RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 ADARB2Q9NS39 739 aaKnown RBP11.14□□□□□ -0.63
TMEM116-216ENST00000552800 PPP1R1BQ9UD71 204 aaPredicted RBP11.14□□□□□ -0.63
TMEM116-216ENST00000552800 POLR2AP24928 1970 aaKnown RBP11.14□□□□□ -0.63
TMEM116-216ENST00000552800 TMEM232C9JQI7 657 aa11.13□□□□□ -0.63
TMEM116-216ENST00000552800 OPLAHO14841 1288 aa11.13□□□□□ -0.63
TMEM116-216ENST00000552800 POLR2DO15514 142 aaKnown RBP11.13□□□□□ -0.63
TMEM116-216ENST00000552800 SLC16A2P36021 539 aa11.13□□□□□ -0.63
TMEM116-216ENST00000552800 INF2Q27J81 1249 aa11.13□□□□□ -0.63
TMEM116-216ENST00000552800 CCDC96Q2M329 555 aa11.13□□□□□ -0.63
TMEM116-216ENST00000552800 SUPT20HL1Q3ZLR7 823 aa11.13□□□□□ -0.63
TMEM116-216ENST00000552800 Q4G0T1 1027 aa11.13□□□□□ -0.63
TMEM116-216ENST00000552800 ANO6Q4KMQ2 910 aa11.13□□□□□ -0.63
TMEM116-216ENST00000552800 SH3D19Q5HYK7 790 aa11.13□□□□□ -0.63
TMEM116-216ENST00000552800 HYIQ5T013 277 aa11.13□□□□□ -0.63
TMEM116-216ENST00000552800 C6orf132Q5T0Z8 1188 aa11.13□□□□□ -0.63
TMEM116-216ENST00000552800 USP49Q70CQ1 688 aa11.13□□□□□ -0.63
TMEM116-216ENST00000552800 HOMER1Q86YM7 354 aa11.13□□□□□ -0.63
TMEM116-216ENST00000552800 CKAP2LQ8IYA6 745 aa11.13□□□□□ -0.63
TMEM116-216ENST00000552800 PRPF38AQ8NAV1 312 aaKnown RBP11.13□□□□□ -0.63
TMEM116-216ENST00000552800 CNNM3Q8NE01 707 aa11.13□□□□□ -0.63
TMEM116-216ENST00000552800 GTPBP4Q9BZE4 634 aaKnown RBP11.13□□□□□ -0.63
TMEM116-216ENST00000552800 TMEM60Q9H2L4 133 aa11.13□□□□□ -0.63
TMEM116-216ENST00000552800 CBX8Q9HC52 389 aa11.13□□□□□ -0.63
TMEM116-216ENST00000552800 KBTBD4Q9NVX7 518 aa11.13□□□□□ -0.63
TMEM116-216ENST00000552800 PCDHA5Q9Y5H7 936 aa11.13□□□□□ -0.63
TMEM116-216ENST00000552800 PHIPQ8WWQ0 1821 aa11.13□□□□□ -0.63
TMEM116-216ENST00000552800 MYH7BA7E2Y1 1941 aa11.13□□□□□ -0.63
TMEM116-216ENST00000552800 ATP2A1O14983 1001 aa11.12□□□□□ -0.63
TMEM116-216ENST00000552800 OR52Z1P0C646 297 aa11.12□□□□□ -0.63
TMEM116-216ENST00000552800 MCM7P33993 719 aa11.12□□□□□ -0.63
TMEM116-216ENST00000552800 SREBF1P36956 1147 aa11.12□□□□□ -0.63
TMEM116-216ENST00000552800 ATP2B2Q01814 1243 aa11.12□□□□□ -0.63
TMEM116-216ENST00000552800 DPYDQ12882 1025 aa11.12□□□□□ -0.63
TMEM116-216ENST00000552800 MORC3Q14149 939 aa11.12□□□□□ -0.63
TMEM116-216ENST00000552800 NBPF12Q5TAG4 269 aaPredicted RBP11.12□□□□□ -0.63
TMEM116-216ENST00000552800 PDXDC2PQ6P474 469 aa11.12□□□□□ -0.63
TMEM116-216ENST00000552800 USP50Q70EL3 339 aaPredicted RBP11.12□□□□□ -0.63
TMEM116-216ENST00000552800 MIGA2Q7L4E1 593 aa11.12□□□□□ -0.63
TMEM116-216ENST00000552800 GPIHBP1Q8IV16 184 aa11.12□□□□□ -0.63
TMEM116-216ENST00000552800 SCYL3Q8IZE3 742 aa11.12□□□□□ -0.63
TMEM116-216ENST00000552800 MLKLQ8NB16 471 aa11.12□□□□□ -0.63
TMEM116-216ENST00000552800 RASGRP4Q8TDF6 673 aa11.12□□□□□ -0.63
TMEM116-216ENST00000552800 SYMPKQ92797 1274 aaKnown RBP11.12□□□□□ -0.63
TMEM116-216ENST00000552800 EPSTI1Q96J88 318 aa11.12□□□□□ -0.63
TMEM116-216ENST00000552800 KCNK17Q96T54 332 aa11.12□□□□□ -0.63
TMEM116-216ENST00000552800 KCNMB3Q9NPA1 279 aa11.12□□□□□ -0.63
TMEM116-216ENST00000552800 BIN2Q9UBW5 565 aaPredicted RBP11.12□□□□□ -0.63
TMEM116-216ENST00000552800 RABGAP1Q9Y3P9 1069 aa11.12□□□□□ -0.63
TMEM116-216ENST00000552800 DOCK1Q14185 1865 aa11.12□□□□□ -0.63
TMEM116-216ENST00000552800 GOLGB1Q14789 3259 aaKnown RBP11.11□□□□□ -0.63
TMEM116-216ENST00000552800 MYPNQ86TC9 1320 aa11.11□□□□□ -0.63
TMEM116-216ENST00000552800 RLFQ13129 1914 aa11.11□□□□□ -0.63
TMEM116-216ENST00000552800 PAPPA2Q9BXP8 1791 aa11.11□□□□□ -0.63
TMEM116-216ENST00000552800 A0A087X0B3 334 aa11.11□□□□□ -0.63
TMEM116-216ENST00000552800 NEMFO60524 1076 aa11.11□□□□□ -0.63
TMEM116-216ENST00000552800 ERCC5P28715 1186 aaPredicted RBP11.11□□□□□ -0.63
TMEM116-216ENST00000552800 EPS15P42566 896 aa11.11□□□□□ -0.63
TMEM116-216ENST00000552800 OAZ1P54368 228 aa11.11□□□□□ -0.63
TMEM116-216ENST00000552800 BACE1P56817 501 aa11.11□□□□□ -0.63
TMEM116-216ENST00000552800 NCAPHQ15003 741 aa11.11□□□□□ -0.63
TMEM116-216ENST00000552800 POSTNQ15063 836 aa11.11□□□□□ -0.63
TMEM116-216ENST00000552800 TBC1D10BQ4KMP7 808 aaPredicted RBP11.11□□□□□ -0.63
TMEM116-216ENST00000552800 COBLL1Q53SF7 1204 aa11.11□□□□□ -0.63
TMEM116-216ENST00000552800 NAALADL2Q58DX5 795 aa11.11□□□□□ -0.63
TMEM116-216ENST00000552800 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.11□□□□□ -0.63
TMEM116-216ENST00000552800 DHX40Q8IX18 779 aaKnown RBP11.11□□□□□ -0.63
TMEM116-216ENST00000552800 PAGE5Q96GU1 130 aa11.11□□□□□ -0.63
TMEM116-216ENST00000552800 MTRQ99707 1265 aa11.11□□□□□ -0.63
TMEM116-216ENST00000552800 AS3MTQ9HBK9 375 aa11.11□□□□□ -0.63
TMEM116-216ENST00000552800 SERTAD1Q9UHV2 236 aa11.11□□□□□ -0.63
TMEM116-216ENST00000552800 MRPL11Q9Y3B7 192 aaKnown RBP11.11□□□□□ -0.63
TMEM116-216ENST00000552800 GJA3Q9Y6H8 435 aa11.11□□□□□ -0.63
TMEM116-216ENST00000552800 PARP14Q460N5 1801 aa11.11□□□□□ -0.63
TMEM116-216ENST00000552800 SMCHD1A6NHR9 2005 aa11.11□□□□□ -0.63
TMEM116-216ENST00000552800 ZNF536O15090 1300 aa11.1□□□□□ -0.63
TMEM116-216ENST00000552800 ABCB11O95342 1321 aa11.1□□□□□ -0.63
TMEM116-216ENST00000552800 SCN4AP35499 1836 aa11.1□□□□□ -0.63
TMEM116-216ENST00000552800 VWA3AA6NCI4 1184 aa11.1□□□□□ -0.63
TMEM116-216ENST00000552800 SMTNL1A8MU46 457 aa11.1□□□□□ -0.63
TMEM116-216ENST00000552800 CCNT1O60563 726 aaKnown RBP11.1□□□□□ -0.63
TMEM116-216ENST00000552800 USP2O75604 605 aaPredicted RBP11.1□□□□□ -0.63
TMEM116-216ENST00000552800 SMC2O95347 1197 aa11.1□□□□□ -0.63
TMEM116-216ENST00000552800 ICAM1P05362 532 aa11.1□□□□□ -0.63
TMEM116-216ENST00000552800 PTPRAP18433 802 aa11.1□□□□□ -0.63
TMEM116-216ENST00000552800 BMP6P22004 513 aa11.1□□□□□ -0.63
TMEM116-216ENST00000552800 CDC25BP30305 580 aa11.1□□□□□ -0.63
TMEM116-216ENST00000552800 KCNB1Q14721 858 aa11.1□□□□□ -0.63
TMEM116-216ENST00000552800 ANGEL2Q5VTE6 544 aaKnown RBP11.1□□□□□ -0.63
TMEM116-216ENST00000552800 FOXR2Q6PJQ5 311 aa11.1□□□□□ -0.63
TMEM116-216ENST00000552800 POTEEQ6S8J3 1075 aa11.1□□□□□ -0.63
TMEM116-216ENST00000552800 CEP57L1Q8IYX8 460 aa11.1□□□□□ -0.63
TMEM116-216ENST00000552800 ZNF280CQ8ND82 737 aa11.1□□□□□ -0.63
TMEM116-216ENST00000552800 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.1□□□□□ -0.63
TMEM116-216ENST00000552800 RBM46Q8TBY0 533 aaKnown RBP11.1□□□□□ -0.63
TMEM116-216ENST00000552800 TRPM4Q8TD43 1214 aa11.1□□□□□ -0.63
TMEM116-216ENST00000552800 PIBF1Q8WXW3 757 aa11.1□□□□□ -0.63
TMEM116-216ENST00000552800 HAS1Q92839 578 aa11.1□□□□□ -0.63
TMEM116-216ENST00000552800 FAM20AQ96MK3 541 aa11.1□□□□□ -0.63
TMEM116-216ENST00000552800 P2RX7Q99572 595 aaKnown RBP11.1□□□□□ -0.63
TMEM116-216ENST00000552800 MMTAG2Q9BU76 263 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms