RNA–Protein interactions for RNA: ENST00000558651.5

HMG20A-205, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 494 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-205ENST00000558651 ZBTB8AQ96BR9 441 aa4.54□□□□□ -1.68
HMG20A-205ENST00000558651 RCC1LQ96I51 464 aaKnown RBP4.54□□□□□ -1.68
HMG20A-205ENST00000558651 APBA2Q99767 749 aa4.54□□□□□ -1.68
HMG20A-205ENST00000558651 KRTAP9-3Q9BYQ3 159 aa4.54□□□□□ -1.68
HMG20A-205ENST00000558651 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.54□□□□□ -1.68
HMG20A-205ENST00000558651 CNOT11Q9UKZ1 510 aaKnown RBP4.54□□□□□ -1.68
HMG20A-205ENST00000558651 PLA2G1BP04054 148 aaKnown RBP4.53□□□□□ -1.68
HMG20A-205ENST00000558651 FUCA1P04066 466 aa4.53□□□□□ -1.68
HMG20A-205ENST00000558651 SOX9P48436 509 aa4.53□□□□□ -1.68
HMG20A-205ENST00000558651 GIPRP48546 466 aa4.53□□□□□ -1.68
HMG20A-205ENST00000558651 CACNB2Q08289 660 aaPredicted RBP4.53□□□□□ -1.68
HMG20A-205ENST00000558651 ZXDCQ2QGD7 858 aaPredicted RBP4.53□□□□□ -1.68
HMG20A-205ENST00000558651 VWA3BQ502W6 1294 aa4.53□□□□□ -1.68
HMG20A-205ENST00000558651 LDLRAD1Q5T700 205 aa4.53□□□□□ -1.68
HMG20A-205ENST00000558651 KIAA1211LQ6NV74 962 aa4.53□□□□□ -1.68
HMG20A-205ENST00000558651 VHLLQ6RSH7 139 aa4.53□□□□□ -1.68
HMG20A-205ENST00000558651 FERMT3Q86UX7 667 aa4.53□□□□□ -1.68
HMG20A-205ENST00000558651 ZC3H18Q86VM9 953 aaKnown RBP4.53□□□□□ -1.68
HMG20A-205ENST00000558651 ARHGEF39Q8N4T4 335 aa4.53□□□□□ -1.68
HMG20A-205ENST00000558651 UBE2Q2Q8WVN8 375 aa4.53□□□□□ -1.68
HMG20A-205ENST00000558651 DDX1Q92499 740 aaKnown RBP4.53□□□□□ -1.68
HMG20A-205ENST00000558651 YIPF4Q9BSR8 244 aa4.53□□□□□ -1.68
HMG20A-205ENST00000558651 BCAS3Q9H6U6 928 aa4.53□□□□□ -1.68
HMG20A-205ENST00000558651 BTG4Q9NY30 223 aa4.53□□□□□ -1.68
HMG20A-205ENST00000558651 JAG2Q9Y219 1238 aa4.53□□□□□ -1.68
HMG20A-205ENST00000558651 PRICKLE3O43900 615 aaPredicted RBP4.52□□□□□ -1.69
HMG20A-205ENST00000558651 KCNH1O95259 989 aa4.52□□□□□ -1.69
HMG20A-205ENST00000558651 CNR2P34972 360 aa4.52□□□□□ -1.69
HMG20A-205ENST00000558651 NASPP49321 788 aaPredicted RBP4.52□□□□□ -1.69
HMG20A-205ENST00000558651 HTRA3P83110 453 aa4.52□□□□□ -1.69
HMG20A-205ENST00000558651 KIAA2012Q0VF49 1180 aa4.52□□□□□ -1.69
HMG20A-205ENST00000558651 ETV3LQ6ZN32 361 aa4.52□□□□□ -1.69
HMG20A-205ENST00000558651 PUS7Q96PZ0 661 aaKnown RBP4.52□□□□□ -1.69
HMG20A-205ENST00000558651 MCMBPQ9BTE3 642 aa4.52□□□□□ -1.69
HMG20A-205ENST00000558651 KRTAP4-5Q9BYR2 181 aa4.52□□□□□ -1.69
HMG20A-205ENST00000558651 MARCH2Q9P0N8 246 aa4.52□□□□□ -1.69
HMG20A-205ENST00000558651 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.52□□□□□ -1.69
HMG20A-205ENST00000558651 ADAMTS20P59510 1910 aa4.51□□□□□ -1.69
HMG20A-205ENST00000558651 C7orf72A4D263 438 aa4.51□□□□□ -1.69
HMG20A-205ENST00000558651 MYO1BO43795 1136 aa4.51□□□□□ -1.69
HMG20A-205ENST00000558651 NTRK1P04629 796 aa4.51□□□□□ -1.69
HMG20A-205ENST00000558651 EFEMP1Q12805 493 aa4.51□□□□□ -1.69
HMG20A-205ENST00000558651 IQCEQ6IPM2 695 aa4.51□□□□□ -1.69
HMG20A-205ENST00000558651 BORAQ6PGQ7 559 aa4.51□□□□□ -1.69
HMG20A-205ENST00000558651 BVESQ8NE79 360 aa4.51□□□□□ -1.69
HMG20A-205ENST00000558651 RASGRP4Q8TDF6 673 aa4.51□□□□□ -1.69
HMG20A-205ENST00000558651 POLR3GLQ9BT43 218 aa4.51□□□□□ -1.69
HMG20A-205ENST00000558651 MTA3Q9BTC8 594 aa4.51□□□□□ -1.69
HMG20A-205ENST00000558651 CLEC1BQ9P126 229 aa4.51□□□□□ -1.69
HMG20A-205ENST00000558651 STRIP2Q9ULQ0 834 aa4.51□□□□□ -1.69
HMG20A-205ENST00000558651 PLA2G2DQ9UNK4 145 aa4.51□□□□□ -1.69
HMG20A-205ENST00000558651 NOBOXO60393 691 aa4.5□□□□□ -1.69
HMG20A-205ENST00000558651 PLS3P13797 630 aa4.5□□□□□ -1.69
HMG20A-205ENST00000558651 INSRRP14616 1297 aa4.5□□□□□ -1.69
HMG20A-205ENST00000558651 VAMP1P23763 118 aa4.5□□□□□ -1.69
HMG20A-205ENST00000558651 ZNF143P52747 638 aaPredicted RBP4.5□□□□□ -1.69
HMG20A-205ENST00000558651 SCRN1Q12765 414 aa4.5□□□□□ -1.69
HMG20A-205ENST00000558651 SMAD4Q13485 552 aaKnown RBP4.5□□□□□ -1.69
HMG20A-205ENST00000558651 PUM1Q14671 1186 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMG20A-205ENST00000558651 NCAPHQ15003 741 aa4.5□□□□□ -1.69
HMG20A-205ENST00000558651 CD300LDQ6UXZ3 194 aa4.5□□□□□ -1.69
HMG20A-205ENST00000558651 NT5DC4Q86YG4 428 aa4.5□□□□□ -1.69
HMG20A-205ENST00000558651 TTLL6Q8N841 843 aa4.5□□□□□ -1.69
HMG20A-205ENST00000558651 SEC14L1Q92503 715 aa4.5□□□□□ -1.69
HMG20A-205ENST00000558651 SEC16BQ96JE7 1060 aa4.5□□□□□ -1.69
HMG20A-205ENST00000558651 LNPKQ9C0E8 428 aa4.5□□□□□ -1.69
HMG20A-205ENST00000558651 NGRNQ9NPE2 291 aaKnown RBP4.5□□□□□ -1.69
HMG20A-205ENST00000558651 LRP2BPQ9P2M1 347 aa4.5□□□□□ -1.69
HMG20A-205ENST00000558651 ZNF536O15090 1300 aa4.49□□□□□ -1.69
HMG20A-205ENST00000558651 C22orf46C9J442 243 aa4.49□□□□□ -1.69
HMG20A-205ENST00000558651 RECKO95980 971 aa4.49□□□□□ -1.69
HMG20A-205ENST00000558651 GTF2A2P52657 109 aa4.49□□□□□ -1.69
HMG20A-205ENST00000558651 CASP7P55210 303 aa4.49□□□□□ -1.69
HMG20A-205ENST00000558651 RPL11P62913 178 aaKnown RBP4.49□□□□□ -1.69
HMG20A-205ENST00000558651 HHIPL2Q6UWX4 724 aa4.49□□□□□ -1.69
HMG20A-205ENST00000558651 GGNQ86UU5 652 aa4.49□□□□□ -1.69
HMG20A-205ENST00000558651 LGI4Q8N135 537 aa4.49□□□□□ -1.69
HMG20A-205ENST00000558651 CHST13Q8NET6 341 aa4.49□□□□□ -1.69
HMG20A-205ENST00000558651 KLHL6Q8WZ60 621 aa4.49□□□□□ -1.69
HMG20A-205ENST00000558651 ANAPC16Q96DE5 110 aa4.49□□□□□ -1.69
HMG20A-205ENST00000558651 MMP19Q99542 508 aa4.49□□□□□ -1.69
HMG20A-205ENST00000558651 CCSER2Q9H7U1 834 aa4.49□□□□□ -1.69
HMG20A-205ENST00000558651 GPRC5CQ9NQ84 441 aa4.49□□□□□ -1.69
HMG20A-205ENST00000558651 SMPD4Q9NXE4 827 aa4.49□□□□□ -1.69
HMG20A-205ENST00000558651 INPP5FQ9Y2H2 1132 aa4.49□□□□□ -1.69
HMG20A-205ENST00000558651 COA3Q9Y2R0 106 aaPredicted RBP4.49□□□□□ -1.69
HMG20A-205ENST00000558651 EMC9Q9Y3B6 208 aa4.49□□□□□ -1.69
HMG20A-205ENST00000558651 THBDP07204 575 aa4.48□□□□□ -1.69
HMG20A-205ENST00000558651 NFKB2Q00653 900 aa4.48□□□□□ -1.69
HMG20A-205ENST00000558651 CHRNA2Q15822 529 aa4.48□□□□□ -1.69
HMG20A-205ENST00000558651 RGL3Q3MIN7 710 aa4.48□□□□□ -1.69
HMG20A-205ENST00000558651 MROH9Q5TGP6 573 aa4.48□□□□□ -1.69
HMG20A-205ENST00000558651 MILR1Q7Z6M3 343 aa4.48□□□□□ -1.69
HMG20A-205ENST00000558651 ZNF761Q86XN6 746 aaPredicted RBP4.48□□□□□ -1.69
HMG20A-205ENST00000558651 VPS37DQ86XT2 251 aa4.48□□□□□ -1.69
HMG20A-205ENST00000558651 TEX2Q8IWB9 1127 aa4.48□□□□□ -1.69
HMG20A-205ENST00000558651 DHX37Q8IY37 1157 aaKnown RBP4.48□□□□□ -1.69
HMG20A-205ENST00000558651 FAM9AQ8IZU1 332 aaPredicted RBP4.48□□□□□ -1.69
HMG20A-205ENST00000558651 KYQ8NBH2 561 aa4.48□□□□□ -1.69
HMG20A-205ENST00000558651 ADAMTS17Q8TE56 1095 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms