RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 CTNNA3Q9UI47 895 aa12.34□□□□□ -0.43
SLC48A1-209ENST00000552003 ABHD14A-ACY1A0A1B0GW23 586 aa12.33□□□□□ -0.44
SLC48A1-209ENST00000552003 GALR2O43603 387 aaPredicted RBP12.33□□□□□ -0.44
SLC48A1-209ENST00000552003 LRRFIP1Q32MZ4 808 aaKnown RBP12.33□□□□□ -0.44
SLC48A1-209ENST00000552003 SLFNL1Q499Z3 407 aa12.33□□□□□ -0.44
SLC48A1-209ENST00000552003 GDF6Q6KF10 455 aaPredicted RBP12.33□□□□□ -0.44
SLC48A1-209ENST00000552003 WNT8BQ93098 351 aa12.33□□□□□ -0.44
SLC48A1-209ENST00000552003 KIFC2Q96AC6 838 aa12.33□□□□□ -0.44
SLC48A1-209ENST00000552003 MSLNLQ96KJ4 702 aa12.33□□□□□ -0.44
SLC48A1-209ENST00000552003 IRF2BPLQ9H1B7 796 aa12.33□□□□□ -0.44
SLC48A1-209ENST00000552003 KANSL2Q9H9L4 492 aa12.33□□□□□ -0.44
SLC48A1-209ENST00000552003 GOPCQ9HD26 462 aa12.33□□□□□ -0.44
SLC48A1-209ENST00000552003 POLR3EQ9NVU0 708 aa12.33□□□□□ -0.44
SLC48A1-209ENST00000552003 INSL6Q9Y581 213 aa12.33□□□□□ -0.44
SLC48A1-209ENST00000552003 ASB14A6NK59 587 aa12.32□□□□□ -0.44
SLC48A1-209ENST00000552003 F5H6K3 240 aa12.32□□□□□ -0.44
SLC48A1-209ENST00000552003 ZBED4O75132 1171 aa12.32□□□□□ -0.44
SLC48A1-209ENST00000552003 LINC00271P0C7V0 271 aa12.32□□□□□ -0.44
SLC48A1-209ENST00000552003 SELPP16109 830 aa12.32□□□□□ -0.44
SLC48A1-209ENST00000552003 KLRC3Q07444 240 aa12.32□□□□□ -0.44
SLC48A1-209ENST00000552003 G3BP1Q13283 466 aaKnown RBP eCLIP12.32□□□□□ -0.44
SLC48A1-209ENST00000552003 LRRC8DQ7L1W4 858 aa12.32□□□□□ -0.44
SLC48A1-209ENST00000552003 TMEM192Q8IY95 271 aa12.32□□□□□ -0.44
SLC48A1-209ENST00000552003 MORC4Q8TE76 937 aa12.32□□□□□ -0.44
SLC48A1-209ENST00000552003 AFAP1L1Q8TED9 768 aa12.32□□□□□ -0.44
SLC48A1-209ENST00000552003 COPS5Q92905 334 aa12.32□□□□□ -0.44
SLC48A1-209ENST00000552003 CCDC17Q96LX7 622 aa12.32□□□□□ -0.44
SLC48A1-209ENST00000552003 CRBNQ96SW2 442 aa12.32□□□□□ -0.44
SLC48A1-209ENST00000552003 FBXO40Q9UH90 709 aa12.32□□□□□ -0.44
SLC48A1-209ENST00000552003 OTOGLQ3ZCN5 2332 aa12.32□□□□□ -0.44
SLC48A1-209ENST00000552003 MYO10Q9HD67 2058 aa12.31□□□□□ -0.44
SLC48A1-209ENST00000552003 TCRBV5S4A2TA0A5A2 114 aa12.31□□□□□ -0.44
SLC48A1-209ENST00000552003 GRM6O15303 877 aa12.31□□□□□ -0.44
SLC48A1-209ENST00000552003 KDM4AO75164 1064 aa12.31□□□□□ -0.44
SLC48A1-209ENST00000552003 CKBP12277 381 aa12.31□□□□□ -0.44
SLC48A1-209ENST00000552003 RBL2Q08999 1139 aa12.31□□□□□ -0.44
SLC48A1-209ENST00000552003 PTGISQ16647 500 aa12.31□□□□□ -0.44
SLC48A1-209ENST00000552003 C12orf60Q5U649 245 aa12.31□□□□□ -0.44
SLC48A1-209ENST00000552003 C16orf86Q6ZW13 317 aa12.31□□□□□ -0.44
SLC48A1-209ENST00000552003 TMEM105Q8N8V8 129 aa12.31□□□□□ -0.44
SLC48A1-209ENST00000552003 EAF2Q96CJ1 260 aaPredicted RBP12.31□□□□□ -0.44
SLC48A1-209ENST00000552003 OSBPL7Q9BZF2 842 aa12.31□□□□□ -0.44
SLC48A1-209ENST00000552003 CRNKL1Q9BZJ0 848 aaKnown RBP12.31□□□□□ -0.44
SLC48A1-209ENST00000552003 CCDC8Q9H0W5 538 aaPredicted RBP12.31□□□□□ -0.44
SLC48A1-209ENST00000552003 CLEC1BQ9P126 229 aa12.31□□□□□ -0.44
SLC48A1-209ENST00000552003 CD207Q9UJ71 328 aa12.31□□□□□ -0.44
SLC48A1-209ENST00000552003 NOB1Q9ULX3 412 aaKnown RBP12.31□□□□□ -0.44
SLC48A1-209ENST00000552003 RALGAPA2Q2PPJ7 1873 aa12.3□□□□□ -0.44
SLC48A1-209ENST00000552003 RBM47A0AV96 593 aaKnown RBP12.3□□□□□ -0.44
SLC48A1-209ENST00000552003 USP17L12C9JPN9 530 aa12.3□□□□□ -0.44
SLC48A1-209ENST00000552003 USP17L21D6R901 530 aa12.3□□□□□ -0.44
SLC48A1-209ENST00000552003 EYA4O95677 639 aa12.3□□□□□ -0.44
SLC48A1-209ENST00000552003 PDE6AP16499 860 aa12.3□□□□□ -0.44
SLC48A1-209ENST00000552003 PTPN11Q06124 597 aaPredicted RBP12.3□□□□□ -0.44
SLC48A1-209ENST00000552003 ADAM15Q13444 863 aa12.3□□□□□ -0.44
SLC48A1-209ENST00000552003 CAMK1Q14012 370 aa12.3□□□□□ -0.44
SLC48A1-209ENST00000552003 TRIM71Q2Q1W2 868 aaKnown RBP12.3□□□□□ -0.44
SLC48A1-209ENST00000552003 MUM1L1Q5H9M0 696 aa12.3□□□□□ -0.44
SLC48A1-209ENST00000552003 FBXO11Q86XK2 927 aa12.3□□□□□ -0.44
SLC48A1-209ENST00000552003 CAGE1Q8TC20 777 aa12.3□□□□□ -0.44
SLC48A1-209ENST00000552003 WDR11Q9BZH6 1224 aa12.3□□□□□ -0.44
SLC48A1-209ENST00000552003 IGFLR1Q9H665 355 aa12.3□□□□□ -0.44
SLC48A1-209ENST00000552003 ACAD9Q9H845 621 aa12.3□□□□□ -0.44
SLC48A1-209ENST00000552003 ARMT1Q9H993 441 aa12.3□□□□□ -0.44
SLC48A1-209ENST00000552003 MRS2Q9HD23 443 aa12.3□□□□□ -0.44
SLC48A1-209ENST00000552003 VTA1Q9NP79 307 aa12.3□□□□□ -0.44
SLC48A1-209ENST00000552003 RNF146Q9NTX7 359 aa12.3□□□□□ -0.44
SLC48A1-209ENST00000552003 COG6Q9Y2V7 657 aa12.3□□□□□ -0.44
SLC48A1-209ENST00000552003 MYH4Q9Y623 1939 aa12.3□□□□□ -0.44
SLC48A1-209ENST00000552003 FASNP49327 2511 aaKnown RBP12.3□□□□□ -0.44
SLC48A1-209ENST00000552003 A6NJR5 290 aa12.29□□□□□ -0.44
SLC48A1-209ENST00000552003 CPT1AP50416 773 aa12.29□□□□□ -0.44
SLC48A1-209ENST00000552003 OAZ1P54368 228 aa12.29□□□□□ -0.44
SLC48A1-209ENST00000552003 RRP1P56182 461 aaKnown RBP12.29□□□□□ -0.44
SLC48A1-209ENST00000552003 CACNB1Q02641 598 aaPredicted RBP12.29□□□□□ -0.44
SLC48A1-209ENST00000552003 IKBKEQ14164 716 aa12.29□□□□□ -0.44
SLC48A1-209ENST00000552003 DGLUCYQ7Z3D6 616 aa12.29□□□□□ -0.44
SLC48A1-209ENST00000552003 MYOCDQ8IZQ8 938 aa12.29□□□□□ -0.44
SLC48A1-209ENST00000552003 OR6J1Q8NGC5 347 aa12.29□□□□□ -0.44
SLC48A1-209ENST00000552003 KAT2BQ92831 832 aa12.29□□□□□ -0.44
SLC48A1-209ENST00000552003 NKD2Q969F2 451 aaPredicted RBP12.29□□□□□ -0.44
SLC48A1-209ENST00000552003 CYP39A1Q9NYL5 469 aa12.29□□□□□ -0.44
SLC48A1-209ENST00000552003 RALYQ9UKM9 306 aaKnown RBP12.29□□□□□ -0.44
SLC48A1-209ENST00000552003 E9PSI1 815 aa12.28□□□□□ -0.44
SLC48A1-209ENST00000552003 NCK2O43639 380 aa12.28□□□□□ -0.44
SLC48A1-209ENST00000552003 CHGBP05060 677 aa12.28□□□□□ -0.44
SLC48A1-209ENST00000552003 CHMP4BP1P59074 171 aa12.28□□□□□ -0.44
SLC48A1-209ENST00000552003 HIC1Q14526 733 aa12.28□□□□□ -0.44
SLC48A1-209ENST00000552003 ALDH1L2Q3SY69 923 aa12.28□□□□□ -0.44
SLC48A1-209ENST00000552003 SMRP1Q8NCR6 262 aa12.28□□□□□ -0.44
SLC48A1-209ENST00000552003 DBF4BQ8NFT6 615 aa12.28□□□□□ -0.44
SLC48A1-209ENST00000552003 RIPOR3Q96MK2 946 aa12.28□□□□□ -0.44
SLC48A1-209ENST00000552003 SAMD11Q96NU1 681 aa12.28□□□□□ -0.44
SLC48A1-209ENST00000552003 INCENPQ9NQS7 918 aa12.28□□□□□ -0.44
SLC48A1-209ENST00000552003 SMC4Q9NTJ3 1288 aa12.28□□□□□ -0.44
SLC48A1-209ENST00000552003 HDAC5Q9UQL6 1122 aa12.28□□□□□ -0.44
SLC48A1-209ENST00000552003 NOD1Q9Y239 953 aa12.28□□□□□ -0.44
SLC48A1-209ENST00000552003 ZNF532Q9HCE3 1301 aa12.28□□□□□ -0.44
SLC48A1-209ENST00000552003 GPR179Q6PRD1 2367 aa12.28□□□□□ -0.44
SLC48A1-209ENST00000552003 CSPG5O95196 566 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms