RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 PDCD2LQ9BRP1 358 aa13.72□□□□□ -0.21
PFDN5-208ENST00000549995 ZMYND12Q9H0C1 365 aa13.72□□□□□ -0.21
PFDN5-208ENST00000549995 GLT8D2Q9H1C3 349 aa13.72□□□□□ -0.21
PFDN5-208ENST00000549995 RIC8AQ9NPQ8 531 aa13.72□□□□□ -0.21
PFDN5-208ENST00000549995 SH3GLB2Q9NR46 395 aa13.72□□□□□ -0.21
PFDN5-208ENST00000549995 PXMP2Q9NR77 195 aa13.72□□□□□ -0.21
PFDN5-208ENST00000549995 CNPY2Q9Y2B0 182 aa13.72□□□□□ -0.21
PFDN5-208ENST00000549995 MYH7BA7E2Y1 1941 aa13.71□□□□□ -0.21
PFDN5-208ENST00000549995 B4DLN1 442 aa13.71□□□□□ -0.21
PFDN5-208ENST00000549995 TNRC18O15417 2968 aaPredicted RBP13.71□□□□□ -0.21
PFDN5-208ENST00000549995 ADCY6O43306 1168 aa13.71□□□□□ -0.21
PFDN5-208ENST00000549995 CDKL5O76039 1030 aa13.71□□□□□ -0.21
PFDN5-208ENST00000549995 DEXIO95424 95 aa13.71□□□□□ -0.21
PFDN5-208ENST00000549995 CTDNEP1O95476 244 aa13.71□□□□□ -0.21
PFDN5-208ENST00000549995 MRPL12P52815 198 aaKnown RBP13.71□□□□□ -0.21
PFDN5-208ENST00000549995 SOX10P56693 466 aa13.71□□□□□ -0.21
PFDN5-208ENST00000549995 CPLX2Q6PUV4 134 aaKnown RBP13.71□□□□□ -0.21
PFDN5-208ENST00000549995 HEATR3Q7Z4Q2 680 aa13.71□□□□□ -0.21
PFDN5-208ENST00000549995 GPKOWQ92917 476 aaPredicted RBP eCLIP13.71□□□□□ -0.21
PFDN5-208ENST00000549995 PHKBQ93100 1093 aa13.71□□□□□ -0.21
PFDN5-208ENST00000549995 RMDN3Q96TC7 470 aa13.71□□□□□ -0.21
PFDN5-208ENST00000549995 UPF3AQ9H1J1 476 aaKnown RBP13.71□□□□□ -0.21
PFDN5-208ENST00000549995 SLKQ9H2G2 1235 aaPredicted RBP13.71□□□□□ -0.21
PFDN5-208ENST00000549995 NAP1L2Q9ULW6 460 aaPredicted RBP13.71□□□□□ -0.21
PFDN5-208ENST00000549995 LIMCH1Q9UPQ0 1083 aa13.71□□□□□ -0.21
PFDN5-208ENST00000549995 ADAMTS4O75173 837 aa13.7□□□□□ -0.22
PFDN5-208ENST00000549995 STAM2O75886 525 aa13.7□□□□□ -0.22
PFDN5-208ENST00000549995 COL6A1P12109 1028 aa13.7□□□□□ -0.22
PFDN5-208ENST00000549995 EN2P19622 333 aaPredicted RBP13.7□□□□□ -0.22
PFDN5-208ENST00000549995 CST5P28325 142 aaPredicted RBP13.7□□□□□ -0.22
PFDN5-208ENST00000549995 PGM5Q15124 567 aa13.7□□□□□ -0.22
PFDN5-208ENST00000549995 PRAMEF19Q5SWL8 479 aa13.7□□□□□ -0.22
PFDN5-208ENST00000549995 XRRA1Q6P2D8 792 aa13.7□□□□□ -0.22
PFDN5-208ENST00000549995 VSIG10LQ86VR7 867 aa13.7□□□□□ -0.22
PFDN5-208ENST00000549995 CCDC12Q8WUD4 166 aaPredicted RBP13.7□□□□□ -0.22
PFDN5-208ENST00000549995 PIBF1Q8WXW3 757 aa13.7□□□□□ -0.22
PFDN5-208ENST00000549995 CUL5Q93034 780 aa13.7□□□□□ -0.22
PFDN5-208ENST00000549995 ZSCAN31Q96LW9 406 aaPredicted RBP13.7□□□□□ -0.22
PFDN5-208ENST00000549995 LARP6Q9BRS8 491 aaKnown RBP13.7□□□□□ -0.22
PFDN5-208ENST00000549995 PSTPIP2Q9H939 334 aa13.7□□□□□ -0.22
PFDN5-208ENST00000549995 FAM184BQ9ULE4 1060 aa13.7□□□□□ -0.22
PFDN5-208ENST00000549995 GNEQ9Y223 722 aaKnown RBP13.7□□□□□ -0.22
PFDN5-208ENST00000549995 Q9Y3F1 56 aa13.7□□□□□ -0.22
PFDN5-208ENST00000549995 DUSP11O75319 330 aaKnown RBP13.69□□□□□ -0.22
PFDN5-208ENST00000549995 NR3C2P08235 984 aa13.69□□□□□ -0.22
PFDN5-208ENST00000549995 HOXA13P31271 388 aaPredicted RBP13.69□□□□□ -0.22
PFDN5-208ENST00000549995 NAPAP54920 295 aa13.69□□□□□ -0.22
PFDN5-208ENST00000549995 SSRP1Q08945 709 aaKnown RBP13.69□□□□□ -0.22
PFDN5-208ENST00000549995 STK3Q13188 491 aa13.69□□□□□ -0.22
PFDN5-208ENST00000549995 AP3B2Q13367 1082 aa13.69□□□□□ -0.22
PFDN5-208ENST00000549995 CCDC144BQ3MJ40 725 aa13.69□□□□□ -0.22
PFDN5-208ENST00000549995 MCTP2Q6DN12 878 aa13.69□□□□□ -0.22
PFDN5-208ENST00000549995 IQSEC1Q6DN90 963 aa13.69□□□□□ -0.22
PFDN5-208ENST00000549995 USP17L6PQ6QN14 398 aa13.69□□□□□ -0.22
PFDN5-208ENST00000549995 TRIM22Q8IYM9 498 aa13.69□□□□□ -0.22
PFDN5-208ENST00000549995 DAGLBQ8NCG7 672 aa13.69□□□□□ -0.22
PFDN5-208ENST00000549995 NSUN7Q8NE18 718 aaKnown RBP13.69□□□□□ -0.22
PFDN5-208ENST00000549995 CCDC148Q8NFR7 591 aa13.69□□□□□ -0.22
PFDN5-208ENST00000549995 SMARCC2Q8TAQ2 1214 aa13.69□□□□□ -0.22
PFDN5-208ENST00000549995 CRYGNQ8WXF5 182 aa13.69□□□□□ -0.22
PFDN5-208ENST00000549995 SLC26A6Q9BXS9 759 aa13.69□□□□□ -0.22
PFDN5-208ENST00000549995 SH2B1Q9NRF2 756 aaPredicted RBP13.69□□□□□ -0.22
PFDN5-208ENST00000549995 SYNRGQ9UMZ2 1314 aa13.68□□□□□ -0.22
PFDN5-208ENST00000549995 CPLX1O14810 134 aa13.68□□□□□ -0.22
PFDN5-208ENST00000549995 CTAGE5O15320 804 aa13.68□□□□□ -0.22
PFDN5-208ENST00000549995 EIF3JO75822 258 aaKnown RBP13.68□□□□□ -0.22
PFDN5-208ENST00000549995 RGS20O76081 388 aa13.68□□□□□ -0.22
PFDN5-208ENST00000549995 FOSP01100 380 aaPredicted RBP13.68□□□□□ -0.22
PFDN5-208ENST00000549995 FDPSP14324 419 aaKnown RBP13.68□□□□□ -0.22
PFDN5-208ENST00000549995 MCM2P49736 904 aa13.68□□□□□ -0.22
PFDN5-208ENST00000549995 ADCY7P51828 1080 aa13.68□□□□□ -0.22
PFDN5-208ENST00000549995 GJA9P57773 515 aa13.68□□□□□ -0.22
PFDN5-208ENST00000549995 PDE4DQ08499 809 aa13.68□□□□□ -0.22
PFDN5-208ENST00000549995 NPY5RQ15761 445 aa13.68□□□□□ -0.22
PFDN5-208ENST00000549995 STXBP2Q15833 593 aa13.68□□□□□ -0.22
PFDN5-208ENST00000549995 DUSP28Q4G0W2 176 aa13.68□□□□□ -0.22
PFDN5-208ENST00000549995 ARHGEF16Q5VV41 709 aa13.68□□□□□ -0.22
PFDN5-208ENST00000549995 PCNX4Q63HM2 1172 aa13.68□□□□□ -0.22
PFDN5-208ENST00000549995 CCDC62Q6P9F0 684 aa13.68□□□□□ -0.22
PFDN5-208ENST00000549995 FBXO16Q8IX29 292 aaPredicted RBP13.68□□□□□ -0.22
PFDN5-208ENST00000549995 KLHDC9Q8NEP7 349 aa13.68□□□□□ -0.22
PFDN5-208ENST00000549995 IL31RAQ8NI17 732 aa13.68□□□□□ -0.22
PFDN5-208ENST00000549995 INPP4AQ96PE3 977 aaPredicted RBP13.68□□□□□ -0.22
PFDN5-208ENST00000549995 LLPHQ9BRT6 129 aaKnown RBP13.68□□□□□ -0.22
PFDN5-208ENST00000549995 ZHX1Q9UKY1 873 aaPredicted RBP13.68□□□□□ -0.22
PFDN5-208ENST00000549995 DDX49Q9Y6V7 483 aaKnown RBP13.68□□□□□ -0.22
PFDN5-208ENST00000549995 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.67□□□□□ -0.22
PFDN5-208ENST00000549995 SMCO2A6NFE2 343 aa13.67□□□□□ -0.22
PFDN5-208ENST00000549995 M0R2N6 131 aa13.67□□□□□ -0.22
PFDN5-208ENST00000549995 DNM1LO00429 736 aa13.67□□□□□ -0.22
PFDN5-208ENST00000549995 NKRFO15226 690 aaKnown RBP eCLIP13.67□□□□□ -0.22
PFDN5-208ENST00000549995 ST18O60284 1047 aa13.67□□□□□ -0.22
PFDN5-208ENST00000549995 MYCP01106 439 aaPredicted RBP13.67□□□□□ -0.22
PFDN5-208ENST00000549995 RARBP10826 455 aa13.67□□□□□ -0.22
PFDN5-208ENST00000549995 EIF2AK2P19525 551 aaKnown RBP13.67□□□□□ -0.22
PFDN5-208ENST00000549995 CCND2P30279 289 aa13.67□□□□□ -0.22
PFDN5-208ENST00000549995 ICAM3P32942 547 aa13.67□□□□□ -0.22
PFDN5-208ENST00000549995 MRPS9P82933 396 aaKnown RBP13.67□□□□□ -0.22
PFDN5-208ENST00000549995 AKAP17AQ02040 695 aaKnown RBP13.67□□□□□ -0.22
PFDN5-208ENST00000549995 CCSAPQ6IQ19 270 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms