RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 MYO5BQ9ULV0 1848 aa5.46□□□□□ -1.53
SYNE2-223ENST00000557005 USP17L12C9JPN9 530 aa5.46□□□□□ -1.53
SYNE2-223ENST00000557005 USP17L21D6R901 530 aa5.46□□□□□ -1.53
SYNE2-223ENST00000557005 FLOT1O75955 427 aa5.46□□□□□ -1.53
SYNE2-223ENST00000557005 TMED2Q15363 201 aa5.46□□□□□ -1.53
SYNE2-223ENST00000557005 RASGRP2Q7LDG7 609 aa5.46□□□□□ -1.53
SYNE2-223ENST00000557005 PACS2Q86VP3 889 aa5.46□□□□□ -1.53
SYNE2-223ENST00000557005 ENGASEQ8NFI3 743 aa5.46□□□□□ -1.53
SYNE2-223ENST00000557005 KIFC2Q96AC6 838 aa5.46□□□□□ -1.53
SYNE2-223ENST00000557005 IQCDQ96DY2 449 aa5.46□□□□□ -1.53
SYNE2-223ENST00000557005 DHTKD1Q96HY7 919 aaPredicted RBP5.46□□□□□ -1.53
SYNE2-223ENST00000557005 PRMT1Q99873 361 aaKnown RBP5.46□□□□□ -1.53
SYNE2-223ENST00000557005 FUT8Q9BYC5 575 aa5.46□□□□□ -1.53
SYNE2-223ENST00000557005 SEC31BQ9NQW1 1179 aa5.46□□□□□ -1.53
SYNE2-223ENST00000557005 ARPP21Q9UBL0 812 aaPredicted RBP5.46□□□□□ -1.53
SYNE2-223ENST00000557005 USH1CQ9Y6N9 552 aa5.46□□□□□ -1.53
SYNE2-223ENST00000557005 TARSL2A2RTX5 802 aaKnown RBP5.46□□□□□ -1.54
SYNE2-223ENST00000557005 HMGB1P1B2RPK0 211 aaPredicted RBP5.46□□□□□ -1.54
SYNE2-223ENST00000557005 EIF3HO15372 352 aaKnown RBP eCLIP5.46□□□□□ -1.54
SYNE2-223ENST00000557005 LDHCP07864 332 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 ANTXR2P58335 489 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 ADAM9Q13443 819 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 TSGA10IPQ3SY00 556 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 ILDR1Q86SU0 546 aaPredicted RBP5.46□□□□□ -1.54
SYNE2-223ENST00000557005 SETDB2Q96T68 719 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 CHP1Q99653 195 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 SYNCQ9H7C4 482 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 HDAC9Q9UKV0 1011 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 AGTPBP1Q9UPW5 1226 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 NEURL4Q96JN8 1562 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 STK36Q9NRP7 1315 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 CETN3O15182 167 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 SORBS3O60504 671 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 GUCY2CP25092 1073 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 RPL13P26373 211 aaKnown RBP5.46□□□□□ -1.54
SYNE2-223ENST00000557005 ERVK-24P63145 666 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 PLCB3Q01970 1234 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 TAF11Q15544 211 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 MUM1L1Q5H9M0 696 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 ATG9AQ7Z3C6 839 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 NOA1Q8NC60 698 aaKnown RBP5.46□□□□□ -1.54
SYNE2-223ENST00000557005 OR2W6PQ8NHA6 318 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 DDX12PQ92771 950 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 PSMD1Q99460 953 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 DISC1Q9NRI5 854 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 EHD2Q9NZN4 543 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 INTUQ9ULD6 942 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 HPS5Q9UPZ3 1129 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 PCDHB13Q9Y5F0 798 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 NPHP3-ACAD11A0A0J9YXS1 232 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 LGALS16A8MUM7 142 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 CD44P16070 742 aaKnown RBP5.46□□□□□ -1.54
SYNE2-223ENST00000557005 HNRNPH1P31943 449 aaKnown RBP5.46□□□□□ -1.54
SYNE2-223ENST00000557005 ADCY8P40145 1251 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 PLTPP55058 493 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 CORO7P57737 925 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 NEK8Q86SG6 692 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 MCUR1Q96AQ8 359 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 DYNLL2Q96FJ2 89 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.46□□□□□ -1.54
SYNE2-223ENST00000557005 PSD3Q9NYI0 1048 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 PARP2Q9UGN5 583 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 TBK1Q9UHD2 729 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 CDHR2Q9BYE9 1310 aa5.46□□□□□ -1.54
SYNE2-223ENST00000557005 GFPT2O94808 682 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 PCCAP05165 728 aaPredicted RBP5.45□□□□□ -1.54
SYNE2-223ENST00000557005 MMEP08473 750 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 MAGOHP61326 146 aaKnown RBP5.45□□□□□ -1.54
SYNE2-223ENST00000557005 DR1Q01658 176 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 UBE2SQ16763 222 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 MAGOHBQ96A72 148 aaKnown RBP5.45□□□□□ -1.54
SYNE2-223ENST00000557005 GBP5Q96PP8 586 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 ANKRD2Q9GZV1 360 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 NUCKS1Q9H1E3 243 aaKnown RBP5.45□□□□□ -1.54
SYNE2-223ENST00000557005 EPN3Q9H201 632 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 L2HGDHQ9H9P8 463 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 FAM114A2Q9NRY5 505 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 INTS9Q9NV88 658 aaKnown RBP5.45□□□□□ -1.54
SYNE2-223ENST00000557005 OVOS2A0A0J9YW53 1432 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 NCAPD2Q15021 1401 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 OVOS2Q6IE36 1432 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.45□□□□□ -1.54
SYNE2-223ENST00000557005 TTC26A0AVF1 554 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 MEIS1O00470 390 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 BACH1O14867 736 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 CLGNO14967 610 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 CLIC2O15247 247 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 THAP12O43422 761 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 LUC7L3O95232 432 aaKnown RBP5.45□□□□□ -1.54
SYNE2-223ENST00000557005 CYP2D6P10635 497 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 FCER1AP12319 257 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 PTPREP23469 700 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 MYL7Q01449 175 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 SCARF1Q14162 830 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 CCDC93Q567U6 631 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 PPP4R3AQ6IN85 833 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 DPP8Q6V1X1 898 aaPredicted RBP5.45□□□□□ -1.54
SYNE2-223ENST00000557005 RNF207Q6ZRF8 634 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 SYNE4Q8N205 404 aa5.45□□□□□ -1.54
SYNE2-223ENST00000557005 MARCH10Q8NA82 808 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms