RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 P2RX5Q93086 422 aa13.94□□□□□ -0.18
PTCH1-212ENST00000546744 ATP6V1G3Q96LB4 118 aa13.94□□□□□ -0.18
PTCH1-212ENST00000546744 COPRSQ9NQ92 184 aa13.94□□□□□ -0.18
PTCH1-212ENST00000546744 IPO5O00410 1097 aaKnown RBP13.94□□□□□ -0.18
PTCH1-212ENST00000546744 EIF3HO15372 352 aaKnown RBP eCLIP13.94□□□□□ -0.18
PTCH1-212ENST00000546744 DDAH1O94760 285 aa13.94□□□□□ -0.18
PTCH1-212ENST00000546744 IFNAR2P48551 515 aa13.94□□□□□ -0.18
PTCH1-212ENST00000546744 TBC1D1Q86TI0 1168 aaPredicted RBP13.94□□□□□ -0.18
PTCH1-212ENST00000546744 FANCBQ8NB91 859 aa13.94□□□□□ -0.18
PTCH1-212ENST00000546744 SERPINI1Q99574 410 aa13.94□□□□□ -0.18
PTCH1-212ENST00000546744 ANKRD2Q9GZV1 360 aa13.94□□□□□ -0.18
PTCH1-212ENST00000546744 TMEM60Q9H2L4 133 aa13.94□□□□□ -0.18
PTCH1-212ENST00000546744 SOWAHDA6NJG2 315 aa13.94□□□□□ -0.18
PTCH1-212ENST00000546744 RNMTO43148 476 aaKnown RBP13.94□□□□□ -0.18
PTCH1-212ENST00000546744 CCNT1O60563 726 aaKnown RBP13.94□□□□□ -0.18
PTCH1-212ENST00000546744 CCNE1P24864 410 aa13.94□□□□□ -0.18
PTCH1-212ENST00000546744 GGCXP38435 758 aa13.94□□□□□ -0.18
PTCH1-212ENST00000546744 ZMYND12Q9H0C1 365 aa13.94□□□□□ -0.18
PTCH1-212ENST00000546744 NOC2LQ9Y3T9 749 aaKnown RBP13.94□□□□□ -0.18
PTCH1-212ENST00000546744 SRPRBQ9Y5M8 271 aaKnown RBP13.94□□□□□ -0.18
PTCH1-212ENST00000546744 ADGRG1Q9Y653 693 aa13.94□□□□□ -0.18
PTCH1-212ENST00000546744 SERPING1P05155 500 aa13.94□□□□□ -0.18
PTCH1-212ENST00000546744 NECTIN1Q15223 517 aa13.94□□□□□ -0.18
PTCH1-212ENST00000546744 XAGE2Q96GT9 111 aa13.94□□□□□ -0.18
PTCH1-212ENST00000546744 PLIN2Q99541 437 aa13.94□□□□□ -0.18
PTCH1-212ENST00000546744 EDEM3Q9BZQ6 932 aa13.94□□□□□ -0.18
PTCH1-212ENST00000546744 USP31Q70CQ4 1352 aa13.94□□□□□ -0.18
PTCH1-212ENST00000546744 GIPC1O14908 333 aa13.93□□□□□ -0.18
PTCH1-212ENST00000546744 FOXP2O15409 715 aa13.93□□□□□ -0.18
PTCH1-212ENST00000546744 SERPINB6P35237 376 aa13.93□□□□□ -0.18
PTCH1-212ENST00000546744 FKBP3Q00688 224 aaKnown RBP13.93□□□□□ -0.18
PTCH1-212ENST00000546744 CAV1Q03135 178 aa13.93□□□□□ -0.18
PTCH1-212ENST00000546744 REXO1Q8N1G1 1221 aaKnown RBP13.93□□□□□ -0.18
PTCH1-212ENST00000546744 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.93□□□□□ -0.18
PTCH1-212ENST00000546744 CARD10Q9BWT7 1032 aa13.93□□□□□ -0.18
PTCH1-212ENST00000546744 EPN3Q9H201 632 aa13.93□□□□□ -0.18
PTCH1-212ENST00000546744 PFDN4Q9NQP4 134 aa13.93□□□□□ -0.18
PTCH1-212ENST00000546744 STK17AQ9UEE5 414 aa13.93□□□□□ -0.18
PTCH1-212ENST00000546744 PRPF6O94906 941 aaKnown RBP13.93□□□□□ -0.18
PTCH1-212ENST00000546744 MYO1EQ12965 1108 aa13.93□□□□□ -0.18
PTCH1-212ENST00000546744 TTC19Q6DKK2 380 aaPredicted RBP13.93□□□□□ -0.18
PTCH1-212ENST00000546744 BLIDQ8IZY5 108 aa13.93□□□□□ -0.18
PTCH1-212ENST00000546744 BLZF1Q9H2G9 400 aa13.93□□□□□ -0.18
PTCH1-212ENST00000546744 ATP8A1Q9Y2Q0 1164 aa13.93□□□□□ -0.18
PTCH1-212ENST00000546744 OVOS2A0A0J9YW53 1432 aa13.93□□□□□ -0.18
PTCH1-212ENST00000546744 OVOS2Q6IE36 1432 aa13.93□□□□□ -0.18
PTCH1-212ENST00000546744 B4DLN1 442 aa13.93□□□□□ -0.18
PTCH1-212ENST00000546744 STXBP3O00186 592 aa13.93□□□□□ -0.18
PTCH1-212ENST00000546744 BUB1O43683 1085 aa13.93□□□□□ -0.18
PTCH1-212ENST00000546744 TXKP42681 527 aa13.93□□□□□ -0.18
PTCH1-212ENST00000546744 CHMP6Q96FZ7 201 aa13.93□□□□□ -0.18
PTCH1-212ENST00000546744 SUCLG2Q96I99 432 aa13.93□□□□□ -0.18
PTCH1-212ENST00000546744 KCNJ14Q9UNX9 436 aa13.93□□□□□ -0.18
PTCH1-212ENST00000546744 SH3TC1Q8TE82 1336 aa13.93□□□□□ -0.18
PTCH1-212ENST00000546744 OR52Z1P0C646 297 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 KRT5P13647 590 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 ADCY7P51828 1080 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 TIMM10P62072 90 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 YWHAEP62258 255 aaKnown RBP13.92□□□□□ -0.18
PTCH1-212ENST00000546744 PHEXP78562 749 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 PSMD2Q13200 908 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.92□□□□□ -0.18
PTCH1-212ENST00000546744 PRR16Q569H4 304 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 ACRBPQ8NEB7 543 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 LPIN2Q92539 896 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 NHEJ1Q9H9Q4 299 aaPredicted RBP13.92□□□□□ -0.18
PTCH1-212ENST00000546744 EXOC3O60645 756 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 MMEP08473 750 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 RASSF7Q02833 373 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 ZNF827Q17R98 1081 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 ADCK5Q3MIX3 580 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 FAM133BQ5BKY9 247 aaKnown RBP13.92□□□□□ -0.18
PTCH1-212ENST00000546744 FAM26FQ5R3K3 315 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 DCUN1D2Q6PH85 259 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 LRIG3Q6UXM1 1119 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 EAF2Q96CJ1 260 aaPredicted RBP13.92□□□□□ -0.18
PTCH1-212ENST00000546744 CCDC97Q96F63 343 aaPredicted RBP13.92□□□□□ -0.18
PTCH1-212ENST00000546744 YIPF3Q9GZM5 350 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 SLC24A3Q9HC58 644 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 PCDHB13Q9Y5F0 798 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 NCOA3Q9Y6Q9 1424 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 ECEL1O95672 775 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 BPIFB4P59827 614 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 C2orf54Q08AI8 447 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 AOC3Q16853 763 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 ARL6IP4Q66PJ3 421 aaKnown RBP13.92□□□□□ -0.18
PTCH1-212ENST00000546744 DONSONQ9NYP3 566 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 PAIP2BQ9ULR5 123 aaKnown RBP13.92□□□□□ -0.18
PTCH1-212ENST00000546744 IGSF1Q8N6C5 1336 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 WDR19Q8NEZ3 1342 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 MIF4GDA9UHW6 222 aaKnown RBP13.92□□□□□ -0.18
PTCH1-212ENST00000546744 ESRRAP11474 423 aaPredicted RBP13.92□□□□□ -0.18
PTCH1-212ENST00000546744 POLR2FP61218 127 aaKnown RBP13.92□□□□□ -0.18
PTCH1-212ENST00000546744 LRRC63Q05C16 580 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 NYAP1Q6ZVC0 841 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 PODNQ7Z5L7 613 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 SYMPKQ92797 1274 aaKnown RBP13.92□□□□□ -0.18
PTCH1-212ENST00000546744 NBPF3Q9H094 633 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 RAB20Q9NX57 234 aa13.92□□□□□ -0.18
PTCH1-212ENST00000546744 MID2Q9UJV3 735 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms