RNA–Protein interactions for RNA: ENST00000554455.5

HNRNPC-211, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-211ENST00000554455 STAG3Q9UJ98 1225 aa9.43□□□□□ -0.9
HNRNPC-211ENST00000554455 COMMD3-BMI1R4GMX3 469 aa9.43□□□□□ -0.9
HNRNPC-211ENST00000554455 SPDYE5A6NIY4 337 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 TSPAN1O60635 241 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 WFS1O76024 890 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 ZNF202O95125 648 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 FAM107AO95990 144 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 SP100P23497 879 aaPredicted RBP9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 SCTRP47872 440 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 ZNF131P52739 623 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 IFI16Q16666 785 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 ZNF362Q5T0B9 420 aaPredicted RBP9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 CEP85Q6P2H3 762 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 KLC3Q6P597 504 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 LINS1Q8NG48 757 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 PTPRN2Q92932 1015 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 SNF8Q96H20 258 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 NAA15Q9BXJ9 866 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 SEMA4AQ9H3S1 761 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 OSBPL3Q9H4L5 887 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 PLSCR2Q9NRY7 297 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 STK39Q9UEW8 545 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 CCPG1Q9ULG6 757 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 FAM32AQ9Y421 112 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 SAMM50Q9Y512 469 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 CCDC61Q9Y6R9 512 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 NPHP4O75161 1426 aaPredicted RBP9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 SPTLC2O15270 562 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 TEX28O15482 410 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 HNRNPCP07910 306 aaKnown RBP eCLIP9.42□□□□□ -0.93e-7■■□□□ 12.3
HNRNPC-211ENST00000554455 ZSCAN22P10073 491 aaPredicted RBP9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 FOSBP53539 338 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 VSNL1P62760 191 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 LSAMPQ13449 338 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 PDCD4Q53EL6 469 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 ANKRD20A2Q5SQ80 823 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 ANKRD20A1Q5TYW2 823 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 ANKRD20A3Q5VUR7 823 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 GRAMD4Q6IC98 578 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 OR52E8Q6IFG1 317 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 ANO7Q6IWH7 933 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 LILRB1Q8NHL6 650 aaPredicted RBP9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 ZC3H15Q8WU90 426 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 MAML1Q92585 1016 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 NUDT16Q96DE0 195 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 CLMNQ96JQ2 1002 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 TUBGCP5Q96RT8 1024 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 CLSTN2Q9H4D0 955 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 RHBDL2Q9NX52 303 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 LRRC42Q9Y546 428 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 NR2E3Q9Y5X4 410 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 N4BP2Q86UW6 1770 aaPredicted RBP9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 CRB1P82279 1406 aa9.42□□□□□ -0.9
HNRNPC-211ENST00000554455 USP31Q70CQ4 1352 aa9.41□□□□□ -0.9
HNRNPC-211ENST00000554455 LINC00854A0A1B0GVQ3 168 aa9.41□□□□□ -0.9
HNRNPC-211ENST00000554455 VWA3AA6NCI4 1184 aa9.41□□□□□ -0.9
HNRNPC-211ENST00000554455 SUPT3HO75486 399 aa9.41□□□□□ -0.9
HNRNPC-211ENST00000554455 CYP1A2P05177 515 aa9.41□□□□□ -0.9
HNRNPC-211ENST00000554455 EIF2S1P05198 315 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-211ENST00000554455 PTPN2P17706 415 aa9.41□□□□□ -0.9
HNRNPC-211ENST00000554455 IBSPP21815 317 aaPredicted RBP9.41□□□□□ -0.9
HNRNPC-211ENST00000554455 RAB15P59190 212 aa9.41□□□□□ -0.9
HNRNPC-211ENST00000554455 SHROOM1Q2M3G4 852 aaPredicted RBP9.41□□□□□ -0.9
HNRNPC-211ENST00000554455 FAM209AQ5JX71 171 aa9.41□□□□□ -0.9
HNRNPC-211ENST00000554455 KDM7AQ6ZMT4 941 aa9.41□□□□□ -0.9
HNRNPC-211ENST00000554455 ARHGAP27Q6ZUM4 889 aa9.41□□□□□ -0.9
HNRNPC-211ENST00000554455 C3orf67Q6ZVT6 689 aa9.41□□□□□ -0.9
HNRNPC-211ENST00000554455 TRIM50Q86XT4 487 aa9.41□□□□□ -0.9
HNRNPC-211ENST00000554455 SLC16A10Q8TF71 515 aa9.41□□□□□ -0.9
HNRNPC-211ENST00000554455 GFM2Q969S9 779 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-211ENST00000554455 C8orf48Q96LL4 319 aa9.41□□□□□ -0.9
HNRNPC-211ENST00000554455 DRC3Q9H069 523 aa9.41□□□□□ -0.9
HNRNPC-211ENST00000554455 CARD9Q9H257 536 aa9.41□□□□□ -0.9
HNRNPC-211ENST00000554455 KCNMB3Q9NPA1 279 aa9.41□□□□□ -0.9
HNRNPC-211ENST00000554455 TYW1Q9NV66 732 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-211ENST00000554455 CNPY2Q9Y2B0 182 aa9.41□□□□□ -0.9
HNRNPC-211ENST00000554455 LRRC37A3O60309 1634 aa9.41□□□□□ -0.9
HNRNPC-211ENST00000554455 CHD2O14647 1828 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-211ENST00000554455 C5orf60A6NFR6 353 aa9.4□□□□□ -0.9
HNRNPC-211ENST00000554455 TNFRSF10AO00220 468 aa9.4□□□□□ -0.9
HNRNPC-211ENST00000554455 MAP3K13O43283 966 aa9.4□□□□□ -0.9
HNRNPC-211ENST00000554455 B4GALT4O60513 344 aa9.4□□□□□ -0.9
HNRNPC-211ENST00000554455 SDSP20132 328 aa9.4□□□□□ -0.9
HNRNPC-211ENST00000554455 NFKBIAP25963 317 aa9.4□□□□□ -0.9
HNRNPC-211ENST00000554455 ETV3P41162 512 aa9.4□□□□□ -0.9
HNRNPC-211ENST00000554455 KIF11P52732 1056 aa9.4□□□□□ -0.9
HNRNPC-211ENST00000554455 NDUFA5Q16718 116 aa9.4□□□□□ -0.9
HNRNPC-211ENST00000554455 SPECC1Q5M775 1068 aa9.4□□□□□ -0.9
HNRNPC-211ENST00000554455 RNF187Q5TA31 235 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-211ENST00000554455 DEPDC1Q5TB30 811 aa9.4□□□□□ -0.9
HNRNPC-211ENST00000554455 IL23RQ5VWK5 629 aa9.4□□□□□ -0.9
HNRNPC-211ENST00000554455 IRGCQ6NXR0 463 aa9.4□□□□□ -0.9
HNRNPC-211ENST00000554455 LVRNQ6Q4G3 990 aa9.4□□□□□ -0.9
HNRNPC-211ENST00000554455 FAM186BQ8IYM0 893 aa9.4□□□□□ -0.9
HNRNPC-211ENST00000554455 NDUFAF2Q8N183 169 aa9.4□□□□□ -0.9
HNRNPC-211ENST00000554455 LILRB2Q8N423 598 aa9.4□□□□□ -0.9
HNRNPC-211ENST00000554455 CASP10Q92851 521 aa9.4□□□□□ -0.9
HNRNPC-211ENST00000554455 CEP63Q96MT8 703 aa9.4□□□□□ -0.9
HNRNPC-211ENST00000554455 NEUROD6Q96NK8 337 aa9.4□□□□□ -0.9
HNRNPC-211ENST00000554455 QTRT2Q9H974 415 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms