RNA–Protein interactions for RNA: ENST00000550600.5

KRT18-207, Transcript of keratin 18, humanhuman

TSL 1 (best) BASIC

Gene KRT18, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-207ENST00000550600 CCDC47Q96A33 483 aaKnown RBP21.97■■□□□ 1.11
KRT18-207ENST00000550600 CDK5RAP3Q96JB5 506 aa21.97■■□□□ 1.11
KRT18-207ENST00000550600 FAM20AQ96MK3 541 aa21.97■■□□□ 1.11
KRT18-207ENST00000550600 KCNMB3Q9NPA1 279 aa21.97■■□□□ 1.11
KRT18-207ENST00000550600 CTDP1Q9Y5B0 961 aaPredicted RBP21.97■■□□□ 1.11
KRT18-207ENST00000550600 OPLAHO14841 1288 aa21.96■■□□□ 1.11
KRT18-207ENST00000550600 ZBED4O75132 1171 aa21.96■■□□□ 1.11
KRT18-207ENST00000550600 SPP2Q13103 211 aa21.96■■□□□ 1.11
KRT18-207ENST00000550600 MTMR2Q13614 643 aa21.96■■□□□ 1.11
KRT18-207ENST00000550600 SULF1Q8IWU6 871 aa21.96■■□□□ 1.11
KRT18-207ENST00000550600 FAM43AQ8N2R8 423 aa21.96■■□□□ 1.11
KRT18-207ENST00000550600 ENOX1Q8TC92 643 aaKnown RBP21.96■■□□□ 1.11
KRT18-207ENST00000550600 TANGO6Q9C0B7 1094 aa21.96■■□□□ 1.11
KRT18-207ENST00000550600 EMILIN3Q9NT22 766 aa21.96■■□□□ 1.11
KRT18-207ENST00000550600 PPP1R9AQ9ULJ8 1098 aa21.96■■□□□ 1.11
KRT18-207ENST00000550600 PP2D1A8MPX8 630 aa21.95■■□□□ 1.1
KRT18-207ENST00000550600 VCAM1P19320 739 aa21.95■■□□□ 1.1
KRT18-207ENST00000550600 HOXA7P31268 230 aaPredicted RBP21.95■■□□□ 1.1
KRT18-207ENST00000550600 NCAPHQ15003 741 aa21.95■■□□□ 1.1
KRT18-207ENST00000550600 NAALADL2Q58DX5 795 aa21.95■■□□□ 1.1
KRT18-207ENST00000550600 USP50Q70EL3 339 aaPredicted RBP21.95■■□□□ 1.1
KRT18-207ENST00000550600 ZSCAN30Q86W11 494 aa21.95■■□□□ 1.1
KRT18-207ENST00000550600 ZC3H15Q8WU90 426 aaKnown RBP21.95■■□□□ 1.1
KRT18-207ENST00000550600 HAS1Q92839 578 aa21.95■■□□□ 1.1
KRT18-207ENST00000550600 L3MBTL3Q96JM7 780 aaPredicted RBP21.95■■□□□ 1.1
KRT18-207ENST00000550600 SLC38A10Q9HBR0 1119 aa21.95■■□□□ 1.1
KRT18-207ENST00000550600 FBXO28Q9NVF7 368 aa21.95■■□□□ 1.1
KRT18-207ENST00000550600 CCPG1Q9ULG6 757 aa21.95■■□□□ 1.1
KRT18-207ENST00000550600 ESPNB1AK53 854 aa21.95■■□□□ 1.1
KRT18-207ENST00000550600 PPP1R12BO60237 982 aaPredicted RBP21.95■■□□□ 1.1
KRT18-207ENST00000550600 CFBP00751 764 aa21.95■■□□□ 1.1
KRT18-207ENST00000550600 PLCG1P19174 1290 aa21.95■■□□□ 1.1
KRT18-207ENST00000550600 BMP6P22004 513 aa21.95■■□□□ 1.1
KRT18-207ENST00000550600 KCNB1Q14721 858 aa21.95■■□□□ 1.1
KRT18-207ENST00000550600 ZKSCAN4Q969J2 545 aaPredicted RBP21.95■■□□□ 1.1
KRT18-207ENST00000550600 NT5C3AQ9H0P0 336 aa21.95■■□□□ 1.1
KRT18-207ENST00000550600 KDM3AQ9Y4C1 1321 aa21.94■■□□□ 1.1
KRT18-207ENST00000550600 FLOT1O75955 427 aa21.94■■□□□ 1.1
KRT18-207ENST00000550600 ZNF76P36508 570 aa21.94■■□□□ 1.1
KRT18-207ENST00000550600 RBM46Q8TBY0 533 aaKnown RBP21.94■■□□□ 1.1
KRT18-207ENST00000550600 RPAP3Q9H6T3 665 aaPredicted RBP21.94■■□□□ 1.1
KRT18-207ENST00000550600 ZHX2Q9Y6X8 837 aa21.94■■□□□ 1.1
KRT18-207ENST00000550600 POLR2AP24928 1970 aaKnown RBP21.94■■□□□ 1.1
KRT18-207ENST00000550600 RPN1P04843 607 aaKnown RBP21.93■■□□□ 1.1
KRT18-207ENST00000550600 GHRHRQ02643 423 aa21.93■■□□□ 1.1
KRT18-207ENST00000550600 SV2BQ7L1I2 683 aa21.93■■□□□ 1.1
KRT18-207ENST00000550600 DRC7Q8IY82 874 aa21.93■■□□□ 1.1
KRT18-207ENST00000550600 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.93■■□□□ 1.11e-14■□□□□ 11
KRT18-207ENST00000550600 MMTAG2Q9BU76 263 aaKnown RBP21.93■■□□□ 1.1
KRT18-207ENST00000550600 MAF1Q9H063 256 aa21.93■■□□□ 1.1
KRT18-207ENST00000550600 CBFA2T2O43439 604 aa21.92■■□□□ 1.1
KRT18-207ENST00000550600 MSNP26038 577 aaKnown RBP21.92■■□□□ 1.1
KRT18-207ENST00000550600 HOXA13P31271 388 aaPredicted RBP21.92■■□□□ 1.1
KRT18-207ENST00000550600 MAP3K9P80192 1104 aa21.92■■□□□ 1.1
KRT18-207ENST00000550600 CUL4BQ13620 913 aa21.92■■□□□ 1.1
KRT18-207ENST00000550600 DHX8Q14562 1220 aaKnown RBP21.92■■□□□ 1.1
KRT18-207ENST00000550600 ZNF658Q5TYW1 1059 aaPredicted RBP21.92■■□□□ 1.1
KRT18-207ENST00000550600 PRAMEF18Q5VWM3 479 aa21.92■■□□□ 1.1
KRT18-207ENST00000550600 KCTD17Q8N5Z5 321 aa21.92■■□□□ 1.1
KRT18-207ENST00000550600 ERMNQ8TAM6 284 aa21.92■■□□□ 1.1
KRT18-207ENST00000550600 MTRQ99707 1265 aa21.92■■□□□ 1.1
KRT18-207ENST00000550600 C7orf25Q9BPX7 421 aa21.92■■□□□ 1.1
KRT18-207ENST00000550600 TMOD4Q9NZQ9 345 aa21.92■■□□□ 1.1
KRT18-207ENST00000550600 ZNF536O15090 1300 aa21.92■■□□□ 1.1
KRT18-207ENST00000550600 GRIN3BO60391 1043 aa21.91■■□□□ 1.1
KRT18-207ENST00000550600 USP2O75604 605 aaPredicted RBP21.91■■□□□ 1.1
KRT18-207ENST00000550600 PPP1R2P41236 205 aa21.91■■□□□ 1.1
KRT18-207ENST00000550600 HSD17B4P51659 736 aa21.91■■□□□ 1.1
KRT18-207ENST00000550600 HYIQ5T013 277 aa21.91■■□□□ 1.1
KRT18-207ENST00000550600 SAMD1Q6SPF0 538 aaPredicted RBP21.91■■□□□ 1.1
KRT18-207ENST00000550600 FCHSD1Q86WN1 690 aa21.91■■□□□ 1.1
KRT18-207ENST00000550600 SNX29Q8TEQ0 813 aa21.91■■□□□ 1.1
KRT18-207ENST00000550600 NF2P35240 595 aa21.91■■□□□ 1.1
KRT18-207ENST00000550600 IREB2P48200 963 aaKnown RBP21.91■■□□□ 1.1
KRT18-207ENST00000550600 OAZ1P54368 228 aa21.91■■□□□ 1.1
KRT18-207ENST00000550600 PRR16Q569H4 304 aa21.91■■□□□ 1.1
KRT18-207ENST00000550600 HAUS3Q68CZ6 603 aa21.91■■□□□ 1.1
KRT18-207ENST00000550600 ETNPPLQ8TBG4 499 aa21.91■■□□□ 1.1
KRT18-207ENST00000550600 P2RX7Q99572 595 aaKnown RBP21.91■■□□□ 1.1
KRT18-207ENST00000550600 MYPNQ86TC9 1320 aa21.9■■□□□ 1.1
KRT18-207ENST00000550600 GRB10Q13322 594 aa21.9■■□□□ 1.1
KRT18-207ENST00000550600 SH3D19Q5HYK7 790 aa21.9■■□□□ 1.1
KRT18-207ENST00000550600 STAMQ92783 540 aa21.9■■□□□ 1.1
KRT18-207ENST00000550600 AGBL1Q96MI9 1066 aa21.9■■□□□ 1.1
KRT18-207ENST00000550600 BLZF1Q9H2G9 400 aa21.9■■□□□ 1.1
KRT18-207ENST00000550600 ZKSCAN5Q9Y2L8 839 aa21.9■■□□□ 1.1
KRT18-207ENST00000550600 CSADQ9Y600 493 aa21.9■■□□□ 1.1
KRT18-207ENST00000550600 SSC5DA1L4H1 1573 aa21.89■■□□□ 1.1
KRT18-207ENST00000550600 RHOBTB3O94955 611 aa21.89■■□□□ 1.1
KRT18-207ENST00000550600 STIM1Q13586 685 aa21.89■■□□□ 1.1
KRT18-207ENST00000550600 TMEM119Q4V9L6 283 aa21.89■■□□□ 1.1
KRT18-207ENST00000550600 LARP4BQ92615 738 aaKnown RBP21.89■■□□□ 1.1
KRT18-207ENST00000550600 AFG3L2Q9Y4W6 797 aa21.89■■□□□ 1.1
KRT18-207ENST00000550600 PHIPQ8WWQ0 1821 aa21.89■■□□□ 1.09
KRT18-207ENST00000550600 SMCHD1A6NHR9 2005 aa21.89■■□□□ 1.09
KRT18-207ENST00000550600 POTEMA6NI47 508 aa21.88■■□□□ 1.09
KRT18-207ENST00000550600 SETQ01105 290 aaPredicted RBP21.88■■□□□ 1.09
KRT18-207ENST00000550600 COG2Q14746 738 aa21.88■■□□□ 1.09
KRT18-207ENST00000550600 SPATA1Q5VX52 437 aa21.88■■□□□ 1.09
KRT18-207ENST00000550600 CNNM4Q6P4Q7 775 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms