RNA–Protein interactions for RNA: ENST00000557510.5

NPC2-209, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 1 (best) BASIC

Gene NPC2, Length 1,029 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-209ENST00000557510 CD4P01730 458 aa10.66□□□□□ -0.7
NPC2-209ENST00000557510 PBX2P40425 430 aa10.66□□□□□ -0.7
NPC2-209ENST00000557510 PSMC6P62333 389 aa10.66□□□□□ -0.7
NPC2-209ENST00000557510 AAMPQ13685 434 aa10.66□□□□□ -0.7
NPC2-209ENST00000557510 BAATQ14032 418 aaPredicted RBP10.66□□□□□ -0.7
NPC2-209ENST00000557510 GRIN2CQ14957 1233 aa10.66□□□□□ -0.7
NPC2-209ENST00000557510 FSCN1Q16658 493 aaKnown RBP10.66□□□□□ -0.7
NPC2-209ENST00000557510 TMEM132AQ24JP5 1023 aa10.66□□□□□ -0.7
NPC2-209ENST00000557510 MCMDC2Q4G0Z9 681 aa10.66□□□□□ -0.7
NPC2-209ENST00000557510 TMEM240Q5SV17 173 aa10.66□□□□□ -0.7
NPC2-209ENST00000557510 SYDE2Q5VT97 1194 aa10.66□□□□□ -0.7
NPC2-209ENST00000557510 BTNL9Q6UXG8 535 aa10.66□□□□□ -0.7
NPC2-209ENST00000557510 SLC30A10Q6XR72 485 aa10.66□□□□□ -0.7
NPC2-209ENST00000557510 SLC43A3Q8NBI5 491 aa10.66□□□□□ -0.7
NPC2-209ENST00000557510 MAFAQ8NHW3 353 aaPredicted RBP10.66□□□□□ -0.7
NPC2-209ENST00000557510 CPVLQ9H3G5 476 aa10.66□□□□□ -0.7
NPC2-209ENST00000557510 SPC25Q9HBM1 224 aa10.66□□□□□ -0.7
NPC2-209ENST00000557510 SCN10AQ9Y5Y9 1956 aa10.66□□□□□ -0.7
NPC2-209ENST00000557510 NEDD4P46934 1319 aa10.65□□□□□ -0.7
NPC2-209ENST00000557510 MROH7Q68CQ1 1323 aa10.65□□□□□ -0.7
NPC2-209ENST00000557510 CCDC171Q6TFL3 1326 aa10.65□□□□□ -0.7
NPC2-209ENST00000557510 TRIP12Q14669 1992 aaPredicted RBP10.65□□□□□ -0.7
NPC2-209ENST00000557510 PDHBP11177 359 aa10.65□□□□□ -0.7
NPC2-209ENST00000557510 TOP1P11387 765 aaKnown RBP10.65□□□□□ -0.7
NPC2-209ENST00000557510 FOSL2P15408 326 aa10.65□□□□□ -0.7
NPC2-209ENST00000557510 FECHP22830 423 aa10.65□□□□□ -0.7
NPC2-209ENST00000557510 DNAJB2P25686 324 aa10.65□□□□□ -0.7
NPC2-209ENST00000557510 RASIP1Q5U651 963 aa10.65□□□□□ -0.7
NPC2-209ENST00000557510 ZNF365Q70YC5 407 aa10.65□□□□□ -0.7
NPC2-209ENST00000557510 USP38Q8NB14 1042 aa10.65□□□□□ -0.7
NPC2-209ENST00000557510 TET1Q8NFU7 2136 aa10.65□□□□□ -0.7
NPC2-209ENST00000557510 MORC4Q8TE76 937 aa10.65□□□□□ -0.7
NPC2-209ENST00000557510 PPP1R13LQ8WUF5 828 aa10.65□□□□□ -0.7
NPC2-209ENST00000557510 CLEC4DQ8WXI8 215 aa10.65□□□□□ -0.7
NPC2-209ENST00000557510 TRPV6Q9H1D0 765 aa10.65□□□□□ -0.7
NPC2-209ENST00000557510 PCDHGA10Q9Y5H3 936 aa10.65□□□□□ -0.7
NPC2-209ENST00000557510 NCOR1O75376 2440 aa10.65□□□□□ -0.71
NPC2-209ENST00000557510 ZMYM6O95789 1325 aa10.64□□□□□ -0.71
NPC2-209ENST00000557510 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.64□□□□□ -0.71
NPC2-209ENST00000557510 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.64□□□□□ -0.71
NPC2-209ENST00000557510 TRIM6-TRIM34B2RNG4 842 aa10.64□□□□□ -0.71
NPC2-209ENST00000557510 RBAK-RBAKDNI3L0D1 243 aa10.64□□□□□ -0.71
NPC2-209ENST00000557510 B4GALT4O60513 344 aa10.64□□□□□ -0.71
NPC2-209ENST00000557510 IGHDP01880 384 aa10.64□□□□□ -0.71
NPC2-209ENST00000557510 ALDH5A1P51649 535 aaPredicted RBP10.64□□□□□ -0.71
NPC2-209ENST00000557510 ZNF543Q08ER8 600 aa10.64□□□□□ -0.71
NPC2-209ENST00000557510 PPIGQ13427 754 aaKnown RBP eCLIP10.64□□□□□ -0.71
NPC2-209ENST00000557510 ITGA7Q13683 1181 aa10.64□□□□□ -0.71
NPC2-209ENST00000557510 PPP4R3BQ5MIZ7 849 aa10.64□□□□□ -0.71
NPC2-209ENST00000557510 SMC5Q8IY18 1101 aa10.64□□□□□ -0.71
NPC2-209ENST00000557510 RILPL2Q969X0 211 aa10.64□□□□□ -0.71
NPC2-209ENST00000557510 VWCEQ96DN2 955 aa10.64□□□□□ -0.71
NPC2-209ENST00000557510 ZKSCAN3Q9BRR0 538 aa10.64□□□□□ -0.71
NPC2-209ENST00000557510 PBX4Q9BYU1 374 aa10.64□□□□□ -0.71
NPC2-209ENST00000557510 WNT8AQ9H1J5 351 aa10.64□□□□□ -0.71
NPC2-209ENST00000557510 VTA1Q9NP79 307 aa10.64□□□□□ -0.71
NPC2-209ENST00000557510 TCP11L1Q9NUJ3 509 aa10.64□□□□□ -0.71
NPC2-209ENST00000557510 CXXC1Q9P0U4 656 aaPredicted RBP10.64□□□□□ -0.71
NPC2-209ENST00000557510 BAZ2BQ9UIF8 2168 aaKnown RBP10.64□□□□□ -0.71
NPC2-209ENST00000557510 CHD9Q3L8U1 2897 aa10.64□□□□□ -0.71
NPC2-209ENST00000557510 KIAA1217Q5T5P2 1943 aa10.64□□□□□ -0.71
NPC2-209ENST00000557510 SPTBN5Q9NRC6 3674 aaKnown RBP10.63□□□□□ -0.71
NPC2-209ENST00000557510 PTPDC1A2A3K4 754 aa10.63□□□□□ -0.71
NPC2-209ENST00000557510 TRIM66O15016 1216 aa10.63□□□□□ -0.71
NPC2-209ENST00000557510 GOLGA8HP0CJ92 632 aa10.63□□□□□ -0.71
NPC2-209ENST00000557510 SNHG28P0DPA3 235 aa10.63□□□□□ -0.71
NPC2-209ENST00000557510 SDSP20132 328 aa10.63□□□□□ -0.71
NPC2-209ENST00000557510 CALML3P27482 149 aa10.63□□□□□ -0.71
NPC2-209ENST00000557510 PTGDRQ13258 359 aa10.63□□□□□ -0.71
NPC2-209ENST00000557510 AKNAD1Q5T1N1 836 aa10.63□□□□□ -0.71
NPC2-209ENST00000557510 IQSEC1Q6DN90 963 aa10.63□□□□□ -0.71
NPC2-209ENST00000557510 KIAA1211Q6ZU35 1233 aa10.63□□□□□ -0.71
NPC2-209ENST00000557510 PLEKHM2Q8IWE5 1019 aa10.63□□□□□ -0.71
NPC2-209ENST00000557510 KHSRPQ92945 711 aaKnown RBP eCLIP10.63□□□□□ -0.71
NPC2-209ENST00000557510 TIFAQ96CG3 184 aa10.63□□□□□ -0.71
NPC2-209ENST00000557510 NOC4LQ9BVI4 516 aaKnown RBP10.63□□□□□ -0.71
NPC2-209ENST00000557510 AP5M1Q9H0R1 490 aa10.63□□□□□ -0.71
NPC2-209ENST00000557510 ZNF576Q9H609 170 aa10.63□□□□□ -0.71
NPC2-209ENST00000557510 TMEM265A0A087WTH1 108 aa10.62□□□□□ -0.71
NPC2-209ENST00000557510 TLR3O15455 904 aaKnown RBP10.62□□□□□ -0.71
NPC2-209ENST00000557510 CCL23P55773 120 aa10.62□□□□□ -0.71
NPC2-209ENST00000557510 RPS6P62753 249 aaKnown RBP10.62□□□□□ -0.71
NPC2-209ENST00000557510 DUSP28Q4G0W2 176 aa10.62□□□□□ -0.71
NPC2-209ENST00000557510 MFSD6Q6ZSS7 791 aa10.62□□□□□ -0.71
NPC2-209ENST00000557510 TMEM199Q8N511 208 aa10.62□□□□□ -0.71
NPC2-209ENST00000557510 TBC1D5Q92609 795 aa10.62□□□□□ -0.71
NPC2-209ENST00000557510 COPS5Q92905 334 aa10.62□□□□□ -0.71
NPC2-209ENST00000557510 WDR11Q9BZH6 1224 aa10.62□□□□□ -0.71
NPC2-209ENST00000557510 IL25Q9H293 177 aa10.62□□□□□ -0.71
NPC2-209ENST00000557510 HIPK3Q9H422 1215 aa10.62□□□□□ -0.71
NPC2-209ENST00000557510 CDHR5Q9HBB8 845 aa10.62□□□□□ -0.71
NPC2-209ENST00000557510 IL23AQ9NPF7 189 aa10.62□□□□□ -0.71
NPC2-209ENST00000557510 PRDM6Q9NQX0 595 aa10.62□□□□□ -0.71
NPC2-209ENST00000557510 NPDC1Q9NQX5 325 aaPredicted RBP10.62□□□□□ -0.71
NPC2-209ENST00000557510 TRMT13Q9NUP7 481 aaKnown RBP10.62□□□□□ -0.71
NPC2-209ENST00000557510 MYH7BA7E2Y1 1941 aa10.62□□□□□ -0.71
NPC2-209ENST00000557510 TANC1Q9C0D5 1861 aa10.61□□□□□ -0.71
NPC2-209ENST00000557510 PRRC2BQ5JSZ5 2229 aaKnown RBP10.61□□□□□ -0.71
NPC2-209ENST00000557510 CHD7Q9P2D1 2997 aa10.61□□□□□ -0.71
NPC2-209ENST00000557510 PTPRSQ13332 1948 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms