RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 SIAH1Q8IUQ4 282 aa15.97■□□□□ 0.15
TMEM260-215ENST00000557626 CPXCR1Q8N123 301 aa15.97■□□□□ 0.15
TMEM260-215ENST00000557626 MIGA1Q8NAN2 632 aa15.97■□□□□ 0.15
TMEM260-215ENST00000557626 SNRKQ9NRH2 765 aa15.97■□□□□ 0.15
TMEM260-215ENST00000557626 CSPG5O95196 566 aa15.96■□□□□ 0.15
TMEM260-215ENST00000557626 UQCRFS1P1P0C7P4 283 aa15.96■□□□□ 0.15
TMEM260-215ENST00000557626 CYP7A1P22680 504 aa15.96■□□□□ 0.15
TMEM260-215ENST00000557626 COASYQ13057 564 aa15.96■□□□□ 0.15
TMEM260-215ENST00000557626 PTGISQ16647 500 aa15.96■□□□□ 0.15
TMEM260-215ENST00000557626 PPP4R3CPQ6ZMV5 832 aa15.96■□□□□ 0.15
TMEM260-215ENST00000557626 EEPD1Q7L9B9 569 aa15.96■□□□□ 0.15
TMEM260-215ENST00000557626 FBXO16Q8IX29 292 aaPredicted RBP15.96■□□□□ 0.15
TMEM260-215ENST00000557626 FAM133AQ8N9E0 248 aa15.96■□□□□ 0.15
TMEM260-215ENST00000557626 SLF1Q9BQI6 1058 aa15.96■□□□□ 0.15
TMEM260-215ENST00000557626 COPRSQ9NQ92 184 aa15.96■□□□□ 0.15
TMEM260-215ENST00000557626 CTDP1Q9Y5B0 961 aaPredicted RBP15.96■□□□□ 0.15
TMEM260-215ENST00000557626 FLNBO75369 2602 aaKnown RBP15.95■□□□□ 0.14
TMEM260-215ENST00000557626 CTNNB1P35222 781 aa15.95■□□□□ 0.14
TMEM260-215ENST00000557626 TAPT1Q6NXT6 567 aa15.95■□□□□ 0.14
TMEM260-215ENST00000557626 CHST13Q8NET6 341 aa15.95■□□□□ 0.14
TMEM260-215ENST00000557626 HAUS7Q99871 368 aa15.95■□□□□ 0.14
TMEM260-215ENST00000557626 GOPCQ9HD26 462 aa15.95■□□□□ 0.14
TMEM260-215ENST00000557626 CLEC1BQ9P126 229 aa15.95■□□□□ 0.14
TMEM260-215ENST00000557626 ATP2A1O14983 1001 aa15.94■□□□□ 0.14
TMEM260-215ENST00000557626 ANGPT1Q15389 498 aa15.94■□□□□ 0.14
TMEM260-215ENST00000557626 KIAA1211Q6ZU35 1233 aa15.94■□□□□ 0.14
TMEM260-215ENST00000557626 PPP2R3CQ969Q6 453 aa15.94■□□□□ 0.14
TMEM260-215ENST00000557626 C11orf84Q9BUA3 381 aaPredicted RBP15.94■□□□□ 0.14
TMEM260-215ENST00000557626 MFSD1Q9H3U5 465 aa15.94■□□□□ 0.14
TMEM260-215ENST00000557626 USP17L12C9JPN9 530 aa15.93■□□□□ 0.14
TMEM260-215ENST00000557626 USP17L21D6R901 530 aa15.93■□□□□ 0.14
TMEM260-215ENST00000557626 E9PSI1 815 aa15.93■□□□□ 0.14
TMEM260-215ENST00000557626 GRM6O15303 877 aa15.93■□□□□ 0.14
TMEM260-215ENST00000557626 MTMR3Q13615 1198 aa15.93■□□□□ 0.14
TMEM260-215ENST00000557626 DUSP28Q4G0W2 176 aa15.93■□□□□ 0.14
TMEM260-215ENST00000557626 BRDTQ58F21 947 aaPredicted RBP15.93■□□□□ 0.14
TMEM260-215ENST00000557626 UBALD2Q8IYN6 164 aa15.93■□□□□ 0.14
TMEM260-215ENST00000557626 KREMEN2Q8NCW0 462 aa15.93■□□□□ 0.14
TMEM260-215ENST00000557626 CYP2W1Q8TAV3 490 aa15.93■□□□□ 0.14
TMEM260-215ENST00000557626 RAVER2Q9HCJ3 691 aaKnown RBP15.93■□□□□ 0.14
TMEM260-215ENST00000557626 DDX49Q9Y6V7 483 aaKnown RBP15.93■□□□□ 0.14
TMEM260-215ENST00000557626 ZBED4O75132 1171 aa15.92■□□□□ 0.14
TMEM260-215ENST00000557626 CKBP12277 381 aa15.92■□□□□ 0.14
TMEM260-215ENST00000557626 AKR1B1P15121 316 aa15.92■□□□□ 0.14
TMEM260-215ENST00000557626 ATF7P17544 494 aaPredicted RBP15.92■□□□□ 0.14
TMEM260-215ENST00000557626 SDHBP21912 280 aa15.92■□□□□ 0.14
TMEM260-215ENST00000557626 CLCN5P51795 746 aa15.92■□□□□ 0.14
TMEM260-215ENST00000557626 CHMP4BP1P59074 171 aa15.92■□□□□ 0.14
TMEM260-215ENST00000557626 EVX2Q03828 476 aa15.92■□□□□ 0.14
TMEM260-215ENST00000557626 RUBCNQ92622 972 aa15.92■□□□□ 0.14
TMEM260-215ENST00000557626 HOMER2Q9NSB8 354 aa15.92■□□□□ 0.14
TMEM260-215ENST00000557626 COG6Q9Y2V7 657 aa15.92■□□□□ 0.14
TMEM260-215ENST00000557626 C5orf67F2Z3F1 127 aa15.91■□□□□ 0.14
TMEM260-215ENST00000557626 IGSF3O75054 1194 aa15.91■□□□□ 0.14
TMEM260-215ENST00000557626 CYP2E1P05181 493 aaPredicted RBP15.91■□□□□ 0.14
TMEM260-215ENST00000557626 RB1P06400 928 aa15.91■□□□□ 0.14
TMEM260-215ENST00000557626 ADRB1P08588 477 aa15.91■□□□□ 0.14
TMEM260-215ENST00000557626 UBTFL1P0CB47 393 aaPredicted RBP15.91■□□□□ 0.14
TMEM260-215ENST00000557626 EEF2P13639 858 aaKnown RBP15.91■□□□□ 0.14
TMEM260-215ENST00000557626 RBL2Q08999 1139 aa15.91■□□□□ 0.14
TMEM260-215ENST00000557626 OR6J1Q8NGC5 347 aa15.91■□□□□ 0.14
TMEM260-215ENST00000557626 DHX38Q92620 1227 aaKnown RBP15.91■□□□□ 0.14
TMEM260-215ENST00000557626 VTA1Q9NP79 307 aa15.91■□□□□ 0.14
TMEM260-215ENST00000557626 BARX2Q9UMQ3 279 aaPredicted RBP15.91■□□□□ 0.14
TMEM260-215ENST00000557626 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.91■□□□□ 0.14
TMEM260-215ENST00000557626 MYO10Q9HD67 2058 aa15.91■□□□□ 0.14
TMEM260-215ENST00000557626 GCN1Q92616 2671 aaKnown RBP15.91■□□□□ 0.14
TMEM260-215ENST00000557626 ZZEF1O43149 2961 aa15.9■□□□□ 0.14
TMEM260-215ENST00000557626 LGR5O75473 907 aa15.9■□□□□ 0.14
TMEM260-215ENST00000557626 UPP2O95045 317 aa15.9■□□□□ 0.14
TMEM260-215ENST00000557626 ATXN1P54253 815 aaKnown RBP15.9■□□□□ 0.14
TMEM260-215ENST00000557626 DMWDQ09019 674 aa15.9■□□□□ 0.14
TMEM260-215ENST00000557626 DCLK2Q8N568 766 aa15.9■□□□□ 0.14
TMEM260-215ENST00000557626 EFHBQ8N7U6 833 aa15.9■□□□□ 0.14
TMEM260-215ENST00000557626 PRPF38AQ8NAV1 312 aaKnown RBP15.9■□□□□ 0.14
TMEM260-215ENST00000557626 CTAGE1Q96RT6 745 aa15.9■□□□□ 0.14
TMEM260-215ENST00000557626 SORCS3Q9UPU3 1222 aa15.9■□□□□ 0.14
TMEM260-215ENST00000557626 RAD50Q92878 1312 aa15.9■□□□□ 0.14
TMEM260-215ENST00000557626 RBAK-RBAKDNI3L0D1 243 aa15.89■□□□□ 0.13
TMEM260-215ENST00000557626 KPNA6O60684 536 aa15.89■□□□□ 0.13
TMEM260-215ENST00000557626 BRD1O95696 1058 aa15.89■□□□□ 0.13
TMEM260-215ENST00000557626 MMP1P03956 469 aa15.89■□□□□ 0.13
TMEM260-215ENST00000557626 TTC39AQ5SRH9 613 aa15.89■□□□□ 0.13
TMEM260-215ENST00000557626 GDF6Q6KF10 455 aaPredicted RBP15.89■□□□□ 0.13
TMEM260-215ENST00000557626 CCDC105Q8IYK2 499 aa15.89■□□□□ 0.13
TMEM260-215ENST00000557626 NUP88Q99567 741 aaPredicted RBP15.89■□□□□ 0.13
TMEM260-215ENST00000557626 WDR11Q9BZH6 1224 aa15.89■□□□□ 0.13
TMEM260-215ENST00000557626 ACAD9Q9H845 621 aa15.89■□□□□ 0.13
TMEM260-215ENST00000557626 MCM9Q9NXL9 1143 aa15.89■□□□□ 0.13
TMEM260-215ENST00000557626 SWAP70Q9UH65 585 aa15.89■□□□□ 0.13
TMEM260-215ENST00000557626 R4GN57 208 aa15.89■□□□□ 0.13
TMEM260-215ENST00000557626 SPEGQ15772 3267 aa15.89■□□□□ 0.13
TMEM260-215ENST00000557626 FRYQ5TBA9 3013 aa15.89■□□□□ 0.13
TMEM260-215ENST00000557626 BMPR1AP36894 532 aa15.88■□□□□ 0.13
TMEM260-215ENST00000557626 FIBCD1Q8N539 461 aa15.88■□□□□ 0.13
TMEM260-215ENST00000557626 SUSD6Q92537 303 aa15.88■□□□□ 0.13
TMEM260-215ENST00000557626 TOP1MTQ969P6 601 aa15.88■□□□□ 0.13
TMEM260-215ENST00000557626 A1CFQ9NQ94 594 aaKnown RBP15.88■□□□□ 0.13
TMEM260-215ENST00000557626 PIH1D3Q9NQM4 214 aaKnown RBP15.88■□□□□ 0.13
TMEM260-215ENST00000557626 RWDD3Q9Y3V2 267 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms