RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 DHX16O60231 1041 aaKnown RBP5.13□□□□□ -1.59
USP44-208ENST00000552440 GRIN3BO60391 1043 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 DDAH1O94760 285 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 SLITRK5O94991 958 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 CST3P01034 146 aaPredicted RBP5.13□□□□□ -1.59
USP44-208ENST00000552440 TMEM253P0C7T8 217 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 POLD1P28340 1107 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 MTMR1Q13613 665 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 LONRF1Q17RB8 773 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 MRM1Q6IN84 353 aaKnown RBP5.13□□□□□ -1.59
USP44-208ENST00000552440 LETMD1Q6P1Q0 360 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 C6orf15Q6UXA7 325 aaPredicted RBP5.13□□□□□ -1.59
USP44-208ENST00000552440 MPRIPQ6WCQ1 1025 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 SYDE1Q6ZW31 735 aaPredicted RBP5.13□□□□□ -1.59
USP44-208ENST00000552440 TTC6Q86TZ1 520 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 FAM178BQ8IXR5 827 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 ST13P5Q8NFI4 369 aaPredicted RBP5.13□□□□□ -1.59
USP44-208ENST00000552440 ZNF669Q96BR6 464 aaPredicted RBP5.13□□□□□ -1.59
USP44-208ENST00000552440 HOOK2Q96ED9 719 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 ALPK1Q96QP1 1244 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 MIPEPQ99797 713 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 SELENOOQ9BVL4 669 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 ANTXR1Q9H6X2 564 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 AASDHPPTQ9NRN7 309 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 CLIC5Q9NZA1 410 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.13□□□□□ -1.59
USP44-208ENST00000552440 ZMYM5Q9UJ78 669 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 FBXO2Q9UK22 296 aaPredicted RBP5.13□□□□□ -1.59
USP44-208ENST00000552440 RABGAP1Q9Y3P9 1069 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 NUB1Q9Y5A7 615 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 CAPN6Q9Y6Q1 641 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 RASSF10A6NK89 507 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 MEIS3P2A8K0S8 358 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 SARSP49591 514 aaKnown RBP5.13□□□□□ -1.59
USP44-208ENST00000552440 SLBPQ14493 270 aaKnown RBP eCLIP5.13□□□□□ -1.59
USP44-208ENST00000552440 CCDC96Q2M329 555 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 CDKAL1Q5VV42 579 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 PASD1Q8IV76 773 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 SUGP1Q8IWZ8 645 aaKnown RBP5.13□□□□□ -1.59
USP44-208ENST00000552440 ZSWIM2Q8NEG5 633 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 PPHLN1Q8NEY8 458 aaKnown RBP5.13□□□□□ -1.59
USP44-208ENST00000552440 RIN3Q8TB24 985 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 SYTL4Q96C24 671 aaPredicted RBP5.13□□□□□ -1.59
USP44-208ENST00000552440 LIN37Q96GY3 246 aaPredicted RBP5.13□□□□□ -1.59
USP44-208ENST00000552440 TM9SF2Q99805 663 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 HERPUD2Q9BSE4 406 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 ATP13A1Q9HD20 1204 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 OBP2AQ9NY56 170 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 RAPGEFL1Q9UHV5 662 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 PUF60Q9UHX1 559 aaKnown RBP5.13□□□□□ -1.59
USP44-208ENST00000552440 MAPRE3Q9UPY8 281 aa5.13□□□□□ -1.59
USP44-208ENST00000552440 PRR36Q9H6K5 1346 aa5.12□□□□□ -1.59
USP44-208ENST00000552440 UPK3BL1B0FP48 263 aa5.12□□□□□ -1.59
USP44-208ENST00000552440 UPK3BL2E5RIL1 263 aa5.12□□□□□ -1.59
USP44-208ENST00000552440 RRM1P23921 792 aa5.12□□□□□ -1.59
USP44-208ENST00000552440 GUCY2CP25092 1073 aa5.12□□□□□ -1.59
USP44-208ENST00000552440 HALP42357 657 aa5.12□□□□□ -1.59
USP44-208ENST00000552440 RBM10P98175 930 aaKnown RBP5.12□□□□□ -1.59
USP44-208ENST00000552440 PDE4BQ07343 736 aa5.12□□□□□ -1.59
USP44-208ENST00000552440 SSRP1Q08945 709 aaKnown RBP5.12□□□□□ -1.59
USP44-208ENST00000552440 HYIQ5T013 277 aa5.12□□□□□ -1.59
USP44-208ENST00000552440 LRFN4Q6PJG9 635 aa5.12□□□□□ -1.59
USP44-208ENST00000552440 NECAB2Q7Z6G3 386 aa5.12□□□□□ -1.59
USP44-208ENST00000552440 PJA1Q8NG27 643 aa5.12□□□□□ -1.59
USP44-208ENST00000552440 SKA1Q96BD8 255 aa5.12□□□□□ -1.59
USP44-208ENST00000552440 CHMP4CQ96CF2 233 aa5.12□□□□□ -1.59
USP44-208ENST00000552440 MTMR8Q96EF0 704 aa5.12□□□□□ -1.59
USP44-208ENST00000552440 TRMT2BQ96GJ1 504 aaKnown RBP5.12□□□□□ -1.59
USP44-208ENST00000552440 PLPPR2Q96GM1 343 aa5.12□□□□□ -1.59
USP44-208ENST00000552440 GPR101Q96P66 508 aaPredicted RBP5.12□□□□□ -1.59
USP44-208ENST00000552440 SARGQ9BW04 601 aa5.12□□□□□ -1.59
USP44-208ENST00000552440 LRRC27Q9C0I9 530 aa5.12□□□□□ -1.59
USP44-208ENST00000552440 TRIT1Q9H3H1 467 aaKnown RBP5.12□□□□□ -1.59
USP44-208ENST00000552440 ZNF180Q9UJW8 692 aa5.12□□□□□ -1.59
USP44-208ENST00000552440 HDAC9Q9UKV0 1011 aa5.12□□□□□ -1.59
USP44-208ENST00000552440 KLRG2A4D1S0 409 aaPredicted RBP5.11□□□□□ -1.59
USP44-208ENST00000552440 GSG1L2A8MUP6 293 aa5.11□□□□□ -1.59
USP44-208ENST00000552440 VSTM5A8MXK1 200 aa5.11□□□□□ -1.59
USP44-208ENST00000552440 PIP5K1CO60331 668 aa5.11□□□□□ -1.59
USP44-208ENST00000552440 RFPL1O75677 317 aa5.11□□□□□ -1.59
USP44-208ENST00000552440 EYA4O95677 639 aa5.11□□□□□ -1.59
USP44-208ENST00000552440 CDK8P49336 464 aa5.11□□□□□ -1.59
USP44-208ENST00000552440 PABPC4Q13310 644 aaKnown RBP eCLIP5.11□□□□□ -1.59
USP44-208ENST00000552440 LRRFIP1Q32MZ4 808 aaKnown RBP5.11□□□□□ -1.59
USP44-208ENST00000552440 ALDH1L2Q3SY69 923 aa5.11□□□□□ -1.59
USP44-208ENST00000552440 SLC6A19Q695T7 634 aa5.11□□□□□ -1.59
USP44-208ENST00000552440 KRT77Q7Z794 578 aa5.11□□□□□ -1.59
USP44-208ENST00000552440 ZBTB46Q86UZ6 589 aa5.11□□□□□ -1.59
USP44-208ENST00000552440 LRRC56Q8IYG6 542 aaPredicted RBP5.11□□□□□ -1.59
USP44-208ENST00000552440 ABHD4Q8TB40 342 aa5.11□□□□□ -1.59
USP44-208ENST00000552440 SCLT1Q96NL6 688 aa5.11□□□□□ -1.59
USP44-208ENST00000552440 SLC26A8Q96RN1 970 aa5.11□□□□□ -1.59
USP44-208ENST00000552440 STRBPQ96SI9 672 aaKnown RBP5.11□□□□□ -1.59
USP44-208ENST00000552440 C9orf78Q9NZ63 289 aaPredicted RBP5.11□□□□□ -1.59
USP44-208ENST00000552440 EVLQ9UI08 416 aaPredicted RBP5.11□□□□□ -1.59
USP44-208ENST00000552440 ST14Q9Y5Y6 855 aa5.11□□□□□ -1.59
USP44-208ENST00000552440 PRSS47A8MTI9 375 aa5.11□□□□□ -1.59
USP44-208ENST00000552440 H3BS24 57 aa5.11□□□□□ -1.59
USP44-208ENST00000552440 GFRA2O00451 464 aa5.11□□□□□ -1.59
USP44-208ENST00000552440 HTR3BO95264 441 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms