RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 CAPN7Q9Y6W3 813 aa11.96□□□□□ -0.5
SMARCC2-208ENST00000550150 USO1O60763 962 aaKnown RBP11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 KIAA0754O94854 1291 aa11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 PRPF6O94906 941 aaKnown RBP11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 BMP15O95972 392 aa11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 CYP2D6P10635 497 aa11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 SCG2P13521 617 aa11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 INPP5BP32019 993 aa11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 DYMQ7RTS9 669 aa11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 EFCAB13Q8IY85 973 aa11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 PROCA1Q8NCQ7 364 aaPredicted RBP11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 EHBP1Q8NDI1 1231 aa11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 ARL8AQ96BM9 186 aa11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 NLRC4Q9NPP4 1024 aa11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 DUOX1Q9NRD9 1551 aa11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 AGPSO00116 658 aa11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 PRPF3O43395 683 aaKnown RBP11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 HSF2BPO75031 334 aa11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 TACC1O75410 805 aa11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 GOLGA8HP0CJ92 632 aa11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 SLC15A2Q16348 729 aa11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 LETM2Q2VYF4 491 aa11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 IQCEQ6IPM2 695 aa11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 RRAGAQ7L523 313 aa11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 BCCIPQ9P287 314 aaKnown RBP eCLIP11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 STX8Q9UNK0 236 aa11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 ZNF804BA4D1E1 1349 aa11.95□□□□□ -0.5
SMARCC2-208ENST00000550150 PAFAH1B1P43034 410 aa11.94□□□□□ -0.5
SMARCC2-208ENST00000550150 C8orf74Q6P047 294 aa11.94□□□□□ -0.5
SMARCC2-208ENST00000550150 CACNA2D4Q7Z3S7 1137 aa11.94□□□□□ -0.5
SMARCC2-208ENST00000550150 KANSL2Q9H9L4 492 aa11.94□□□□□ -0.5
SMARCC2-208ENST00000550150 DISC1Q9NRI5 854 aa11.94□□□□□ -0.5
SMARCC2-208ENST00000550150 PACSIN2Q9UNF0 486 aaPredicted RBP11.94□□□□□ -0.5
SMARCC2-208ENST00000550150 CDK5RAP2Q96SN8 1893 aa11.94□□□□□ -0.5
SMARCC2-208ENST00000550150 SSBP05455 408 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMARCC2-208ENST00000550150 DNM2P50570 870 aa11.94□□□□□ -0.5
SMARCC2-208ENST00000550150 APBA1Q02410 837 aa11.94□□□□□ -0.5
SMARCC2-208ENST00000550150 RASSF7Q02833 373 aa11.94□□□□□ -0.5
SMARCC2-208ENST00000550150 SEC23AQ15436 765 aa11.94□□□□□ -0.5
SMARCC2-208ENST00000550150 MAATS1Q7Z4T9 603 aa11.94□□□□□ -0.5
SMARCC2-208ENST00000550150 TMEM60Q9H2L4 133 aa11.94□□□□□ -0.5
SMARCC2-208ENST00000550150 TROAPQ12815 778 aa11.94□□□□□ -0.5
SMARCC2-208ENST00000550150 HLTFQ14527 1009 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMARCC2-208ENST00000550150 TMTC3Q6ZXV5 915 aa11.94□□□□□ -0.5
SMARCC2-208ENST00000550150 ADSSL1Q8N142 457 aa11.94□□□□□ -0.5
SMARCC2-208ENST00000550150 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMARCC2-208ENST00000550150 FAM184BQ9ULE4 1060 aa11.94□□□□□ -0.5
SMARCC2-208ENST00000550150 CAPN11Q9UMQ6 739 aa11.94□□□□□ -0.5
SMARCC2-208ENST00000550150 FAM205AQ6ZU69 1335 aa11.93□□□□□ -0.5
SMARCC2-208ENST00000550150 ZNF646O15015 1829 aaPredicted RBP11.93□□□□□ -0.5
SMARCC2-208ENST00000550150 A0A087WUV0 522 aaPredicted RBP11.93□□□□□ -0.5
SMARCC2-208ENST00000550150 GPSM2P81274 684 aa11.93□□□□□ -0.5
SMARCC2-208ENST00000550150 GUCY1A3Q02108 690 aa11.93□□□□□ -0.5
SMARCC2-208ENST00000550150 GRIK5Q16478 980 aa11.93□□□□□ -0.5
SMARCC2-208ENST00000550150 ANKRD40Q6AI12 368 aa11.93□□□□□ -0.5
SMARCC2-208ENST00000550150 CCDC155Q8N6L0 562 aa11.93□□□□□ -0.5
SMARCC2-208ENST00000550150 TSEN2Q8NCE0 465 aaKnown RBP11.93□□□□□ -0.5
SMARCC2-208ENST00000550150 SPATA4Q8NEY3 305 aa11.93□□□□□ -0.5
SMARCC2-208ENST00000550150 NOC3LQ8WTT2 800 aaKnown RBP11.93□□□□□ -0.5
SMARCC2-208ENST00000550150 CCDC43Q96MW1 224 aaKnown RBP11.93□□□□□ -0.5
SMARCC2-208ENST00000550150 NFU1Q9UMS0 254 aa11.93□□□□□ -0.5
SMARCC2-208ENST00000550150 QSER1Q2KHR3 1735 aa11.93□□□□□ -0.5
SMARCC2-208ENST00000550150 SLX4Q8IY92 1834 aa11.93□□□□□ -0.5
SMARCC2-208ENST00000550150 NID2Q14112 1375 aa11.93□□□□□ -0.5
SMARCC2-208ENST00000550150 BACH1O14867 736 aa11.93□□□□□ -0.5
SMARCC2-208ENST00000550150 EIF4A3P38919 411 aaKnown RBP11.93□□□□□ -0.5
SMARCC2-208ENST00000550150 STK4Q13043 487 aa11.93□□□□□ -0.5
SMARCC2-208ENST00000550150 GRAPQ13588 217 aa11.93□□□□□ -0.5
SMARCC2-208ENST00000550150 STAG2Q8N3U4 1231 aa11.93□□□□□ -0.5
SMARCC2-208ENST00000550150 OTUD6BQ8N6M0 293 aa11.93□□□□□ -0.5
SMARCC2-208ENST00000550150 GRAPLQ8TC17 118 aaPredicted RBP11.93□□□□□ -0.5
SMARCC2-208ENST00000550150 KAT2BQ92831 832 aa11.93□□□□□ -0.5
SMARCC2-208ENST00000550150 CCDC47Q96A33 483 aaKnown RBP11.93□□□□□ -0.5
SMARCC2-208ENST00000550150 KLRG2A4D1S0 409 aaPredicted RBP11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 LRRC10BA6NIK2 292 aa11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 MYO1FO00160 1098 aa11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 TECP42680 631 aa11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 GUCY2DQ02846 1103 aa11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 GFPT1Q06210 699 aaPredicted RBP11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 BLIDQ8IZY5 108 aa11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 ALS2CR12Q96Q35 445 aa11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 RBM28Q9NW13 759 aaKnown RBP11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 FTCDO95954 541 aa11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 MAGEA1P43355 309 aa11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 PPFIA1Q13136 1202 aa11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 PAPD7Q5XG87 772 aaKnown RBP11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 KLHL7Q8IXQ5 586 aa11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 DNAJC7Q99615 494 aa11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 VIPAS39Q9H9C1 493 aa11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 TCP11L1Q9NUJ3 509 aa11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 FOCADQ5VW36 1801 aa11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 EPHB6O15197 1021 aa11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 CCNT1O60563 726 aaKnown RBP11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 PLCG1P19174 1290 aa11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 KIF11P52732 1056 aa11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 SEC24CP53992 1094 aa11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 LRRC41Q15345 812 aa11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 NPY5RQ15761 445 aa11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 EPB41L5Q9HCM4 733 aa11.92□□□□□ -0.5
SMARCC2-208ENST00000550150 PPANQ9NQ55 473 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms