RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 MAMDC2Q7Z304 686 aaPredicted RBP7.11□□□□□ -1.27
CPSF6-206ENST00000550987 TMC3Q7Z5M5 1100 aa7.11□□□□□ -1.27
CPSF6-206ENST00000550987 EZH1Q92800 747 aaPredicted RBP7.11□□□□□ -1.27
CPSF6-206ENST00000550987 FAM46AQ96IP4 442 aaKnown RBP7.11□□□□□ -1.27
CPSF6-206ENST00000550987 PSMG3-AS1Q96PY0 264 aa7.11□□□□□ -1.27
CPSF6-206ENST00000550987 SYT17Q9BSW7 474 aa7.11□□□□□ -1.27
CPSF6-206ENST00000550987 TRIM39Q9HCM9 518 aa7.11□□□□□ -1.27
CPSF6-206ENST00000550987 RNF112Q9ULX5 631 aa7.11□□□□□ -1.27
CPSF6-206ENST00000550987 RREB1Q92766 1687 aa7.11□□□□□ -1.27
CPSF6-206ENST00000550987 ABCA6Q8N139 1617 aa7.11□□□□□ -1.27
CPSF6-206ENST00000550987 CNTNAP5Q8WYK1 1306 aa7.1□□□□□ -1.27
CPSF6-206ENST00000550987 AQP7O14520 342 aa7.1□□□□□ -1.27
CPSF6-206ENST00000550987 SIGLEC6O43699 453 aa7.1□□□□□ -1.27
CPSF6-206ENST00000550987 NPTXRO95502 500 aa7.1□□□□□ -1.27
CPSF6-206ENST00000550987 EOMESO95936 686 aa7.1□□□□□ -1.27
CPSF6-206ENST00000550987 CAPNS1P04632 268 aa7.1□□□□□ -1.27
CPSF6-206ENST00000550987 POU3F3P20264 500 aaPredicted RBP7.1□□□□□ -1.27
CPSF6-206ENST00000550987 SCRN1Q12765 414 aa7.1□□□□□ -1.27
CPSF6-206ENST00000550987 NMIQ13287 307 aaPredicted RBP7.1□□□□□ -1.27
CPSF6-206ENST00000550987 SART3Q15020 963 aaKnown RBP7.1□□□□□ -1.27
CPSF6-206ENST00000550987 PCBP1Q15365 356 aaKnown RBP eCLIP7.1□□□□□ -1.27
CPSF6-206ENST00000550987 PRSS53Q2L4Q9 553 aa7.1□□□□□ -1.27
CPSF6-206ENST00000550987 UVSSAQ2YD98 709 aa7.1□□□□□ -1.27
CPSF6-206ENST00000550987 FGD2Q7Z6J4 655 aa7.1□□□□□ -1.27
CPSF6-206ENST00000550987 STRA8Q7Z7C7 330 aa7.1□□□□□ -1.27
CPSF6-206ENST00000550987 WDR66Q8TBY9 1149 aa7.1□□□□□ -1.27
CPSF6-206ENST00000550987 DCAF4Q8WV16 495 aa7.1□□□□□ -1.27
CPSF6-206ENST00000550987 MYRFLQ96LU7 910 aa7.1□□□□□ -1.27
CPSF6-206ENST00000550987 DUSP23Q9BVJ7 150 aa7.1□□□□□ -1.27
CPSF6-206ENST00000550987 GTF2IRD1Q9UHL9 959 aa7.1□□□□□ -1.27
CPSF6-206ENST00000550987 TRAF6Q9Y4K3 522 aa7.1□□□□□ -1.27
CPSF6-206ENST00000550987 A2MP01023 1474 aa7.1□□□□□ -1.27
CPSF6-206ENST00000550987 WASHC2CQ9Y4E1 1318 aa7.09□□□□□ -1.27
CPSF6-206ENST00000550987 GLI3P10071 1580 aa7.09□□□□□ -1.27
CPSF6-206ENST00000550987 PRAMEF1O95521 474 aa7.09□□□□□ -1.27
CPSF6-206ENST00000550987 CRTAMO95727 393 aa7.09□□□□□ -1.27
CPSF6-206ENST00000550987 GSNP06396 782 aa7.09□□□□□ -1.27
CPSF6-206ENST00000550987 CD3EP07766 207 aa7.09□□□□□ -1.27
CPSF6-206ENST00000550987 FAM87AP0C7U9 286 aa7.09□□□□□ -1.27
CPSF6-206ENST00000550987 NAT1P18440 290 aa7.09□□□□□ -1.27
CPSF6-206ENST00000550987 KIR3DL1P43629 444 aa7.09□□□□□ -1.27
CPSF6-206ENST00000550987 GUCY1A3Q02108 690 aa7.09□□□□□ -1.27
CPSF6-206ENST00000550987 BEND4Q6ZU67 534 aa7.09□□□□□ -1.27
CPSF6-206ENST00000550987 MTDHQ86UE4 582 aaKnown RBP7.09□□□□□ -1.27
CPSF6-206ENST00000550987 FAM20CQ8IXL6 584 aa7.09□□□□□ -1.27
CPSF6-206ENST00000550987 AFAP1L2Q8N4X5 818 aa7.09□□□□□ -1.27
CPSF6-206ENST00000550987 DTWD2Q8NBA8 298 aa7.09□□□□□ -1.27
CPSF6-206ENST00000550987 GSTCDQ8NEC7 633 aa7.09□□□□□ -1.27
CPSF6-206ENST00000550987 ZNF526Q8TF50 670 aaPredicted RBP7.09□□□□□ -1.27
CPSF6-206ENST00000550987 USP7Q93009 1102 aa7.09□□□□□ -1.27
CPSF6-206ENST00000550987 WNK4Q96J92 1243 aa7.09□□□□□ -1.27
CPSF6-206ENST00000550987 C1GALT1Q9NS00 363 aa7.09□□□□□ -1.27
CPSF6-206ENST00000550987 PCDHA9Q9Y5H5 950 aa7.09□□□□□ -1.27
CPSF6-206ENST00000550987 KDM5AP29375 1690 aaKnown RBP7.09□□□□□ -1.27
CPSF6-206ENST00000550987 ABCC3O15438 1527 aa7.08□□□□□ -1.28
CPSF6-206ENST00000550987 C2orf71A6NGG8 1288 aa7.08□□□□□ -1.28
CPSF6-206ENST00000550987 H0Y8X5 98 aa7.08□□□□□ -1.28
CPSF6-206ENST00000550987 DHX15O43143 795 aaKnown RBP7.08□□□□□ -1.28
CPSF6-206ENST00000550987 LEFTY1O75610 366 aa7.08□□□□□ -1.28
CPSF6-206ENST00000550987 SCG5P05408 212 aa7.08□□□□□ -1.28
CPSF6-206ENST00000550987 SCNN1BP51168 640 aa7.08□□□□□ -1.28
CPSF6-206ENST00000550987 ZNF460Q14592 562 aa7.08□□□□□ -1.28
CPSF6-206ENST00000550987 EZH2Q15910 746 aaKnown RBP7.08□□□□□ -1.28
CPSF6-206ENST00000550987 NTRK3Q16288 839 aa7.08□□□□□ -1.28
CPSF6-206ENST00000550987 CDCA2Q69YH5 1023 aaPredicted RBP7.08□□□□□ -1.28
CPSF6-206ENST00000550987 Q6ZS46 218 aa7.08□□□□□ -1.28
CPSF6-206ENST00000550987 ENOX1Q8TC92 643 aaKnown RBP7.08□□□□□ -1.28
CPSF6-206ENST00000550987 SCLYQ96I15 445 aa7.08□□□□□ -1.28
CPSF6-206ENST00000550987 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.08□□□□□ -1.28
CPSF6-206ENST00000550987 SLC5A4Q9NY91 659 aa7.08□□□□□ -1.28
CPSF6-206ENST00000550987 MINPP1Q9UNW1 487 aa7.08□□□□□ -1.28
CPSF6-206ENST00000550987 CASZ1Q86V15 1759 aa7.08□□□□□ -1.28
CPSF6-206ENST00000550987 CNTNAP4Q9C0A0 1308 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 SSU72P8A0A1W2PR75 194 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 TCRBV16S1A1N1A0A5B0 115 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 GNAT3A8MTJ3 354 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 FAM155AB1AL88 458 aaPredicted RBP7.07□□□□□ -1.28
CPSF6-206ENST00000550987 STXBP3O00186 592 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 BRINP1O60477 761 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 ALDH1L1O75891 902 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 RASGRP1O95267 797 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 POU3F2P20265 443 aaPredicted RBP7.07□□□□□ -1.28
CPSF6-206ENST00000550987 SEPHS1P49903 392 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 DHCR24Q15392 516 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 GPR162Q16538 588 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 CYP27C1Q4G0S4 372 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 SLC35F1Q5T1Q4 408 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 PIK3R6Q5UE93 754 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 GPAT2Q6NUI2 795 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 PKN3Q6P5Z2 889 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 KCNT2Q6UVM3 1135 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 SEZ6L2Q6UXD5 910 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 ARHGAP27Q6ZUM4 889 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 DDX53Q86TM3 631 aaKnown RBP7.07□□□□□ -1.28
CPSF6-206ENST00000550987 PPIL6Q8IXY8 311 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 SLC17A8Q8NDX2 589 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 OR2W6PQ8NHA6 318 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 TTC1Q99614 292 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 GPRC5CQ9NQ84 441 aa7.07□□□□□ -1.28
CPSF6-206ENST00000550987 EID1Q9Y6B2 187 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms