RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 GOPCQ9HD26 462 aa11.4□□□□□ -0.58
NEDD1-211ENST00000557454 GPHNQ9NQX3 736 aaPredicted RBP11.4□□□□□ -0.58
NEDD1-211ENST00000557454 HOMER2Q9NSB8 354 aa11.4□□□□□ -0.58
NEDD1-211ENST00000557454 FBXO40Q9UH90 709 aa11.4□□□□□ -0.58
NEDD1-211ENST00000557454 USP15Q9Y4E8 981 aaPredicted RBP11.4□□□□□ -0.58
NEDD1-211ENST00000557454 SCN10AQ9Y5Y9 1956 aa11.39□□□□□ -0.59
NEDD1-211ENST00000557454 ATP2A1O14983 1001 aa11.39□□□□□ -0.59
NEDD1-211ENST00000557454 CYP2D6P10635 497 aa11.39□□□□□ -0.59
NEDD1-211ENST00000557454 HOXB3P14651 431 aaPredicted RBP11.39□□□□□ -0.59
NEDD1-211ENST00000557454 ZAP70P43403 619 aa11.39□□□□□ -0.59
NEDD1-211ENST00000557454 CPT1AP50416 773 aa11.39□□□□□ -0.59
NEDD1-211ENST00000557454 CHMP4BP1P59074 171 aa11.39□□□□□ -0.59
NEDD1-211ENST00000557454 ADAM15Q13444 863 aa11.39□□□□□ -0.59
NEDD1-211ENST00000557454 TTC39AQ5SRH9 613 aa11.39□□□□□ -0.59
NEDD1-211ENST00000557454 KIAA1211Q6ZU35 1233 aa11.39□□□□□ -0.59
NEDD1-211ENST00000557454 ZBTB33Q86T24 672 aa11.39□□□□□ -0.59
NEDD1-211ENST00000557454 CERS3Q8IU89 383 aa11.39□□□□□ -0.59
NEDD1-211ENST00000557454 MRPL50Q8N5N7 158 aaKnown RBP11.39□□□□□ -0.59
NEDD1-211ENST00000557454 CHST13Q8NET6 341 aa11.39□□□□□ -0.59
NEDD1-211ENST00000557454 YME1L1Q96TA2 773 aa11.39□□□□□ -0.59
NEDD1-211ENST00000557454 CLEC1BQ9P126 229 aa11.39□□□□□ -0.59
NEDD1-211ENST00000557454 ZBTB47Q9UFB7 747 aaPredicted RBP11.39□□□□□ -0.59
NEDD1-211ENST00000557454 CTDP1Q9Y5B0 961 aaPredicted RBP11.39□□□□□ -0.59
NEDD1-211ENST00000557454 PCDHGC5Q9Y5F6 944 aa11.39□□□□□ -0.59
NEDD1-211ENST00000557454 OTOGLQ3ZCN5 2332 aa11.38□□□□□ -0.59
NEDD1-211ENST00000557454 PTPRCP08575 1304 aa11.38□□□□□ -0.59
NEDD1-211ENST00000557454 GRM6O15303 877 aa11.38□□□□□ -0.59
NEDD1-211ENST00000557454 IDH1O75874 414 aaKnown RBP11.38□□□□□ -0.59
NEDD1-211ENST00000557454 AMHP03971 560 aa11.38□□□□□ -0.59
NEDD1-211ENST00000557454 CTNNB1P35222 781 aa11.38□□□□□ -0.59
NEDD1-211ENST00000557454 PTPN11Q06124 597 aaPredicted RBP11.38□□□□□ -0.59
NEDD1-211ENST00000557454 DUSP28Q4G0W2 176 aa11.38□□□□□ -0.59
NEDD1-211ENST00000557454 MCM9Q9NXL9 1143 aa11.38□□□□□ -0.59
NEDD1-211ENST00000557454 SALL2Q9Y467 1007 aaPredicted RBP11.38□□□□□ -0.59
NEDD1-211ENST00000557454 ATG2AQ2TAZ0 1938 aa11.38□□□□□ -0.59
NEDD1-211ENST00000557454 SETXQ7Z333 2677 aaKnown RBP11.38□□□□□ -0.59
NEDD1-211ENST00000557454 ZFYVE26Q68DK2 2539 aa11.38□□□□□ -0.59
NEDD1-211ENST00000557454 ASPMQ8IZT6 3477 aa11.37□□□□□ -0.59
NEDD1-211ENST00000557454 ZBED4O75132 1171 aa11.37□□□□□ -0.59
NEDD1-211ENST00000557454 PARNO95453 639 aaKnown RBP11.37□□□□□ -0.59
NEDD1-211ENST00000557454 LMNAP02545 664 aaKnown RBP11.37□□□□□ -0.59
NEDD1-211ENST00000557454 CKBP12277 381 aa11.37□□□□□ -0.59
NEDD1-211ENST00000557454 COASYQ13057 564 aa11.37□□□□□ -0.59
NEDD1-211ENST00000557454 MBTPS1Q14703 1052 aa11.37□□□□□ -0.59
NEDD1-211ENST00000557454 RSPO4Q2I0M5 234 aaPredicted RBP11.37□□□□□ -0.59
NEDD1-211ENST00000557454 ASTLQ6HA08 431 aaPredicted RBP11.37□□□□□ -0.59
NEDD1-211ENST00000557454 GDF6Q6KF10 455 aaPredicted RBP11.37□□□□□ -0.59
NEDD1-211ENST00000557454 WDR63Q8IWG1 891 aa11.37□□□□□ -0.59
NEDD1-211ENST00000557454 OR6J1Q8NGC5 347 aa11.37□□□□□ -0.59
NEDD1-211ENST00000557454 HINFPQ9BQA5 517 aa11.37□□□□□ -0.59
NEDD1-211ENST00000557454 LMAN2LQ9H0V9 348 aa11.37□□□□□ -0.59
NEDD1-211ENST00000557454 VTA1Q9NP79 307 aa11.37□□□□□ -0.59
NEDD1-211ENST00000557454 A1CFQ9NQ94 594 aaKnown RBP11.37□□□□□ -0.59
NEDD1-211ENST00000557454 COG6Q9Y2V7 657 aa11.37□□□□□ -0.59
NEDD1-211ENST00000557454 NAV1Q8NEY1 1877 aa11.36□□□□□ -0.59
NEDD1-211ENST00000557454 USP17L12C9JPN9 530 aa11.36□□□□□ -0.59
NEDD1-211ENST00000557454 USP17L21D6R901 530 aa11.36□□□□□ -0.59
NEDD1-211ENST00000557454 LGR5O75473 907 aa11.36□□□□□ -0.59
NEDD1-211ENST00000557454 RBL2Q08999 1139 aa11.36□□□□□ -0.59
NEDD1-211ENST00000557454 PRPF38AQ8NAV1 312 aaKnown RBP11.36□□□□□ -0.59
NEDD1-211ENST00000557454 KIFC2Q96AC6 838 aa11.36□□□□□ -0.59
NEDD1-211ENST00000557454 RIOK1Q9BRS2 568 aaKnown RBP11.36□□□□□ -0.59
NEDD1-211ENST00000557454 WDR11Q9BZH6 1224 aa11.36□□□□□ -0.59
NEDD1-211ENST00000557454 ACAD9Q9H845 621 aa11.36□□□□□ -0.59
NEDD1-211ENST00000557454 SLC38A10Q9HBR0 1119 aa11.36□□□□□ -0.59
NEDD1-211ENST00000557454 SWAP70Q9UH65 585 aa11.36□□□□□ -0.59
NEDD1-211ENST00000557454 BARX2Q9UMQ3 279 aaPredicted RBP11.36□□□□□ -0.59
NEDD1-211ENST00000557454 MYO5AQ9Y4I1 1855 aaKnown RBP11.36□□□□□ -0.59
NEDD1-211ENST00000557454 TRIP12Q14669 1992 aaPredicted RBP11.36□□□□□ -0.59
NEDD1-211ENST00000557454 SRGAP3O43295 1099 aa11.35□□□□□ -0.59
NEDD1-211ENST00000557454 IGSF3O75054 1194 aa11.35□□□□□ -0.59
NEDD1-211ENST00000557454 UPP2O95045 317 aa11.35□□□□□ -0.59
NEDD1-211ENST00000557454 TRAF7Q6Q0C0 670 aa11.35□□□□□ -0.59
NEDD1-211ENST00000557454 KREMEN2Q8NCW0 462 aa11.35□□□□□ -0.59
NEDD1-211ENST00000557454 DBNDD2Q9BQY9 259 aa11.35□□□□□ -0.59
NEDD1-211ENST00000557454 C11orf84Q9BUA3 381 aaPredicted RBP11.35□□□□□ -0.59
NEDD1-211ENST00000557454 MICAL3Q7RTP6 2002 aa11.35□□□□□ -0.59
NEDD1-211ENST00000557454 C5orf67F2Z3F1 127 aa11.34□□□□□ -0.59
NEDD1-211ENST00000557454 GLP2RO95838 553 aa11.34□□□□□ -0.59
NEDD1-211ENST00000557454 SP100P23497 879 aaPredicted RBP11.34□□□□□ -0.59
NEDD1-211ENST00000557454 ANGPT1Q15389 498 aa11.34□□□□□ -0.59
NEDD1-211ENST00000557454 BRDTQ58F21 947 aaPredicted RBP11.34□□□□□ -0.59
NEDD1-211ENST00000557454 CCDC158Q5M9N0 1113 aa11.34□□□□□ -0.59
NEDD1-211ENST00000557454 ADGRD2Q7Z7M1 963 aa11.34□□□□□ -0.59
NEDD1-211ENST00000557454 DBF4BQ8NFT6 615 aa11.34□□□□□ -0.59
NEDD1-211ENST00000557454 SDR42E1Q8WUS8 393 aa11.34□□□□□ -0.59
NEDD1-211ENST00000557454 CCDC17Q96LX7 622 aa11.34□□□□□ -0.59
NEDD1-211ENST00000557454 SMOC2Q9H3U7 446 aa11.34□□□□□ -0.59
NEDD1-211ENST00000557454 KANSL2Q9H9L4 492 aa11.34□□□□□ -0.59
NEDD1-211ENST00000557454 RNF146Q9NTX7 359 aa11.34□□□□□ -0.59
NEDD1-211ENST00000557454 BRD1O95696 1058 aa11.33□□□□□ -0.6
NEDD1-211ENST00000557454 NDUFB10O96000 172 aa11.33□□□□□ -0.6
NEDD1-211ENST00000557454 MMP1P03956 469 aa11.33□□□□□ -0.6
NEDD1-211ENST00000557454 LINC00271P0C7V0 271 aa11.33□□□□□ -0.6
NEDD1-211ENST00000557454 ARP10275 920 aa11.33□□□□□ -0.6
NEDD1-211ENST00000557454 ZNF618Q5T7W0 954 aa11.33□□□□□ -0.6
NEDD1-211ENST00000557454 DCLK2Q8N568 766 aa11.33□□□□□ -0.6
NEDD1-211ENST00000557454 EFHBQ8N7U6 833 aa11.33□□□□□ -0.6
NEDD1-211ENST00000557454 CYP2W1Q8TAV3 490 aa11.33□□□□□ -0.6
NEDD1-211ENST00000557454 SUSD6Q92537 303 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms