RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 MYH7BA7E2Y1 1941 aa12.31□□□□□ -0.44
SPTLC2-205ENST00000556607 RBM47A0AV96 593 aaKnown RBP12.3□□□□□ -0.44
SPTLC2-205ENST00000556607 E7EWF7 191 aa12.3□□□□□ -0.44
SPTLC2-205ENST00000556607 EIF2AK2P19525 551 aaKnown RBP12.3□□□□□ -0.44
SPTLC2-205ENST00000556607 SEC23AQ15436 765 aa12.3□□□□□ -0.44
SPTLC2-205ENST00000556607 STXBP2Q15833 593 aa12.3□□□□□ -0.44
SPTLC2-205ENST00000556607 ZNF365Q70YC5 407 aa12.3□□□□□ -0.44
SPTLC2-205ENST00000556607 SYTL5Q8TDW5 730 aaPredicted RBP12.3□□□□□ -0.44
SPTLC2-205ENST00000556607 GUCD1Q96NT3 240 aa12.3□□□□□ -0.44
SPTLC2-205ENST00000556607 RMDN3Q96TC7 470 aa12.3□□□□□ -0.44
SPTLC2-205ENST00000556607 MTG1Q9BT17 334 aaPredicted RBP12.3□□□□□ -0.44
SPTLC2-205ENST00000556607 SEMA6BQ9H3T3 888 aa12.3□□□□□ -0.44
SPTLC2-205ENST00000556607 MAD2L2Q9UI95 211 aa12.3□□□□□ -0.44
SPTLC2-205ENST00000556607 PCDHA1Q9Y5I3 950 aa12.3□□□□□ -0.44
SPTLC2-205ENST00000556607 ZBTB5O15062 677 aa12.29□□□□□ -0.44
SPTLC2-205ENST00000556607 SGSM2O43147 1006 aa12.29□□□□□ -0.44
SPTLC2-205ENST00000556607 FGBP02675 491 aa12.29□□□□□ -0.44
SPTLC2-205ENST00000556607 SUPT20HL2P0C7V6 817 aa12.29□□□□□ -0.44
SPTLC2-205ENST00000556607 MYCLP12524 364 aaPredicted RBP12.29□□□□□ -0.44
SPTLC2-205ENST00000556607 EDNRBP24530 442 aa12.29□□□□□ -0.44
SPTLC2-205ENST00000556607 PURAQ00577 322 aaKnown RBP12.29□□□□□ -0.44
SPTLC2-205ENST00000556607 LY6KQ17RY6 165 aa12.29□□□□□ -0.44
SPTLC2-205ENST00000556607 TMEM67Q5HYA8 995 aa12.29□□□□□ -0.44
SPTLC2-205ENST00000556607 TMEM240Q5SV17 173 aa12.29□□□□□ -0.44
SPTLC2-205ENST00000556607 PSRC1Q6PGN9 363 aaPredicted RBP12.29□□□□□ -0.44
SPTLC2-205ENST00000556607 SLC43A3Q8NBI5 491 aa12.29□□□□□ -0.44
SPTLC2-205ENST00000556607 PPP1R13LQ8WUF5 828 aa12.29□□□□□ -0.44
SPTLC2-205ENST00000556607 PIBF1Q8WXW3 757 aa12.29□□□□□ -0.44
SPTLC2-205ENST00000556607 CDX2Q99626 313 aaPredicted RBP12.29□□□□□ -0.44
SPTLC2-205ENST00000556607 MTIF3Q9H2K0 278 aaKnown RBP12.29□□□□□ -0.44
SPTLC2-205ENST00000556607 IL23AQ9NPF7 189 aa12.29□□□□□ -0.44
SPTLC2-205ENST00000556607 TRMT13Q9NUP7 481 aaKnown RBP12.29□□□□□ -0.44
SPTLC2-205ENST00000556607 NOD1Q9Y239 953 aa12.29□□□□□ -0.44
SPTLC2-205ENST00000556607 GRIN2DO15399 1336 aa12.29□□□□□ -0.44
SPTLC2-205ENST00000556607 UMODL1Q5DID0 1318 aa12.29□□□□□ -0.44
SPTLC2-205ENST00000556607 KPNA6O60684 536 aa12.28□□□□□ -0.44
SPTLC2-205ENST00000556607 ARIH2O95376 493 aa12.28□□□□□ -0.44
SPTLC2-205ENST00000556607 GH1P01241 217 aa12.28□□□□□ -0.44
SPTLC2-205ENST00000556607 CYP2C9P11712 490 aa12.28□□□□□ -0.44
SPTLC2-205ENST00000556607 DNAJB2P25686 324 aa12.28□□□□□ -0.44
SPTLC2-205ENST00000556607 NBPF20Q3BBV1 942 aa12.28□□□□□ -0.44
SPTLC2-205ENST00000556607 CASC1Q6TDU7 716 aa12.28□□□□□ -0.44
SPTLC2-205ENST00000556607 NFXL1Q6ZNB6 911 aa12.28□□□□□ -0.44
SPTLC2-205ENST00000556607 CATIPQ7Z7H3 387 aa12.28□□□□□ -0.44
SPTLC2-205ENST00000556607 MYLIPQ8WY64 445 aa12.28□□□□□ -0.44
SPTLC2-205ENST00000556607 SCLYQ96I15 445 aa12.28□□□□□ -0.44
SPTLC2-205ENST00000556607 PIGSQ96S52 555 aa12.28□□□□□ -0.44
SPTLC2-205ENST00000556607 IWS1Q96ST2 819 aa12.28□□□□□ -0.44
SPTLC2-205ENST00000556607 MAF1Q9H063 256 aa12.28□□□□□ -0.44
SPTLC2-205ENST00000556607 ALDH8A1Q9H2A2 487 aaPredicted RBP12.28□□□□□ -0.44
SPTLC2-205ENST00000556607 COL20A1Q9P218 1284 aa12.28□□□□□ -0.44
SPTLC2-205ENST00000556607 RBM8AQ9Y5S9 174 aaKnown RBP12.28□□□□□ -0.44
SPTLC2-205ENST00000556607 LAMA3Q16787 3333 aa12.28□□□□□ -0.44
SPTLC2-205ENST00000556607 PALM3A6NDB9 673 aaPredicted RBP12.27□□□□□ -0.45
SPTLC2-205ENST00000556607 ZBBXA8MT70 800 aa12.27□□□□□ -0.45
SPTLC2-205ENST00000556607 GRXCR1A8MXD5 290 aa12.27□□□□□ -0.45
SPTLC2-205ENST00000556607 DLL1O00548 723 aa12.27□□□□□ -0.45
SPTLC2-205ENST00000556607 NR3C2P08235 984 aa12.27□□□□□ -0.45
SPTLC2-205ENST00000556607 FOSL2P15408 326 aa12.27□□□□□ -0.45
SPTLC2-205ENST00000556607 HOXA13P31271 388 aaPredicted RBP12.27□□□□□ -0.45
SPTLC2-205ENST00000556607 TRAF1Q13077 416 aa12.27□□□□□ -0.45
SPTLC2-205ENST00000556607 GRM4Q14833 912 aa12.27□□□□□ -0.45
SPTLC2-205ENST00000556607 C16orf59Q7L2K0 433 aa12.27□□□□□ -0.45
SPTLC2-205ENST00000556607 OTOP2Q7RTS6 562 aa12.27□□□□□ -0.45
SPTLC2-205ENST00000556607 FCHSD1Q86WN1 690 aa12.27□□□□□ -0.45
SPTLC2-205ENST00000556607 RPUSD2Q8IZ73 545 aaKnown RBP12.27□□□□□ -0.45
SPTLC2-205ENST00000556607 AFG1LQ8WV93 481 aa12.27□□□□□ -0.45
SPTLC2-205ENST00000556607 MAP4K1Q92918 833 aa12.27□□□□□ -0.45
SPTLC2-205ENST00000556607 NOC4LQ9BVI4 516 aaKnown RBP12.27□□□□□ -0.45
SPTLC2-205ENST00000556607 TTYH1Q9H313 450 aaPredicted RBP12.27□□□□□ -0.45
SPTLC2-205ENST00000556607 SENP2Q9HC62 589 aa12.27□□□□□ -0.45
SPTLC2-205ENST00000556607 PXMP2Q9NR77 195 aa12.27□□□□□ -0.45
SPTLC2-205ENST00000556607 MRVI1Q9Y6F6 885 aa12.27□□□□□ -0.45
SPTLC2-205ENST00000556607 TAF6LQ9Y6J9 622 aa12.27□□□□□ -0.45
SPTLC2-205ENST00000556607 GBF1Q92538 1859 aa12.27□□□□□ -0.45
SPTLC2-205ENST00000556607 A6NJR5 290 aa12.26□□□□□ -0.45
SPTLC2-205ENST00000556607 SORBS3O60504 671 aa12.26□□□□□ -0.45
SPTLC2-205ENST00000556607 PPP1R11O60927 126 aaPredicted RBP12.26□□□□□ -0.45
SPTLC2-205ENST00000556607 EIF3JO75822 258 aaKnown RBP12.26□□□□□ -0.45
SPTLC2-205ENST00000556607 CASTP20810 708 aaKnown RBP12.26□□□□□ -0.45
SPTLC2-205ENST00000556607 STOX1Q6ZVD7 989 aa12.26□□□□□ -0.45
SPTLC2-205ENST00000556607 DEFB128Q7Z7B8 93 aa12.26□□□□□ -0.45
SPTLC2-205ENST00000556607 DHX37Q8IY37 1157 aaKnown RBP12.26□□□□□ -0.45
SPTLC2-205ENST00000556607 RETREG2Q8NC44 543 aa12.26□□□□□ -0.45
SPTLC2-205ENST00000556607 CTCFLQ8NI51 663 aaPredicted RBP12.26□□□□□ -0.45
SPTLC2-205ENST00000556607 TIFAQ96CG3 184 aa12.26□□□□□ -0.45
SPTLC2-205ENST00000556607 MAP3K20Q9NYL2 800 aaKnown RBP12.26□□□□□ -0.45
SPTLC2-205ENST00000556607 MSRAQ9UJ68 235 aa12.26□□□□□ -0.45
SPTLC2-205ENST00000556607 SCN5AQ14524 2016 aa12.26□□□□□ -0.45
SPTLC2-205ENST00000556607 TMEM265A0A087WTH1 108 aa12.25□□□□□ -0.45
SPTLC2-205ENST00000556607 PNMA6FA0A0J9YX94 578 aa12.25□□□□□ -0.45
SPTLC2-205ENST00000556607 CCDC69A6NI79 296 aa12.25□□□□□ -0.45
SPTLC2-205ENST00000556607 GCOM1H8Y6P7 765 aaPredicted RBP12.25□□□□□ -0.45
SPTLC2-205ENST00000556607 PRC1O43663 620 aa12.25□□□□□ -0.45
SPTLC2-205ENST00000556607 MMP3P08254 477 aa12.25□□□□□ -0.45
SPTLC2-205ENST00000556607 POLR2MP0CAP2 368 aa12.25□□□□□ -0.45
SPTLC2-205ENST00000556607 HSD17B4P51659 736 aa12.25□□□□□ -0.45
SPTLC2-205ENST00000556607 DGKDQ16760 1214 aa12.25□□□□□ -0.45
SPTLC2-205ENST00000556607 NFRKBQ6P4R8 1299 aa12.25□□□□□ -0.45
SPTLC2-205ENST00000556607 CCDC62Q6P9F0 684 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms