RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 PHF24Q9UPV7 400 aa14.38□□□□□ -0.11
TRAPPC6B-205ENST00000555269 COLQQ9Y215 455 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC6B-205ENST00000555269 KLF18A0A0U1RQI7 1052 aa14.37□□□□□ -0.11
TRAPPC6B-205ENST00000555269 CD44P16070 742 aaKnown RBP14.37□□□□□ -0.11
TRAPPC6B-205ENST00000555269 EIF2AK2P19525 551 aaKnown RBP14.37□□□□□ -0.11
TRAPPC6B-205ENST00000555269 CASTP20810 708 aaKnown RBP14.37□□□□□ -0.11
TRAPPC6B-205ENST00000555269 RPS6KB1P23443 525 aa14.37□□□□□ -0.11
TRAPPC6B-205ENST00000555269 HSD17B4P51659 736 aa14.37□□□□□ -0.11
TRAPPC6B-205ENST00000555269 ACLYP53396 1101 aa14.37□□□□□ -0.11
TRAPPC6B-205ENST00000555269 FGD1P98174 961 aa14.37□□□□□ -0.11
TRAPPC6B-205ENST00000555269 ARHGEF16Q5VV41 709 aa14.37□□□□□ -0.11
TRAPPC6B-205ENST00000555269 TMTC3Q6ZXV5 915 aa14.37□□□□□ -0.11
TRAPPC6B-205ENST00000555269 FCHSD1Q86WN1 690 aa14.37□□□□□ -0.11
TRAPPC6B-205ENST00000555269 NSUN6Q8TEA1 469 aaKnown RBP14.37□□□□□ -0.11
TRAPPC6B-205ENST00000555269 BRF1Q92994 677 aa14.37□□□□□ -0.11
TRAPPC6B-205ENST00000555269 ZFP91Q96JP5 570 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC6B-205ENST00000555269 UPF3AQ9H1J1 476 aaKnown RBP14.37□□□□□ -0.11
TRAPPC6B-205ENST00000555269 FAM217BQ9NTX9 383 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC6B-205ENST00000555269 ATP11BQ9Y2G3 1177 aa14.37□□□□□ -0.11
TRAPPC6B-205ENST00000555269 MCM3APO60318 1980 aa14.36□□□□□ -0.11
TRAPPC6B-205ENST00000555269 CEP290O15078 2479 aa14.36□□□□□ -0.11
TRAPPC6B-205ENST00000555269 RBM47A0AV96 593 aaKnown RBP14.36□□□□□ -0.11
TRAPPC6B-205ENST00000555269 GCOM1H8Y6P7 765 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC6B-205ENST00000555269 ZBTB43O43298 467 aa14.36□□□□□ -0.11
TRAPPC6B-205ENST00000555269 POLR2MP0CAP2 368 aa14.36□□□□□ -0.11
TRAPPC6B-205ENST00000555269 PSMA5P28066 241 aa14.36□□□□□ -0.11
TRAPPC6B-205ENST00000555269 CDC27P30260 824 aa14.36□□□□□ -0.11
TRAPPC6B-205ENST00000555269 RTP1P59025 263 aa14.36□□□□□ -0.11
TRAPPC6B-205ENST00000555269 SEPT14Q6ZU15 432 aa14.36□□□□□ -0.11
TRAPPC6B-205ENST00000555269 COPS5Q92905 334 aa14.36□□□□□ -0.11
TRAPPC6B-205ENST00000555269 LARP6Q9BRS8 491 aaKnown RBP14.36□□□□□ -0.11
TRAPPC6B-205ENST00000555269 TSEN34Q9BSV6 310 aaKnown RBP14.36□□□□□ -0.11
TRAPPC6B-205ENST00000555269 MAF1Q9H063 256 aa14.36□□□□□ -0.11
TRAPPC6B-205ENST00000555269 PXMP2Q9NR77 195 aa14.36□□□□□ -0.11
TRAPPC6B-205ENST00000555269 LOC102724159A0A0B4J2E5 919 aa14.35□□□□□ -0.11
TRAPPC6B-205ENST00000555269 A0A1W2PQ45 241 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC6B-205ENST00000555269 A0A1W2PQY0 241 aa14.35□□□□□ -0.11
TRAPPC6B-205ENST00000555269 ARIH2O95376 493 aa14.35□□□□□ -0.11
TRAPPC6B-205ENST00000555269 SEC24BO95487 1268 aa14.35□□□□□ -0.11
TRAPPC6B-205ENST00000555269 ASGR1P07306 291 aa14.35□□□□□ -0.11
TRAPPC6B-205ENST00000555269 NR3C2P08235 984 aa14.35□□□□□ -0.11
TRAPPC6B-205ENST00000555269 ADD1P35611 737 aaKnown RBP14.35□□□□□ -0.11
TRAPPC6B-205ENST00000555269 GHRHRQ02643 423 aa14.35□□□□□ -0.11
TRAPPC6B-205ENST00000555269 FUT2Q10981 343 aa14.35□□□□□ -0.11
TRAPPC6B-205ENST00000555269 PWP2Q15269 919 aaKnown RBP14.35□□□□□ -0.11
TRAPPC6B-205ENST00000555269 RTN1Q16799 776 aa14.35□□□□□ -0.11
TRAPPC6B-205ENST00000555269 TRIM60Q495X7 471 aa14.35□□□□□ -0.11
TRAPPC6B-205ENST00000555269 DUSP28Q4G0W2 176 aa14.35□□□□□ -0.11
TRAPPC6B-205ENST00000555269 USP17L6PQ6QN14 398 aa14.35□□□□□ -0.11
TRAPPC6B-205ENST00000555269 TLK2Q86UE8 772 aa14.35□□□□□ -0.11
TRAPPC6B-205ENST00000555269 VTI1AQ96AJ9 217 aa14.35□□□□□ -0.11
TRAPPC6B-205ENST00000555269 IWS1Q96ST2 819 aa14.35□□□□□ -0.11
TRAPPC6B-205ENST00000555269 AP5M1Q9H0R1 490 aa14.35□□□□□ -0.11
TRAPPC6B-205ENST00000555269 SPC25Q9HBM1 224 aa14.35□□□□□ -0.11
TRAPPC6B-205ENST00000555269 ZSWIM6Q9HCJ5 1215 aa14.35□□□□□ -0.11
TRAPPC6B-205ENST00000555269 SEC63Q9UGP8 760 aaKnown RBP14.35□□□□□ -0.11
TRAPPC6B-205ENST00000555269 V9GY48 417 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC6B-205ENST00000555269 GOLGA8AA7E2F4 631 aa14.34□□□□□ -0.11
TRAPPC6B-205ENST00000555269 GOLGA8BA8MQT2 603 aa14.34□□□□□ -0.11
TRAPPC6B-205ENST00000555269 B4DLN1 442 aa14.34□□□□□ -0.11
TRAPPC6B-205ENST00000555269 EPB41L2O43491 1005 aaKnown RBP14.34□□□□□ -0.11
TRAPPC6B-205ENST00000555269 TXNP10599 105 aaKnown RBP14.34□□□□□ -0.11
TRAPPC6B-205ENST00000555269 MYCLP12524 364 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC6B-205ENST00000555269 CST5P28325 142 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC6B-205ENST00000555269 MRPL12P52815 198 aaKnown RBP14.34□□□□□ -0.11
TRAPPC6B-205ENST00000555269 NKX3-2P78367 333 aa14.34□□□□□ -0.11
TRAPPC6B-205ENST00000555269 TLE2Q04725 743 aa14.34□□□□□ -0.11
TRAPPC6B-205ENST00000555269 TRAF1Q13077 416 aa14.34□□□□□ -0.11
TRAPPC6B-205ENST00000555269 STXBP2Q15833 593 aa14.34□□□□□ -0.11
TRAPPC6B-205ENST00000555269 FSCN1Q16658 493 aaKnown RBP14.34□□□□□ -0.11
TRAPPC6B-205ENST00000555269 LY6KQ17RY6 165 aa14.34□□□□□ -0.11
TRAPPC6B-205ENST00000555269 RUFY3Q7L099 469 aa14.34□□□□□ -0.11
TRAPPC6B-205ENST00000555269 GPKOWQ92917 476 aaPredicted RBP eCLIP14.34□□□□□ -0.11
TRAPPC6B-205ENST00000555269 MPHOSPH6Q99547 160 aaKnown RBP14.34□□□□□ -0.11
TRAPPC6B-205ENST00000555269 MAP3K20Q9NYL2 800 aaKnown RBP14.34□□□□□ -0.11
TRAPPC6B-205ENST00000555269 LCTP09848 1927 aa14.34□□□□□ -0.11
TRAPPC6B-205ENST00000555269 MOXD2PA6NHM9 499 aa14.33□□□□□ -0.12
TRAPPC6B-205ENST00000555269 MEIS2O14770 477 aa14.33□□□□□ -0.12
TRAPPC6B-205ENST00000555269 PPFIA3O75145 1194 aa14.33□□□□□ -0.12
TRAPPC6B-205ENST00000555269 TOB2Q14106 344 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC6B-205ENST00000555269 CCDC62Q6P9F0 684 aa14.33□□□□□ -0.12
TRAPPC6B-205ENST00000555269 CXCL17Q6UXB2 119 aa14.33□□□□□ -0.12
TRAPPC6B-205ENST00000555269 SH3RF1Q7Z6J0 888 aa14.33□□□□□ -0.12
TRAPPC6B-205ENST00000555269 VSIG10LQ86VR7 867 aa14.33□□□□□ -0.12
TRAPPC6B-205ENST00000555269 SAMD3Q8N6K7 520 aa14.33□□□□□ -0.12
TRAPPC6B-205ENST00000555269 PCSK9Q8NBP7 692 aaKnown RBP14.33□□□□□ -0.12
TRAPPC6B-205ENST00000555269 IL31RAQ8NI17 732 aa14.33□□□□□ -0.12
TRAPPC6B-205ENST00000555269 SCFD2Q8WU76 684 aa14.33□□□□□ -0.12
TRAPPC6B-205ENST00000555269 UPF3BQ9BZI7 483 aaKnown RBP14.33□□□□□ -0.12
TRAPPC6B-205ENST00000555269 STARD7Q9NQZ5 370 aa14.33□□□□□ -0.12
TRAPPC6B-205ENST00000555269 RBM28Q9NW13 759 aaKnown RBP14.33□□□□□ -0.12
TRAPPC6B-205ENST00000555269 RBM27Q9P2N5 1060 aaKnown RBP14.33□□□□□ -0.12
TRAPPC6B-205ENST00000555269 Q9Y3F1 56 aa14.33□□□□□ -0.12
TRAPPC6B-205ENST00000555269 EIF3JO75822 258 aaKnown RBP14.32□□□□□ -0.12
TRAPPC6B-205ENST00000555269 RGS20O76081 388 aa14.32□□□□□ -0.12
TRAPPC6B-205ENST00000555269 METAP2P50579 478 aaKnown RBP eCLIP14.32□□□□□ -0.12
TRAPPC6B-205ENST00000555269 SNX17Q15036 470 aa14.32□□□□□ -0.12
TRAPPC6B-205ENST00000555269 PGM5Q15124 567 aa14.32□□□□□ -0.12
TRAPPC6B-205ENST00000555269 HABP4Q5JVS0 413 aaKnown RBP14.32□□□□□ -0.12
TRAPPC6B-205ENST00000555269 HEATR3Q7Z4Q2 680 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms