RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 KCNB2Q92953 911 aa19.36■□□□□ 0.69
BRF1-219ENST00000551787 LZTS2Q9BRK4 669 aa19.36■□□□□ 0.69
BRF1-219ENST00000551787 SPZ1Q9BXG8 430 aa19.36■□□□□ 0.69
BRF1-219ENST00000551787 PRDM5Q9NQX1 630 aaPredicted RBP19.36■□□□□ 0.69
BRF1-219ENST00000551787 NAP1L2Q9ULW6 460 aaPredicted RBP19.36■□□□□ 0.69
BRF1-219ENST00000551787 MOXD2PA6NHM9 499 aa19.35■□□□□ 0.69
BRF1-219ENST00000551787 B4DLN1 442 aa19.35■□□□□ 0.69
BRF1-219ENST00000551787 GCOM1H8Y6P7 765 aaPredicted RBP19.35■□□□□ 0.69
BRF1-219ENST00000551787 PQBP1O60828 265 aaKnown RBP19.35■□□□□ 0.69
BRF1-219ENST00000551787 POLR2MP0CAP2 368 aa19.35■□□□□ 0.69
BRF1-219ENST00000551787 CST5P28325 142 aaPredicted RBP19.35■□□□□ 0.69
BRF1-219ENST00000551787 HSD17B4P51659 736 aa19.35■□□□□ 0.69
BRF1-219ENST00000551787 MRPL12P52815 198 aaKnown RBP19.35■□□□□ 0.69
BRF1-219ENST00000551787 FGD1P98174 961 aa19.35■□□□□ 0.69
BRF1-219ENST00000551787 SNX17Q15036 470 aa19.35■□□□□ 0.69
BRF1-219ENST00000551787 DUSP28Q4G0W2 176 aa19.35■□□□□ 0.69
BRF1-219ENST00000551787 CXCL17Q6UXB2 119 aa19.35■□□□□ 0.69
BRF1-219ENST00000551787 COPS5Q92905 334 aa19.35■□□□□ 0.69
BRF1-219ENST00000551787 GLT1D1Q96MS3 346 aa19.35■□□□□ 0.69
BRF1-219ENST00000551787 PRO3102Q9H379 93 aa19.35■□□□□ 0.69
BRF1-219ENST00000551787 PXMP2Q9NR77 195 aa19.35■□□□□ 0.69
BRF1-219ENST00000551787 RBM47A0AV96 593 aaKnown RBP19.34■□□□□ 0.69
BRF1-219ENST00000551787 HMGB1P09429 215 aaKnown RBP19.34■□□□□ 0.69
BRF1-219ENST00000551787 MYCLP12524 364 aaPredicted RBP19.34■□□□□ 0.69
BRF1-219ENST00000551787 APOA5Q6Q788 366 aa19.34■□□□□ 0.69
BRF1-219ENST00000551787 Q6ZUG5 572 aa19.34■□□□□ 0.69
BRF1-219ENST00000551787 SH3RF1Q7Z6J0 888 aa19.34■□□□□ 0.69
BRF1-219ENST00000551787 SCFD2Q8WU76 684 aa19.34■□□□□ 0.69
BRF1-219ENST00000551787 ZFP91Q96JP5 570 aaPredicted RBP19.34■□□□□ 0.69
BRF1-219ENST00000551787 GDF15Q99988 308 aa19.34■□□□□ 0.69
BRF1-219ENST00000551787 MAF1Q9H063 256 aa19.34■□□□□ 0.69
BRF1-219ENST00000551787 PRKAG2Q9UGJ0 569 aa19.34■□□□□ 0.69
BRF1-219ENST00000551787 SEC63Q9UGP8 760 aaKnown RBP19.34■□□□□ 0.69
BRF1-219ENST00000551787 MYH6P13533 1939 aa19.33■□□□□ 0.69
BRF1-219ENST00000551787 KLF18A0A0U1RQI7 1052 aa19.33■□□□□ 0.68
BRF1-219ENST00000551787 ZBTB43O43298 467 aa19.33■□□□□ 0.68
BRF1-219ENST00000551787 ARIH2O95376 493 aa19.33■□□□□ 0.68
BRF1-219ENST00000551787 NR3C2P08235 984 aa19.33■□□□□ 0.68
BRF1-219ENST00000551787 TXNP10599 105 aaKnown RBP19.33■□□□□ 0.68
BRF1-219ENST00000551787 SMARCA1P28370 1054 aa19.33■□□□□ 0.68
BRF1-219ENST00000551787 TRAF1Q13077 416 aa19.33■□□□□ 0.68
BRF1-219ENST00000551787 STXBP2Q15833 593 aa19.33■□□□□ 0.68
BRF1-219ENST00000551787 BLOC1S2Q6QNY1 142 aa19.33■□□□□ 0.68
BRF1-219ENST00000551787 TMTC3Q6ZXV5 915 aa19.33■□□□□ 0.68
BRF1-219ENST00000551787 OR6J1Q8NGC5 347 aa19.33■□□□□ 0.68
BRF1-219ENST00000551787 IWS1Q96ST2 819 aa19.33■□□□□ 0.68
BRF1-219ENST00000551787 USP26Q9BXU7 913 aa19.33■□□□□ 0.68
BRF1-219ENST00000551787 Q9Y3F1 56 aa19.33■□□□□ 0.68
BRF1-219ENST00000551787 NKX3-2P78367 333 aa19.32■□□□□ 0.68
BRF1-219ENST00000551787 GHRHRQ02643 423 aa19.32■□□□□ 0.68
BRF1-219ENST00000551787 APOBRQ0VD83 1088 aa19.32■□□□□ 0.68
BRF1-219ENST00000551787 PPP2R5BQ15173 497 aa19.32■□□□□ 0.68
BRF1-219ENST00000551787 RTN1Q16799 776 aa19.32■□□□□ 0.68
BRF1-219ENST00000551787 C1orf53Q5VUE5 145 aa19.32■□□□□ 0.68
BRF1-219ENST00000551787 IL31RAQ8NI17 732 aa19.32■□□□□ 0.68
BRF1-219ENST00000551787 LBHD1Q9BQE6 289 aaPredicted RBP19.32■□□□□ 0.68
BRF1-219ENST00000551787 ELP1O95163 1332 aa19.31■□□□□ 0.68
BRF1-219ENST00000551787 TRIM43BA6NCK2 446 aa19.31■□□□□ 0.68
BRF1-219ENST00000551787 EIF3JO75822 258 aaKnown RBP19.31■□□□□ 0.68
BRF1-219ENST00000551787 CASTP20810 708 aaKnown RBP19.31■□□□□ 0.68
BRF1-219ENST00000551787 PSMC6P62333 389 aa19.31■□□□□ 0.68
BRF1-219ENST00000551787 TTLL4Q14679 1199 aa19.31■□□□□ 0.68
BRF1-219ENST00000551787 LY6KQ17RY6 165 aa19.31■□□□□ 0.68
BRF1-219ENST00000551787 USP17L6PQ6QN14 398 aa19.31■□□□□ 0.68
BRF1-219ENST00000551787 TRIM43Q96BQ3 446 aaPredicted RBP19.31■□□□□ 0.68
BRF1-219ENST00000551787 PDCD2LQ9BRP1 358 aa19.31■□□□□ 0.68
BRF1-219ENST00000551787 UBE2OQ9C0C9 1292 aaKnown RBP19.31■□□□□ 0.68
BRF1-219ENST00000551787 PDLIM7Q9NR12 457 aa19.31■□□□□ 0.68
BRF1-219ENST00000551787 LAMA3Q16787 3333 aa19.3■□□□□ 0.68
BRF1-219ENST00000551787 GOLGA8AA7E2F4 631 aa19.3■□□□□ 0.68
BRF1-219ENST00000551787 GOLGA8BA8MQT2 603 aa19.3■□□□□ 0.68
BRF1-219ENST00000551787 ZEB2O60315 1214 aa19.3■□□□□ 0.68
BRF1-219ENST00000551787 MYL3P08590 195 aa19.3■□□□□ 0.68
BRF1-219ENST00000551787 RPS6KB1P23443 525 aa19.3■□□□□ 0.68
BRF1-219ENST00000551787 CCDC62Q6P9F0 684 aa19.3■□□□□ 0.68
BRF1-219ENST00000551787 HEATR3Q7Z4Q2 680 aa19.3■□□□□ 0.68
BRF1-219ENST00000551787 BRF1Q92994 677 aa19.3■□□□□ 0.68
BRF1-219ENST00000551787 FAM217BQ9NTX9 383 aaPredicted RBP19.3■□□□□ 0.68
BRF1-219ENST00000551787 TMEM39AQ9NV64 488 aa19.3■□□□□ 0.68
BRF1-219ENST00000551787 MAP3K20Q9NYL2 800 aaKnown RBP19.3■□□□□ 0.68
BRF1-219ENST00000551787 LRRC37A2A6NM11 1700 aa19.29■□□□□ 0.68
BRF1-219ENST00000551787 A0A0U1RQG5 324 aaPredicted RBP19.29■□□□□ 0.68
BRF1-219ENST00000551787 DCDC2CA8MYV0 355 aa19.29■□□□□ 0.68
BRF1-219ENST00000551787 ARVCFO00192 962 aa19.29■□□□□ 0.68
BRF1-219ENST00000551787 CLTBP09497 229 aa19.29■□□□□ 0.68
BRF1-219ENST00000551787 ITGB8P26012 769 aa19.29■□□□□ 0.68
BRF1-219ENST00000551787 CDC27P30260 824 aa19.29■□□□□ 0.68
BRF1-219ENST00000551787 CDK7P50613 346 aa19.29■□□□□ 0.68
BRF1-219ENST00000551787 FAAP100Q0VG06 881 aa19.29■□□□□ 0.68
BRF1-219ENST00000551787 PGM5Q15124 567 aa19.29■□□□□ 0.68
BRF1-219ENST00000551787 VSIG10LQ86VR7 867 aa19.29■□□□□ 0.68
BRF1-219ENST00000551787 PPP1R13LQ8WUF5 828 aa19.29■□□□□ 0.68
BRF1-219ENST00000551787 GPKOWQ92917 476 aaPredicted RBP eCLIP19.29■□□□□ 0.68
BRF1-219ENST00000551787 BADQ92934 168 aa19.29■□□□□ 0.68
BRF1-219ENST00000551787 RBM28Q9NW13 759 aaKnown RBP19.29■□□□□ 0.68
BRF1-219ENST00000551787 V9GY48 417 aaPredicted RBP19.29■□□□□ 0.68
BRF1-219ENST00000551787 GRIN2DO15399 1336 aa19.28■□□□□ 0.68
BRF1-219ENST00000551787 SORBS3O60504 671 aa19.28■□□□□ 0.68
BRF1-219ENST00000551787 PSMA5P28066 241 aa19.28■□□□□ 0.68
BRF1-219ENST00000551787 BMP8BP34820 402 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms