RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 DAGLAQ9Y4D2 1042 aa16.56■□□□□ 0.24
CUX1-214ENST00000550008 AP5Z1O43299 807 aa16.56■□□□□ 0.24
CUX1-214ENST00000550008 SF3A3Q12874 501 aaKnown RBP eCLIP16.56■□□□□ 0.24
CUX1-214ENST00000550008 GRM4Q14833 912 aa16.56■□□□□ 0.24
CUX1-214ENST00000550008 SLFN12Q8IYM2 578 aa16.56■□□□□ 0.24
CUX1-214ENST00000550008 PIGOQ8TEQ8 1089 aa16.56■□□□□ 0.24
CUX1-214ENST00000550008 EPC1Q9H2F5 836 aa16.56■□□□□ 0.24
CUX1-214ENST00000550008 BHMT2Q9H2M3 363 aa16.56■□□□□ 0.24
CUX1-214ENST00000550008 FGFR2P21802 821 aa16.55■□□□□ 0.24
CUX1-214ENST00000550008 TCP11X2Q5H9J9 407 aa16.55■□□□□ 0.24
CUX1-214ENST00000550008 DHTKD1Q96HY7 919 aaPredicted RBP16.55■□□□□ 0.24
CUX1-214ENST00000550008 K7ENM7 598 aa16.55■□□□□ 0.24
CUX1-214ENST00000550008 HSPA1LP34931 641 aa16.55■□□□□ 0.24
CUX1-214ENST00000550008 CFAP58Q5T655 872 aa16.55■□□□□ 0.24
CUX1-214ENST00000550008 TMC4Q7Z404 712 aa16.55■□□□□ 0.24
CUX1-214ENST00000550008 ZNF579Q8NAF0 562 aaKnown RBP16.55■□□□□ 0.24
CUX1-214ENST00000550008 ENGASEQ8NFI3 743 aa16.55■□□□□ 0.24
CUX1-214ENST00000550008 IRX2Q9BZI1 471 aaPredicted RBP16.55■□□□□ 0.24
CUX1-214ENST00000550008 E9PMD0 336 aa16.55■□□□□ 0.24
CUX1-214ENST00000550008 TNNC1P63316 161 aa16.55■□□□□ 0.24
CUX1-214ENST00000550008 CTTNQ14247 550 aaKnown RBP16.55■□□□□ 0.24
CUX1-214ENST00000550008 VWA3BQ502W6 1294 aa16.55■□□□□ 0.24
CUX1-214ENST00000550008 NEDD1Q8NHV4 660 aa16.55■□□□□ 0.24
CUX1-214ENST00000550008 DDX12PQ92771 950 aa16.55■□□□□ 0.24
CUX1-214ENST00000550008 HAUS4Q9H6D7 363 aa16.55■□□□□ 0.24
CUX1-214ENST00000550008 BARHL2Q9NY43 387 aa16.55■□□□□ 0.24
CUX1-214ENST00000550008 PLA2G4BP0C869 781 aa16.54■□□□□ 0.24
CUX1-214ENST00000550008 OAS2P29728 719 aaKnown RBP16.54■□□□□ 0.24
CUX1-214ENST00000550008 SYDE2Q5VT97 1194 aa16.54■□□□□ 0.24
CUX1-214ENST00000550008 ARHGEF16Q5VV41 709 aa16.54■□□□□ 0.24
CUX1-214ENST00000550008 ECE2O60344 883 aa16.54■□□□□ 0.24
CUX1-214ENST00000550008 EEF1GP26641 437 aaKnown RBP16.54■□□□□ 0.24
CUX1-214ENST00000550008 HPDP32754 393 aaPredicted RBP16.54■□□□□ 0.24
CUX1-214ENST00000550008 FKBP3Q00688 224 aaKnown RBP16.54■□□□□ 0.24
CUX1-214ENST00000550008 TROAPQ12815 778 aa16.54■□□□□ 0.24
CUX1-214ENST00000550008 DHX36Q9H2U1 1008 aaKnown RBP16.54■□□□□ 0.24
CUX1-214ENST00000550008 COL4A3BPQ9Y5P4 624 aa16.54■□□□□ 0.24
CUX1-214ENST00000550008 PRPF6O94906 941 aaKnown RBP16.54■□□□□ 0.24
CUX1-214ENST00000550008 NF2P35240 595 aa16.54■□□□□ 0.24
CUX1-214ENST00000550008 STAT2P52630 851 aa16.54■□□□□ 0.24
CUX1-214ENST00000550008 SMC1AQ14683 1233 aaKnown RBP16.54■□□□□ 0.24
CUX1-214ENST00000550008 COL5A2P05997 1499 aaPredicted RBP16.54■□□□□ 0.24
CUX1-214ENST00000550008 FCER1AP12319 257 aa16.54■□□□□ 0.24
CUX1-214ENST00000550008 PEX26Q7Z412 305 aa16.54■□□□□ 0.24
CUX1-214ENST00000550008 UBLCP1Q8WVY7 318 aaPredicted RBP16.54■□□□□ 0.24
CUX1-214ENST00000550008 DLATP10515 647 aaKnown RBP16.53■□□□□ 0.24
CUX1-214ENST00000550008 STAT3P40763 770 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 ATP2C1P98194 919 aaPredicted RBP16.53■□□□□ 0.24
CUX1-214ENST00000550008 RPS6KA1Q15418 735 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 NAA35Q5VZE5 725 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 IFT74Q96LB3 600 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 ZNF577Q9BSK1 485 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 PHF20Q9BVI0 1012 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 PCIF1Q9H4Z3 704 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.53■□□□□ 0.24
CUX1-214ENST00000550008 ZNF277Q9NRM2 450 aaPredicted RBP16.53■□□□□ 0.24
CUX1-214ENST00000550008 FLT1P17948 1338 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 POTEB3A0JP26 581 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 POTECB2RU33 542 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 STAT1P42224 750 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 EHHADHQ08426 723 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 QRICH1Q2TAL8 776 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 POTEBQ6S5H4 581 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 CUEDC2Q9H467 287 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 F5H6K3 240 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 KCNK3O14649 394 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 FOSP01100 380 aaPredicted RBP16.53■□□□□ 0.24
CUX1-214ENST00000550008 ADRA2BP18089 450 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 KLRC3Q07444 240 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 GSTA5Q7RTV2 222 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 HOOK3Q86VS8 718 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 ADGRF4Q8IZF3 695 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 MTA3Q9BTC8 594 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 PLVAPQ9BX97 442 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 EMILIN3Q9NT22 766 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 IFT172Q9UG01 1749 aa16.53■□□□□ 0.24
CUX1-214ENST00000550008 DESP17661 470 aa16.52■□□□□ 0.24
CUX1-214ENST00000550008 EIF2AK2P19525 551 aaKnown RBP16.52■□□□□ 0.24
CUX1-214ENST00000550008 GRIPAP1Q4V328 841 aa16.52■□□□□ 0.24
CUX1-214ENST00000550008 GPR161Q8N6U8 529 aaKnown RBP16.52■□□□□ 0.24
CUX1-214ENST00000550008 TMEM60Q9H2L4 133 aa16.52■□□□□ 0.24
CUX1-214ENST00000550008 EFCAB8A8MWE9 144 aa16.52■□□□□ 0.24
CUX1-214ENST00000550008 ZBTB5O15062 677 aa16.52■□□□□ 0.24
CUX1-214ENST00000550008 MFAP3LO75121 409 aa16.52■□□□□ 0.24
CUX1-214ENST00000550008 LRRN2O75325 713 aa16.52■□□□□ 0.24
CUX1-214ENST00000550008 RASA1P20936 1047 aa16.52■□□□□ 0.24
CUX1-214ENST00000550008 GUCY2FP51841 1108 aa16.52■□□□□ 0.24
CUX1-214ENST00000550008 EXOC3L4Q17RC7 722 aa16.52■□□□□ 0.24
CUX1-214ENST00000550008 RIOK1Q9BRS2 568 aaKnown RBP16.52■□□□□ 0.24
CUX1-214ENST00000550008 LARSQ9P2J5 1176 aaKnown RBP16.52■□□□□ 0.24
CUX1-214ENST00000550008 CDC23Q9UJX2 597 aa16.52■□□□□ 0.24
CUX1-214ENST00000550008 NOP56O00567 594 aaKnown RBP16.52■□□□□ 0.23
CUX1-214ENST00000550008 MAP2K1Q02750 393 aaPredicted RBP16.52■□□□□ 0.23
CUX1-214ENST00000550008 TNFAIP1Q13829 316 aa16.52■□□□□ 0.23
CUX1-214ENST00000550008 FAM83BQ5T0W9 1011 aa16.52■□□□□ 0.23
CUX1-214ENST00000550008 TNNI1P19237 187 aa16.52■□□□□ 0.23
CUX1-214ENST00000550008 DAAM2Q86T65 1068 aa16.52■□□□□ 0.23
CUX1-214ENST00000550008 PPM1KQ8N3J5 372 aa16.52■□□□□ 0.23
CUX1-214ENST00000550008 NDST4Q9H3R1 872 aa16.52■□□□□ 0.23
CUX1-214ENST00000550008 RASGRP2Q7LDG7 609 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms