RNA–Protein interactions for RNA: ENST00000555949.2

SLC25A29-213, Transcript of solute carrier family 25 member 29, human

TSL 4

Gene SLC25A29, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC25A29-213	ENST00000555949	LRRC2	Q9BYS8	371 aa		32.66	■■■□□ 2.82
SLC25A29-213	ENST00000555949	RIOX1	Q9H6W3	641 aa		32.66	■■■□□ 2.82
SLC25A29-213	ENST00000555949	SHH	Q15465	462 aa		32.65	■■■□□ 2.82
SLC25A29-213	ENST00000555949	C9orf50	Q5SZB4	431 aa		32.65	■■■□□ 2.82
SLC25A29-213	ENST00000555949	ARHGEF16	Q5VV41	709 aa		32.65	■■■□□ 2.82
SLC25A29-213	ENST00000555949	ZNF654	Q8IZM8	581 aa		32.65	■■■□□ 2.82
SLC25A29-213	ENST00000555949	NSUN6	Q8TEA1	469 aa	Known RBP	32.65	■■■□□ 2.82
SLC25A29-213	ENST00000555949	MROH7	Q68CQ1	1323 aa		32.65	■■■□□ 2.82
SLC25A29-213	ENST00000555949	LAMA3	Q16787	3333 aa		32.65	■■■□□ 2.82
SLC25A29-213	ENST00000555949	MYL3	P08590	195 aa		32.64	■■■□□ 2.82
SLC25A29-213	ENST00000555949	SEPT14	Q6ZU15	432 aa		32.64	■■■□□ 2.82
SLC25A29-213	ENST00000555949	RAB11FIP4	Q86YS3	637 aa		32.64	■■■□□ 2.82
SLC25A29-213	ENST00000555949	SCFD2	Q8WU76	684 aa		32.64	■■■□□ 2.82
SLC25A29-213	ENST00000555949	CDC45	O75419	566 aa		32.63	■■■□□ 2.81
SLC25A29-213	ENST00000555949	ARIH2	O95376	493 aa		32.63	■■■□□ 2.81
SLC25A29-213	ENST00000555949	TXN	P10599	105 aa	Known RBP	32.63	■■■□□ 2.81
SLC25A29-213	ENST00000555949	HOXA13	P31271	388 aa	Predicted RBP	32.63	■■■□□ 2.81
SLC25A29-213	ENST00000555949	ITGA7	Q13683	1181 aa		32.63	■■■□□ 2.81
SLC25A29-213	ENST00000555949	FAM126B	Q8IXS8	530 aa		32.63	■■■□□ 2.81
SLC25A29-213	ENST00000555949	SH2B2	O14492	632 aa	Predicted RBP	32.62	■■■□□ 2.81
SLC25A29-213	ENST00000555949	CABYR	O75952	493 aa		32.62	■■■□□ 2.81
SLC25A29-213	ENST00000555949	RXRA	P19793	462 aa		32.62	■■■□□ 2.81
SLC25A29-213	ENST00000555949	GRIN2D	O15399	1336 aa		32.61	■■■□□ 2.81
SLC25A29-213	ENST00000555949	CCDC69	A6NI79	296 aa		32.61	■■■□□ 2.81
SLC25A29-213	ENST00000555949	TLR3	O15455	904 aa	Known RBP	32.61	■■■□□ 2.81
SLC25A29-213	ENST00000555949	EPHB4	P54760	987 aa		32.61	■■■□□ 2.81
SLC25A29-213	ENST00000555949	CTCFL	Q8NI51	663 aa	Predicted RBP	32.61	■■■□□ 2.81
SLC25A29-213	ENST00000555949	TMEM87B	Q96K49	555 aa		32.61	■■■□□ 2.81
SLC25A29-213	ENST00000555949	PPP1R12C	Q9BZL4	782 aa		32.61	■■■□□ 2.81
SLC25A29-213	ENST00000555949	PXMP2	Q9NR77	195 aa		32.61	■■■□□ 2.81
SLC25A29-213	ENST00000555949	TBX21	Q9UL17	535 aa		32.61	■■■□□ 2.81
SLC25A29-213	ENST00000555949	PNMA6F	A0A0J9YX94	578 aa		32.6	■■■□□ 2.81
SLC25A29-213	ENST00000555949	HSD17B4	P51659	736 aa		32.6	■■■□□ 2.81
SLC25A29-213	ENST00000555949	TTLL4	Q14679	1199 aa		32.6	■■■□□ 2.81
SLC25A29-213	ENST00000555949	STXBP2	Q15833	593 aa		32.6	■■■□□ 2.81
SLC25A29-213	ENST00000555949	PPP1R13L	Q8WUF5	828 aa		32.6	■■■□□ 2.81
SLC25A29-213	ENST00000555949	MAF1	Q9H063	256 aa		32.6	■■■□□ 2.81
SLC25A29-213	ENST00000555949	DDAH1	O94760	285 aa		32.59	■■■□□ 2.81
SLC25A29-213	ENST00000555949	CPT1A	P50416	773 aa		32.59	■■■□□ 2.81
SLC25A29-213	ENST00000555949	FPGS	Q05932	587 aa		32.59	■■■□□ 2.81
SLC25A29-213	ENST00000555949	LY6K	Q17RY6	165 aa		32.59	■■■□□ 2.81
SLC25A29-213	ENST00000555949		Q7L0L9	218 aa		32.59	■■■□□ 2.81
SLC25A29-213	ENST00000555949	IWS1	Q96ST2	819 aa		32.59	■■■□□ 2.81
SLC25A29-213	ENST00000555949	NKRF	O15226	690 aa	Known RBP eCLIP	32.58	■■■□□ 2.81
SLC25A29-213	ENST00000555949	TIMP1	P01033	207 aa		32.58	■■■□□ 2.81
SLC25A29-213	ENST00000555949	NR3C2	P08235	984 aa		32.58	■■■□□ 2.81
SLC25A29-213	ENST00000555949	MYCL	P12524	364 aa	Predicted RBP	32.58	■■■□□ 2.81
SLC25A29-213	ENST00000555949	RNF20	Q5VTR2	975 aa		32.58	■■■□□ 2.81
SLC25A29-213	ENST00000555949	FCHSD1	Q86WN1	690 aa		32.58	■■■□□ 2.81
SLC25A29-213	ENST00000555949	CMTR1	Q8N1G2	835 aa	Known RBP	32.58	■■■□□ 2.81
SLC25A29-213	ENST00000555949	SLC43A3	Q8NBI5	491 aa		32.58	■■■□□ 2.81
SLC25A29-213	ENST00000555949	POLR3E	Q9NVU0	708 aa		32.58	■■■□□ 2.81
SLC25A29-213	ENST00000555949	PLEKHA8P1	O95397	391 aa		32.57	■■■□□ 2.8
SLC25A29-213	ENST00000555949	KIF5B	P33176	963 aa		32.57	■■■□□ 2.8
SLC25A29-213	ENST00000555949	ZFP91	Q96JP5	570 aa	Predicted RBP	32.57	■■■□□ 2.8
SLC25A29-213	ENST00000555949	TCEANC2	Q96MN5	208 aa		32.57	■■■□□ 2.8
SLC25A29-213	ENST00000555949	MTA3	Q9BTC8	594 aa		32.57	■■■□□ 2.8
SLC25A29-213	ENST00000555949	TRPV6	Q9H1D0	765 aa		32.57	■■■□□ 2.8
SLC25A29-213	ENST00000555949	SCN10A	Q9Y5Y9	1956 aa		32.56	■■■□□ 2.8
SLC25A29-213	ENST00000555949	CD4	P01730	458 aa		32.56	■■■□□ 2.8
SLC25A29-213	ENST00000555949	PURA	Q00577	322 aa	Known RBP	32.56	■■■□□ 2.8
SLC25A29-213	ENST00000555949	CCDC62	Q6P9F0	684 aa		32.56	■■■□□ 2.8
SLC25A29-213	ENST00000555949	TMTC2	Q8N394	836 aa		32.56	■■■□□ 2.8
SLC25A29-213	ENST00000555949	GCOM1	H8Y6P7	765 aa	Predicted RBP	32.55	■■■□□ 2.8
SLC25A29-213	ENST00000555949	NEFL	P07196	543 aa		32.55	■■■□□ 2.8
SLC25A29-213	ENST00000555949	POLR2M	P0CAP2	368 aa		32.55	■■■□□ 2.8
SLC25A29-213	ENST00000555949	CHMP4BP1	P59074	171 aa		32.55	■■■□□ 2.8
SLC25A29-213	ENST00000555949	BRDT	Q58F21	947 aa	Predicted RBP	32.55	■■■□□ 2.8
SLC25A29-213	ENST00000555949	RASEF	Q8IZ41	740 aa		32.55	■■■□□ 2.8
SLC25A29-213	ENST00000555949	DEFB123	Q8N688	67 aa		32.55	■■■□□ 2.8
SLC25A29-213	ENST00000555949	NEK1	Q96PY6	1258 aa		32.55	■■■□□ 2.8
SLC25A29-213	ENST00000555949	MAP3K14	Q99558	947 aa		32.55	■■■□□ 2.8
SLC25A29-213	ENST00000555949	B4GALT4	O60513	344 aa		32.54	■■■□□ 2.8
SLC25A29-213	ENST00000555949	CYP2C18	P33260	490 aa		32.54	■■■□□ 2.8
SLC25A29-213	ENST00000555949	GHRHR	Q02643	423 aa		32.54	■■■□□ 2.8
SLC25A29-213	ENST00000555949	TRAF1	Q13077	416 aa		32.54	■■■□□ 2.8
SLC25A29-213	ENST00000555949	SRBD1	Q8N5C6	995 aa	Known RBP	32.54	■■■□□ 2.8
SLC25A29-213	ENST00000555949	IL31RA	Q8NI17	732 aa		32.54	■■■□□ 2.8
SLC25A29-213	ENST00000555949	RRP36	Q96EU6	259 aa	Known RBP	32.54	■■■□□ 2.8
SLC25A29-213	ENST00000555949	PDCD2L	Q9BRP1	358 aa		32.54	■■■□□ 2.8
SLC25A29-213	ENST00000555949	MTG1	Q9BT17	334 aa	Predicted RBP	32.54	■■■□□ 2.8
SLC25A29-213	ENST00000555949	SPZ1	Q9BXG8	430 aa		32.54	■■■□□ 2.8
SLC25A29-213	ENST00000555949	SLC12A7	Q9Y666	1083 aa		32.54	■■■□□ 2.8
SLC25A29-213	ENST00000555949	DOCK5	Q9H7D0	1870 aa		32.54	■■■□□ 2.8
SLC25A29-213	ENST00000555949	EIF3J	O75822	258 aa	Known RBP	32.53	■■■□□ 2.8
SLC25A29-213	ENST00000555949	LIFR	P42702	1097 aa		32.53	■■■□□ 2.8
SLC25A29-213	ENST00000555949	ADCK5	Q3MIX3	580 aa		32.53	■■■□□ 2.8
SLC25A29-213	ENST00000555949	MFSD5	Q6N075	450 aa		32.53	■■■□□ 2.8
SLC25A29-213	ENST00000555949	CCDC82	Q8N4S0	544 aa		32.53	■■■□□ 2.8
SLC25A29-213	ENST00000555949	AFG1L	Q8WV93	481 aa		32.53	■■■□□ 2.8
SLC25A29-213	ENST00000555949	MAP3K20	Q9NYL2	800 aa	Known RBP	32.53	■■■□□ 2.8
SLC25A29-213	ENST00000555949	SORBS3	O60504	671 aa		32.52	■■■□□ 2.8
SLC25A29-213	ENST00000555949	GH1	P01241	217 aa		32.52	■■■□□ 2.8
SLC25A29-213	ENST00000555949	PGM5	Q15124	567 aa		32.52	■■■□□ 2.8
SLC25A29-213	ENST00000555949	FAM47C	Q5HY64	1035 aa		32.52	■■■□□ 2.8
SLC25A29-213	ENST00000555949	RNPC3	Q96LT9	517 aa	Known RBP	32.52	■■■□□ 2.8
SLC25A29-213	ENST00000555949	MRVI1	Q9Y6F6	885 aa		32.52	■■■□□ 2.8
SLC25A29-213	ENST00000555949	UMODL1	Q5DID0	1318 aa		32.51	■■■□□ 2.8
SLC25A29-213	ENST00000555949	hCG_1642624	A0A1W2PR95	340 aa		32.51	■■■□□ 2.79
SLC25A29-213	ENST00000555949		A6NJR5	290 aa		32.51	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms