PAXBP1	Q9Y5B6	917 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	ITIH6	Q6UXX5	1313 aa		12.01	□□□□□ -0.49
LRRC49-215	ENST00000559201	ZNF646	O15015	1829 aa	Predicted RBP	12	□□□□□ -0.49
LRRC49-215	ENST00000559201	PSME4	Q14997	1843 aa		12	□□□□□ -0.49
LRRC49-215	ENST00000559201	GOLGA6L9	A6NEM1	432 aa		12	□□□□□ -0.49
LRRC49-215	ENST00000559201	PHF20L1	A8MW92	1017 aa		12	□□□□□ -0.49
LRRC49-215	ENST00000559201	ZSCAN12	O43309	604 aa		12	□□□□□ -0.49
LRRC49-215	ENST00000559201	SLURP2	P0DP57	97 aa		12	□□□□□ -0.49
LRRC49-215	ENST00000559201	CCNE1	P24864	410 aa		12	□□□□□ -0.49
LRRC49-215	ENST00000559201	ZNF76	P36508	570 aa		12	□□□□□ -0.49
LRRC49-215	ENST00000559201	PRCP	P42785	496 aa		12	□□□□□ -0.49
LRRC49-215	ENST00000559201	GMPS	P49915	693 aa	Predicted RBP	12	□□□□□ -0.49
LRRC49-215	ENST00000559201	CCZ1B	P86790	482 aa		12	□□□□□ -0.49
LRRC49-215	ENST00000559201	CCZ1	P86791	482 aa	Predicted RBP	12	□□□□□ -0.49
LRRC49-215	ENST00000559201	PDE4D	Q08499	809 aa		12	□□□□□ -0.49
LRRC49-215	ENST00000559201	LRMP	Q12912	555 aa		12	□□□□□ -0.49
LRRC49-215	ENST00000559201	FAM83B	Q5T0W9	1011 aa		12	□□□□□ -0.49
LRRC49-215	ENST00000559201	PRPF38A	Q8NAV1	312 aa	Known RBP	12	□□□□□ -0.49
LRRC49-215	ENST00000559201	ACER1	Q8TDN7	264 aa		12	□□□□□ -0.49
LRRC49-215	ENST00000559201	IQCD	Q96DY2	449 aa		12	□□□□□ -0.49
LRRC49-215	ENST00000559201	PNMA5	Q96PV4	448 aa		12	□□□□□ -0.49
LRRC49-215	ENST00000559201	MED15	Q96RN5	788 aa		12	□□□□□ -0.49

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