RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 PAK2Q13177 524 aa16.66■□□□□ 0.26
PDE1B-207ENST00000550620 TTMPQ5BVD1 217 aa16.66■□□□□ 0.26
PDE1B-207ENST00000550620 MCTP2Q6DN12 878 aa16.66■□□□□ 0.26
PDE1B-207ENST00000550620 ARHGAP27Q6ZUM4 889 aa16.66■□□□□ 0.26
PDE1B-207ENST00000550620 TSEN2Q8NCE0 465 aaKnown RBP16.66■□□□□ 0.26
PDE1B-207ENST00000550620 EDEM3Q9BZQ6 932 aa16.66■□□□□ 0.26
PDE1B-207ENST00000550620 LUC7LQ9NQ29 371 aaKnown RBP16.66■□□□□ 0.26
PDE1B-207ENST00000550620 SSU72P8A0A1W2PR75 194 aa16.65■□□□□ 0.26
PDE1B-207ENST00000550620 STXBP3O00186 592 aa16.65■□□□□ 0.26
PDE1B-207ENST00000550620 NDUFAB1O14561 156 aa16.65■□□□□ 0.26
PDE1B-207ENST00000550620 TFAP4Q01664 338 aa16.65■□□□□ 0.26
PDE1B-207ENST00000550620 STAG2Q8N3U4 1231 aa16.65■□□□□ 0.26
PDE1B-207ENST00000550620 FAM84BQ96KN1 310 aaPredicted RBP16.65■□□□□ 0.26
PDE1B-207ENST00000550620 CEP89Q96ST8 783 aa16.65■□□□□ 0.26
PDE1B-207ENST00000550620 HINFPQ9BQA5 517 aa16.65■□□□□ 0.26
PDE1B-207ENST00000550620 LZTS2Q9BRK4 669 aa16.65■□□□□ 0.26
PDE1B-207ENST00000550620 SEMA6BQ9H3T3 888 aa16.65■□□□□ 0.26
PDE1B-207ENST00000550620 BSDC1Q9NW68 430 aaPredicted RBP16.65■□□□□ 0.26
PDE1B-207ENST00000550620 MAD2L2Q9UI95 211 aa16.65■□□□□ 0.26
PDE1B-207ENST00000550620 BAZ2AQ9UIF9 1905 aaKnown RBP16.65■□□□□ 0.26
PDE1B-207ENST00000550620 LRRC53A6NM62 1247 aa16.65■□□□□ 0.26
PDE1B-207ENST00000550620 ZEB2O60315 1214 aa16.65■□□□□ 0.26
PDE1B-207ENST00000550620 KIAA0754O94854 1291 aa16.65■□□□□ 0.26
PDE1B-207ENST00000550620 CYP2D6P10635 497 aa16.65■□□□□ 0.26
PDE1B-207ENST00000550620 EVX2Q03828 476 aa16.65■□□□□ 0.26
PDE1B-207ENST00000550620 ORC2Q13416 577 aaPredicted RBP16.65■□□□□ 0.26
PDE1B-207ENST00000550620 NONOQ15233 471 aaKnown RBP eCLIP16.65■□□□□ 0.26
PDE1B-207ENST00000550620 SWT1Q5T5J6 900 aaKnown RBP16.65■□□□□ 0.26
PDE1B-207ENST00000550620 CFAP58Q5T655 872 aa16.65■□□□□ 0.26
PDE1B-207ENST00000550620 MICALCLQ6ZW33 695 aa16.65■□□□□ 0.26
PDE1B-207ENST00000550620 RRAGAQ7L523 313 aa16.65■□□□□ 0.26
PDE1B-207ENST00000550620 KIAA0895Q8NCT3 520 aa16.65■□□□□ 0.26
PDE1B-207ENST00000550620 ARL8AQ96BM9 186 aa16.65■□□□□ 0.26
PDE1B-207ENST00000550620 ZIM3Q96PE6 472 aa16.65■□□□□ 0.26
PDE1B-207ENST00000550620 CCNT1O60563 726 aaKnown RBP16.64■□□□□ 0.25
PDE1B-207ENST00000550620 CXCR5P32302 372 aa16.64■□□□□ 0.25
PDE1B-207ENST00000550620 LRRC63Q05C16 580 aa16.64■□□□□ 0.25
PDE1B-207ENST00000550620 INTS5Q6P9B9 1019 aaKnown RBP16.64■□□□□ 0.25
PDE1B-207ENST00000550620 SV2BQ7L1I2 683 aa16.64■□□□□ 0.25
PDE1B-207ENST00000550620 CACNA2D4Q7Z3S7 1137 aa16.64■□□□□ 0.25
PDE1B-207ENST00000550620 PSMB7Q99436 277 aa16.64■□□□□ 0.25
PDE1B-207ENST00000550620 NUCKS1Q9H1E3 243 aaKnown RBP16.64■□□□□ 0.25
PDE1B-207ENST00000550620 EHD4Q9H223 541 aa16.64■□□□□ 0.25
PDE1B-207ENST00000550620 GDF3Q9NR23 364 aa16.64■□□□□ 0.25
PDE1B-207ENST00000550620 A0A1B0GUL6 1792 aa16.64■□□□□ 0.25
PDE1B-207ENST00000550620 LAMB1P07942 1786 aa16.64■□□□□ 0.25
PDE1B-207ENST00000550620 LAMB2P55268 1798 aa16.64■□□□□ 0.25
PDE1B-207ENST00000550620 PVALEFA0A1B0GWK0 134 aa16.64■□□□□ 0.25
PDE1B-207ENST00000550620 LETM2Q2VYF4 491 aa16.64■□□□□ 0.25
PDE1B-207ENST00000550620 KDM7AQ6ZMT4 941 aa16.64■□□□□ 0.25
PDE1B-207ENST00000550620 UNC13DQ70J99 1090 aa16.64■□□□□ 0.25
PDE1B-207ENST00000550620 TLR10Q9BXR5 811 aa16.64■□□□□ 0.25
PDE1B-207ENST00000550620 RBM12Q9NTZ6 932 aaKnown RBP16.64■□□□□ 0.25
PDE1B-207ENST00000550620 MCM9Q9NXL9 1143 aa16.64■□□□□ 0.25
PDE1B-207ENST00000550620 ABCA3Q99758 1704 aa16.63■□□□□ 0.25
PDE1B-207ENST00000550620 CASZ1Q86V15 1759 aa16.63■□□□□ 0.25
PDE1B-207ENST00000550620 EPHB6O15197 1021 aa16.63■□□□□ 0.25
PDE1B-207ENST00000550620 NAP1L1P55209 391 aaKnown RBP16.63■□□□□ 0.25
PDE1B-207ENST00000550620 KLHDC7AQ5VTJ3 777 aa16.63■□□□□ 0.25
PDE1B-207ENST00000550620 PDXDC1Q6P996 788 aa16.63■□□□□ 0.25
PDE1B-207ENST00000550620 FBXO33Q7Z6M2 555 aa16.63■□□□□ 0.25
PDE1B-207ENST00000550620 GUF1Q8N442 669 aaKnown RBP16.63■□□□□ 0.25
PDE1B-207ENST00000550620 MREGQ8N565 214 aa16.63■□□□□ 0.25
PDE1B-207ENST00000550620 ZMYND12Q9H0C1 365 aa16.63■□□□□ 0.25
PDE1B-207ENST00000550620 SLC39A2Q9NP94 309 aa16.63■□□□□ 0.25
PDE1B-207ENST00000550620 STK17AQ9UEE5 414 aa16.63■□□□□ 0.25
PDE1B-207ENST00000550620 ZNF652Q9Y2D9 606 aa16.63■□□□□ 0.25
PDE1B-207ENST00000550620 GRID2IPA4D2P6 1211 aa16.62■□□□□ 0.25
PDE1B-207ENST00000550620 NCK2O43639 380 aa16.62■□□□□ 0.25
PDE1B-207ENST00000550620 GNA11P29992 359 aa16.62■□□□□ 0.25
PDE1B-207ENST00000550620 CRKLP46109 303 aaKnown RBP16.62■□□□□ 0.25
PDE1B-207ENST00000550620 PDCLQ13371 301 aa16.62■□□□□ 0.25
PDE1B-207ENST00000550620 ASTE1Q2TB18 679 aaPredicted RBP16.62■□□□□ 0.25
PDE1B-207ENST00000550620 NEK8Q86SG6 692 aa16.62■□□□□ 0.25
PDE1B-207ENST00000550620 CD302Q8IX05 232 aa16.62■□□□□ 0.25
PDE1B-207ENST00000550620 BAP1Q92560 729 aa16.62■□□□□ 0.25
PDE1B-207ENST00000550620 CCDC43Q96MW1 224 aaKnown RBP16.62■□□□□ 0.25
PDE1B-207ENST00000550620 TSG101Q99816 390 aa16.62■□□□□ 0.25
PDE1B-207ENST00000550620 C6orf50Q9HD87 102 aa16.62■□□□□ 0.25
PDE1B-207ENST00000550620 IL17RBQ9NRM6 502 aa16.62■□□□□ 0.25
PDE1B-207ENST00000550620 GEMIN8Q9NWZ8 242 aaKnown RBP16.62■□□□□ 0.25
PDE1B-207ENST00000550620 SMARCAL1Q9NZC9 954 aa16.62■□□□□ 0.25
PDE1B-207ENST00000550620 MINPP1Q9UNW1 487 aa16.62■□□□□ 0.25
PDE1B-207ENST00000550620 RBAK-RBAKDNI3L0D1 243 aa16.62■□□□□ 0.25
PDE1B-207ENST00000550620 NAPAP54920 295 aa16.62■□□□□ 0.25
PDE1B-207ENST00000550620 MRPS25P82663 173 aaKnown RBP16.62■□□□□ 0.25
PDE1B-207ENST00000550620 RASSF7Q02833 373 aa16.62■□□□□ 0.25
PDE1B-207ENST00000550620 SLC9C1Q4G0N8 1177 aa16.62■□□□□ 0.25
PDE1B-207ENST00000550620 TDRD12Q587J7 1177 aaKnown RBP16.62■□□□□ 0.25
PDE1B-207ENST00000550620 TTC19Q6DKK2 380 aaPredicted RBP16.62■□□□□ 0.25
PDE1B-207ENST00000550620 FOXR2Q6PJQ5 311 aa16.62■□□□□ 0.25
PDE1B-207ENST00000550620 C1orf131Q8NDD1 294 aaKnown RBP16.62■□□□□ 0.25
PDE1B-207ENST00000550620 RABEP2Q9H5N1 569 aa16.62■□□□□ 0.25
PDE1B-207ENST00000550620 EHD2Q9NZN4 543 aa16.62■□□□□ 0.25
PDE1B-207ENST00000550620 SCN7AQ01118 1682 aa16.62■□□□□ 0.25
PDE1B-207ENST00000550620 PHLPP1O60346 1717 aa16.62■□□□□ 0.25
PDE1B-207ENST00000550620 HEXIM1O94992 359 aaKnown RBP16.61■□□□□ 0.25
PDE1B-207ENST00000550620 TECP42680 631 aa16.61■□□□□ 0.25
PDE1B-207ENST00000550620 SETQ01105 290 aaPredicted RBP16.61■□□□□ 0.25
PDE1B-207ENST00000550620 GFPT1Q06210 699 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms