RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 ARIH2O95376 493 aa12□□□□□ -0.49
SNX6-208ENST00000556712 HMGB1P09429 215 aaKnown RBP12□□□□□ -0.49
SNX6-208ENST00000556712 RPS6KB1P23443 525 aa12□□□□□ -0.49
SNX6-208ENST00000556712 CST5P28325 142 aaPredicted RBP12□□□□□ -0.49
SNX6-208ENST00000556712 GNAQP50148 359 aa12□□□□□ -0.49
SNX6-208ENST00000556712 GHRHRQ02643 423 aa12□□□□□ -0.49
SNX6-208ENST00000556712 SNX17Q15036 470 aa12□□□□□ -0.49
SNX6-208ENST00000556712 PWP2Q15269 919 aaKnown RBP12□□□□□ -0.49
SNX6-208ENST00000556712 RTN1Q16799 776 aa12□□□□□ -0.49
SNX6-208ENST00000556712 ARHGEF16Q5VV41 709 aa12□□□□□ -0.49
SNX6-208ENST00000556712 SYNE3Q6ZMZ3 975 aa12□□□□□ -0.49
SNX6-208ENST00000556712 FCHSD1Q86WN1 690 aa12□□□□□ -0.49
SNX6-208ENST00000556712 IL31RAQ8NI17 732 aa12□□□□□ -0.49
SNX6-208ENST00000556712 COPS5Q92905 334 aa12□□□□□ -0.49
SNX6-208ENST00000556712 GPKOWQ92917 476 aaPredicted RBP eCLIP12□□□□□ -0.49
SNX6-208ENST00000556712 BRF1Q92994 677 aa12□□□□□ -0.49
SNX6-208ENST00000556712 ZFP91Q96JP5 570 aaPredicted RBP12□□□□□ -0.49
SNX6-208ENST00000556712 RMDN3Q96TC7 470 aa12□□□□□ -0.49
SNX6-208ENST00000556712 WDR11Q9BZH6 1224 aa12□□□□□ -0.49
SNX6-208ENST00000556712 SPC25Q9HBM1 224 aa12□□□□□ -0.49
SNX6-208ENST00000556712 PXMP2Q9NR77 195 aa12□□□□□ -0.49
SNX6-208ENST00000556712 DOCK5Q9H7D0 1870 aa12□□□□□ -0.49
SNX6-208ENST00000556712 DYNC1LI2O43237 492 aaPredicted RBP11.99□□□□□ -0.49
SNX6-208ENST00000556712 ASGR1P07306 291 aa11.99□□□□□ -0.49
SNX6-208ENST00000556712 CDC27P30260 824 aa11.99□□□□□ -0.49
SNX6-208ENST00000556712 PPP2R5BQ15173 497 aa11.99□□□□□ -0.49
SNX6-208ENST00000556712 DUSP28Q4G0W2 176 aa11.99□□□□□ -0.49
SNX6-208ENST00000556712 GNASQ5JWF2 1037 aa11.99□□□□□ -0.49
SNX6-208ENST00000556712 IQSEC1Q6DN90 963 aa11.99□□□□□ -0.49
SNX6-208ENST00000556712 SEPT14Q6ZU15 432 aa11.99□□□□□ -0.49
SNX6-208ENST00000556712 OR6J1Q8NGC5 347 aa11.99□□□□□ -0.49
SNX6-208ENST00000556712 NSUN6Q8TEA1 469 aaKnown RBP11.99□□□□□ -0.49
SNX6-208ENST00000556712 MPHOSPH6Q99547 160 aaKnown RBP11.99□□□□□ -0.49
SNX6-208ENST00000556712 LZTS2Q9BRK4 669 aa11.99□□□□□ -0.49
SNX6-208ENST00000556712 AP5M1Q9H0R1 490 aa11.99□□□□□ -0.49
SNX6-208ENST00000556712 PRDM5Q9NQX1 630 aaPredicted RBP11.99□□□□□ -0.49
SNX6-208ENST00000556712 STARD7Q9NQZ5 370 aa11.99□□□□□ -0.49
SNX6-208ENST00000556712 FAM217BQ9NTX9 383 aaPredicted RBP11.99□□□□□ -0.49
SNX6-208ENST00000556712 RBM28Q9NW13 759 aaKnown RBP11.99□□□□□ -0.49
SNX6-208ENST00000556712 RBM47A0AV96 593 aaKnown RBP11.98□□□□□ -0.49
SNX6-208ENST00000556712 MOXD2PA6NHM9 499 aa11.98□□□□□ -0.49
SNX6-208ENST00000556712 GCOM1H8Y6P7 765 aaPredicted RBP11.98□□□□□ -0.49
SNX6-208ENST00000556712 PQBP1O60828 265 aaKnown RBP11.98□□□□□ -0.49
SNX6-208ENST00000556712 POLR2MP0CAP2 368 aa11.98□□□□□ -0.49
SNX6-208ENST00000556712 MYCLP12524 364 aaPredicted RBP11.98□□□□□ -0.49
SNX6-208ENST00000556712 SMARCA1P28370 1054 aa11.98□□□□□ -0.49
SNX6-208ENST00000556712 METAP2P50579 478 aaKnown RBP eCLIP11.98□□□□□ -0.49
SNX6-208ENST00000556712 PGM5Q15124 567 aa11.98□□□□□ -0.49
SNX6-208ENST00000556712 FSCN1Q16658 493 aaKnown RBP11.98□□□□□ -0.49
SNX6-208ENST00000556712 USP17L6PQ6QN14 398 aa11.98□□□□□ -0.49
SNX6-208ENST00000556712 CXCL17Q6UXB2 119 aa11.98□□□□□ -0.49
SNX6-208ENST00000556712 HEATR3Q7Z4Q2 680 aa11.98□□□□□ -0.49
SNX6-208ENST00000556712 PDCD2LQ9BRP1 358 aa11.98□□□□□ -0.49
SNX6-208ENST00000556712 TSEN34Q9BSV6 310 aaKnown RBP11.98□□□□□ -0.49
SNX6-208ENST00000556712 UPF3BQ9BZI7 483 aaKnown RBP11.98□□□□□ -0.49
SNX6-208ENST00000556712 MAF1Q9H063 256 aa11.98□□□□□ -0.49
SNX6-208ENST00000556712 PDLIM7Q9NR12 457 aa11.98□□□□□ -0.49
SNX6-208ENST00000556712 RBM27Q9P2N5 1060 aaKnown RBP11.98□□□□□ -0.49
SNX6-208ENST00000556712 MYH7BA7E2Y1 1941 aa11.98□□□□□ -0.49
SNX6-208ENST00000556712 B4DLN1 442 aa11.97□□□□□ -0.49
SNX6-208ENST00000556712 EPB41L2O43491 1005 aaKnown RBP11.97□□□□□ -0.49
SNX6-208ENST00000556712 SORBS3O60504 671 aa11.97□□□□□ -0.49
SNX6-208ENST00000556712 PPFIA3O75145 1194 aa11.97□□□□□ -0.49
SNX6-208ENST00000556712 NR3C2P08235 984 aa11.97□□□□□ -0.49
SNX6-208ENST00000556712 TXNP10599 105 aaKnown RBP11.97□□□□□ -0.49
SNX6-208ENST00000556712 PSMA5P28066 241 aa11.97□□□□□ -0.49
SNX6-208ENST00000556712 ADD1P35611 737 aaKnown RBP11.97□□□□□ -0.49
SNX6-208ENST00000556712 MAGEA10P43363 369 aaPredicted RBP11.97□□□□□ -0.49
SNX6-208ENST00000556712 MRPL12P52815 198 aaKnown RBP11.97□□□□□ -0.49
SNX6-208ENST00000556712 NKX3-2P78367 333 aa11.97□□□□□ -0.49
SNX6-208ENST00000556712 MDM2Q00987 491 aaPredicted RBP11.97□□□□□ -0.49
SNX6-208ENST00000556712 TLE2Q04725 743 aa11.97□□□□□ -0.49
SNX6-208ENST00000556712 FUT2Q10981 343 aa11.97□□□□□ -0.49
SNX6-208ENST00000556712 TRAF1Q13077 416 aa11.97□□□□□ -0.49
SNX6-208ENST00000556712 TOB2Q14106 344 aaPredicted RBP11.97□□□□□ -0.49
SNX6-208ENST00000556712 STXBP2Q15833 593 aa11.97□□□□□ -0.49
SNX6-208ENST00000556712 UBE2SQ16763 222 aa11.97□□□□□ -0.49
SNX6-208ENST00000556712 LY6KQ17RY6 165 aa11.97□□□□□ -0.49
SNX6-208ENST00000556712 HABP4Q5JVS0 413 aaKnown RBP11.97□□□□□ -0.49
SNX6-208ENST00000556712 WWC2Q6AWC2 1192 aa11.97□□□□□ -0.49
SNX6-208ENST00000556712 TYW1BQ6NUM6 668 aa11.97□□□□□ -0.49
SNX6-208ENST00000556712 SH3RF1Q7Z6J0 888 aa11.97□□□□□ -0.49
SNX6-208ENST00000556712 PCSK9Q8NBP7 692 aaKnown RBP11.97□□□□□ -0.49
SNX6-208ENST00000556712 SCFD2Q8WU76 684 aa11.97□□□□□ -0.49
SNX6-208ENST00000556712 GLT1D1Q96MS3 346 aa11.97□□□□□ -0.49
SNX6-208ENST00000556712 LARP6Q9BRS8 491 aaKnown RBP11.97□□□□□ -0.49
SNX6-208ENST00000556712 NID2Q14112 1375 aa11.96□□□□□ -0.49
SNX6-208ENST00000556712 FRMPD4Q14CM0 1322 aa11.96□□□□□ -0.49
SNX6-208ENST00000556712 TRIM43BA6NCK2 446 aa11.96□□□□□ -0.49
SNX6-208ENST00000556712 MEIS2O14770 477 aa11.96□□□□□ -0.49
SNX6-208ENST00000556712 RGS20O76081 388 aa11.96□□□□□ -0.49
SNX6-208ENST00000556712 PSMC6P62333 389 aa11.96□□□□□ -0.49
SNX6-208ENST00000556712 TTLL4Q14679 1199 aa11.96□□□□□ -0.49
SNX6-208ENST00000556712 C1orf53Q5VUE5 145 aa11.96□□□□□ -0.49
SNX6-208ENST00000556712 RUFY3Q7L099 469 aa11.96□□□□□ -0.49
SNX6-208ENST00000556712 SMARCC2Q8TAQ2 1214 aa11.96□□□□□ -0.49
SNX6-208ENST00000556712 PPP1R13LQ8WUF5 828 aa11.96□□□□□ -0.49
SNX6-208ENST00000556712 VTI1AQ96AJ9 217 aa11.96□□□□□ -0.49
SNX6-208ENST00000556712 TRIM43Q96BQ3 446 aaPredicted RBP11.96□□□□□ -0.49
SNX6-208ENST00000556712 IWS1Q96ST2 819 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms