RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 IFNGR1P15260 489 aa6.18□□□□□ -1.42
SCAF11-210ENST00000547654 MAGEA10P43363 369 aaPredicted RBP6.18□□□□□ -1.42
SCAF11-210ENST00000547654 ZDHHC15Q96MV8 337 aa6.18□□□□□ -1.42
SCAF11-210ENST00000547654 NOL6Q9H6R4 1146 aaKnown RBP6.18□□□□□ -1.42
SCAF11-210ENST00000547654 PHAXQ9H814 394 aaKnown RBP6.18□□□□□ -1.42
SCAF11-210ENST00000547654 SMPD4Q9NXE4 827 aa6.18□□□□□ -1.42
SCAF11-210ENST00000547654 NTMQ9P121 344 aa6.18□□□□□ -1.42
SCAF11-210ENST00000547654 ANKRD62A6NC57 917 aa6.17□□□□□ -1.42
SCAF11-210ENST00000547654 ITGA4P13612 1032 aa6.17□□□□□ -1.42
SCAF11-210ENST00000547654 PMLP29590 882 aa6.17□□□□□ -1.42
SCAF11-210ENST00000547654 POU4F1Q01851 419 aa6.17□□□□□ -1.42
SCAF11-210ENST00000547654 GNL2Q13823 731 aaKnown RBP6.17□□□□□ -1.42
SCAF11-210ENST00000547654 ANKRD13AQ8IZ07 590 aa6.17□□□□□ -1.42
SCAF11-210ENST00000547654 ARHGEF39Q8N4T4 335 aa6.17□□□□□ -1.42
SCAF11-210ENST00000547654 GMLQ99445 158 aa6.17□□□□□ -1.42
SCAF11-210ENST00000547654 LNPKQ9C0E8 428 aa6.17□□□□□ -1.42
SCAF11-210ENST00000547654 RXFP1Q9HBX9 757 aa6.17□□□□□ -1.42
SCAF11-210ENST00000547654 NUDT5Q9UKK9 219 aa6.17□□□□□ -1.42
SCAF11-210ENST00000547654 NOBOXO60393 691 aa6.16□□□□□ -1.42
SCAF11-210ENST00000547654 EPHX1P07099 455 aa6.16□□□□□ -1.42
SCAF11-210ENST00000547654 GLI4P10075 376 aa6.16□□□□□ -1.42
SCAF11-210ENST00000547654 FBXW10Q5XX13 1052 aa6.16□□□□□ -1.42
SCAF11-210ENST00000547654 DPH6Q7L8W6 267 aa6.16□□□□□ -1.42
SCAF11-210ENST00000547654 TSPAN17Q96FV3 270 aa6.16□□□□□ -1.42
SCAF11-210ENST00000547654 RCC1LQ96I51 464 aaKnown RBP6.16□□□□□ -1.42
SCAF11-210ENST00000547654 DNAJC2Q99543 621 aaKnown RBP6.16□□□□□ -1.42
SCAF11-210ENST00000547654 BCAS3Q9H6U6 928 aa6.16□□□□□ -1.42
SCAF11-210ENST00000547654 STRIP2Q9ULQ0 834 aa6.16□□□□□ -1.42
SCAF11-210ENST00000547654 DUSP10Q9Y6W6 482 aa6.16□□□□□ -1.42
SCAF11-210ENST00000547654 SARSP49591 514 aaKnown RBP6.15□□□□□ -1.42
SCAF11-210ENST00000547654 ADAM17P78536 824 aa6.15□□□□□ -1.42
SCAF11-210ENST00000547654 DLX2Q07687 328 aaPredicted RBP6.15□□□□□ -1.42
SCAF11-210ENST00000547654 LZTR1Q8N653 840 aa6.15□□□□□ -1.42
SCAF11-210ENST00000547654 NLGN2Q8NFZ4 835 aa6.15□□□□□ -1.42
SCAF11-210ENST00000547654 SMARCC2Q8TAQ2 1214 aa6.15□□□□□ -1.42
SCAF11-210ENST00000547654 PEX11GQ96HA9 241 aa6.15□□□□□ -1.42
SCAF11-210ENST00000547654 CAPN10Q9HC96 672 aa6.15□□□□□ -1.42
SCAF11-210ENST00000547654 WHRNQ9P202 907 aa6.15□□□□□ -1.42
SCAF11-210ENST00000547654 APEX2Q9UBZ4 518 aa6.15□□□□□ -1.42
SCAF11-210ENST00000547654 INPP5FQ9Y2H2 1132 aa6.15□□□□□ -1.42
SCAF11-210ENST00000547654 DIS3Q9Y2L1 958 aaKnown RBP6.15□□□□□ -1.42
SCAF11-210ENST00000547654 TMA7Q9Y2S6 64 aaKnown RBP6.15□□□□□ -1.42
SCAF11-210ENST00000547654 SLC12A7Q9Y666 1083 aa6.15□□□□□ -1.42
SCAF11-210ENST00000547654 ARNTLO00327 626 aa6.14□□□□□ -1.43
SCAF11-210ENST00000547654 AURKAO14965 403 aa6.14□□□□□ -1.43
SCAF11-210ENST00000547654 PPP1R11O60927 126 aaPredicted RBP6.14□□□□□ -1.43
SCAF11-210ENST00000547654 ITGB3P05106 788 aa6.14□□□□□ -1.43
SCAF11-210ENST00000547654 ATP2B1P20020 1258 aa6.14□□□□□ -1.43
SCAF11-210ENST00000547654 SLC7A5Q01650 507 aa6.14□□□□□ -1.43
SCAF11-210ENST00000547654 PPP2R5DQ14738 602 aa6.14□□□□□ -1.43
SCAF11-210ENST00000547654 SLC9A5Q14940 896 aa6.14□□□□□ -1.43
SCAF11-210ENST00000547654 TCEAL1Q15170 157 aa6.14□□□□□ -1.43
SCAF11-210ENST00000547654 EEF1DP3Q658K8 133 aa6.14□□□□□ -1.43
SCAF11-210ENST00000547654 RCSD1Q6JBY9 416 aa6.14□□□□□ -1.43
SCAF11-210ENST00000547654 TTLL7Q6ZT98 887 aa6.14□□□□□ -1.43
SCAF11-210ENST00000547654 NOP9Q86U38 636 aaKnown RBP6.14□□□□□ -1.43
SCAF11-210ENST00000547654 MCF2L2Q86YR7 1114 aa6.14□□□□□ -1.43
SCAF11-210ENST00000547654 MICAL1Q8TDZ2 1067 aa6.14□□□□□ -1.43
SCAF11-210ENST00000547654 RWDD3Q9Y3V2 267 aa6.14□□□□□ -1.43
SCAF11-210ENST00000547654 TNFRSF1AP19438 455 aa6.13□□□□□ -1.43
SCAF11-210ENST00000547654 ETFBP38117 255 aa6.13□□□□□ -1.43
SCAF11-210ENST00000547654 ZXDAP98168 799 aa6.13□□□□□ -1.43
SCAF11-210ENST00000547654 GNPTABQ3T906 1256 aa6.13□□□□□ -1.43
SCAF11-210ENST00000547654 MRM1Q6IN84 353 aaKnown RBP6.13□□□□□ -1.43
SCAF11-210ENST00000547654 GIMAP6Q6P9H5 292 aa6.13□□□□□ -1.43
SCAF11-210ENST00000547654 ZNF761Q86XN6 746 aaPredicted RBP6.13□□□□□ -1.43
SCAF11-210ENST00000547654 SLC43A3Q8NBI5 491 aa6.13□□□□□ -1.43
SCAF11-210ENST00000547654 NETO2Q8NC67 525 aa6.13□□□□□ -1.43
SCAF11-210ENST00000547654 CPA5Q8WXQ8 436 aa6.13□□□□□ -1.43
SCAF11-210ENST00000547654 ZBTB8AQ96BR9 441 aa6.13□□□□□ -1.43
SCAF11-210ENST00000547654 LOXL4Q96JB6 756 aa6.13□□□□□ -1.43
SCAF11-210ENST00000547654 MRGPRX3Q96LB0 322 aa6.13□□□□□ -1.43
SCAF11-210ENST00000547654 CRBNQ96SW2 442 aa6.13□□□□□ -1.43
SCAF11-210ENST00000547654 HIRIP3Q9BW71 556 aaPredicted RBP6.13□□□□□ -1.43
SCAF11-210ENST00000547654 FBLN5Q9UBX5 448 aa6.13□□□□□ -1.43
SCAF11-210ENST00000547654 CGGBP1Q9UFW8 167 aaPredicted RBP6.13□□□□□ -1.43
SCAF11-210ENST00000547654 CADPSQ9ULU8 1353 aa6.13□□□□□ -1.43
SCAF11-210ENST00000547654 STXBP3O00186 592 aa6.12□□□□□ -1.43
SCAF11-210ENST00000547654 GTF2F1P35269 517 aaKnown RBP eCLIP6.12□□□□□ -1.43
SCAF11-210ENST00000547654 ADCY4Q8NFM4 1077 aa6.12□□□□□ -1.43
SCAF11-210ENST00000547654 COPS5Q92905 334 aa6.12□□□□□ -1.43
SCAF11-210ENST00000547654 NOX5Q96PH1 765 aa6.12□□□□□ -1.43
SCAF11-210ENST00000547654 SRRDQ9UH36 339 aa6.12□□□□□ -1.43
SCAF11-210ENST00000547654 EMC9Q9Y3B6 208 aa6.12□□□□□ -1.43
SCAF11-210ENST00000547654 SMAD7O15105 426 aaKnown RBP6.11□□□□□ -1.43
SCAF11-210ENST00000547654 AKAP8O43823 692 aaKnown RBP6.11□□□□□ -1.43
SCAF11-210ENST00000547654 CYP2C8P10632 490 aa6.11□□□□□ -1.43
SCAF11-210ENST00000547654 SEPHS1P49903 392 aa6.11□□□□□ -1.43
SCAF11-210ENST00000547654 CACNB2Q08289 660 aaPredicted RBP6.11□□□□□ -1.43
SCAF11-210ENST00000547654 GRB10Q13322 594 aa6.11□□□□□ -1.43
SCAF11-210ENST00000547654 SMAD4Q13485 552 aaKnown RBP6.11□□□□□ -1.43
SCAF11-210ENST00000547654 WWC2Q6AWC2 1192 aa6.11□□□□□ -1.43
SCAF11-210ENST00000547654 KIAA1211LQ6NV74 962 aa6.11□□□□□ -1.43
SCAF11-210ENST00000547654 ADAMTS17Q8TE56 1095 aa6.11□□□□□ -1.43
SCAF11-210ENST00000547654 USP33Q8TEY7 942 aa6.11□□□□□ -1.43
SCAF11-210ENST00000547654 ARMC5Q96C12 935 aa6.11□□□□□ -1.43
SCAF11-210ENST00000547654 FGD4Q96M96 766 aa6.11□□□□□ -1.43
SCAF11-210ENST00000547654 CHMP4AQ9BY43 222 aa6.11□□□□□ -1.43
SCAF11-210ENST00000547654 GBP3Q9H0R5 595 aa6.11□□□□□ -1.43
SCAF11-210ENST00000547654 MATN3O15232 486 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms