RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 MEA1Q16626 185 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 TCP11X2Q5H9J9 407 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 IFIT1BQ5T764 474 aaKnown RBP7.25□□□□□ -1.25
SNHG1-225ENST00000545920 PAPD7Q5XG87 772 aaKnown RBP7.25□□□□□ -1.25
SNHG1-225ENST00000545920 WWC2Q6AWC2 1192 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 ISM2Q6H9L7 571 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 RAD9BQ6WBX8 426 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 TMTC3Q6ZXV5 915 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 TAS1R3Q7RTX0 852 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 ZNF572Q7Z3I7 529 aaPredicted RBP7.25□□□□□ -1.25
SNHG1-225ENST00000545920 ZBTB33Q86T24 672 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 DAGLBQ8NCG7 672 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 LRRN4CLQ8ND94 238 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 TNFRSF25Q93038 417 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 DHTKD1Q96HY7 919 aaPredicted RBP7.25□□□□□ -1.25
SNHG1-225ENST00000545920 AK8Q96MA6 479 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 DNAJC7Q99615 494 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 LZTS2Q9BRK4 669 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 EDEM3Q9BZQ6 932 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 MRPL44Q9H9J2 332 aaKnown RBP7.25□□□□□ -1.25
SNHG1-225ENST00000545920 EFCC1Q9HA90 598 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 CABP5Q9NP86 173 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 SAMSN1Q9NSI8 373 aaKnown RBP7.25□□□□□ -1.25
SNHG1-225ENST00000545920 GJB4Q9NTQ9 266 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 MYO6Q9UM54 1294 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 BCL9O00512 1426 aa7.25□□□□□ -1.25
SNHG1-225ENST00000545920 MAGEB6P1A0A0J9YX57 407 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 A0A0U1RQG5 324 aaPredicted RBP7.24□□□□□ -1.25
SNHG1-225ENST00000545920 UNCXA6NJT0 531 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 LGALS16A8MUM7 142 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 PSMA7O14818 248 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 SLC26A4O43511 780 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 FGFR1OPO95684 399 aaKnown RBP7.24□□□□□ -1.25
SNHG1-225ENST00000545920 CASP14P31944 242 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 INSM1Q01101 510 aaPredicted RBP7.24□□□□□ -1.25
SNHG1-225ENST00000545920 AMPD2Q01433 879 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 KRT31Q15323 416 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 PKN1Q16512 942 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 OCLNQ16625 522 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 SBK1Q52WX2 424 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 ZNF569Q5MCW4 686 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 GBP6Q6ZN66 633 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 TRAPPC11Q7Z392 1133 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 DZIP3Q86Y13 1208 aaKnown RBP7.24□□□□□ -1.25
SNHG1-225ENST00000545920 CCDC125Q86Z20 511 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 DNAJC10Q8IXB1 793 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 ANKS1AQ92625 1134 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 MED15Q96RN5 788 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 CCSER1Q9C0I3 900 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 RASSF4Q9H2L5 321 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 ANKZF1Q9H8Y5 726 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 ARMT1Q9H993 441 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 IGSF5Q9NSI5 407 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 ATP8A2Q9NTI2 1148 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 LRP2BPQ9P2M1 347 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 MAGEC2Q9UBF1 373 aaPredicted RBP7.24□□□□□ -1.25
SNHG1-225ENST00000545920 RNF14Q9UBS8 474 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 DENND2AQ9ULE3 1009 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 CAPN11Q9UMQ6 739 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 DOLKQ9UPQ8 538 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 KIAA1024Q9UPX6 916 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 LUC7L2Q9Y383 392 aaKnown RBP7.24□□□□□ -1.25
SNHG1-225ENST00000545920 EPN1Q9Y6I3 576 aaPredicted RBP7.24□□□□□ -1.25
SNHG1-225ENST00000545920 RREB1Q92766 1687 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 TNKSO95271 1327 aa7.24□□□□□ -1.25
SNHG1-225ENST00000545920 ANKRD36CQ5JPF3 1778 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 PLCH1Q4KWH8 1693 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 EIF3CLB5ME19 914 aaKnown RBP7.23□□□□□ -1.25
SNHG1-225ENST00000545920 KCNJ18B7U540 433 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 POLR3GO15318 223 aaPredicted RBP7.23□□□□□ -1.25
SNHG1-225ENST00000545920 FOXN1O15353 648 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 PPFIA3O75145 1194 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 RHOBTB3O94955 611 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 SEC31AO94979 1220 aaKnown RBP7.23□□□□□ -1.25
SNHG1-225ENST00000545920 NDUFA10O95299 355 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 RPN1P04843 607 aaKnown RBP7.23□□□□□ -1.25
SNHG1-225ENST00000545920 SCG2P13521 617 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 GUCY1A2P33402 732 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 KRT9P35527 623 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 ARHGAP25P42331 645 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 SERPINB4P48594 390 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 USP14P54578 494 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 SEC13P55735 322 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 ZBED6P86452 979 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 AMPD3Q01432 767 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 APBA1Q02410 837 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 RAD51AP2Q09MP3 1159 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 TROAPQ12815 778 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 NR5A1Q13285 461 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 KCNJ12Q14500 433 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 CASP8Q14790 479 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 KARSQ15046 597 aaKnown RBP7.23□□□□□ -1.25
SNHG1-225ENST00000545920 PFKFB3Q16875 520 aaPredicted RBP7.23□□□□□ -1.25
SNHG1-225ENST00000545920 RRAGBQ5VZM2 374 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 PI16Q6UXB8 463 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 SPATS2Q86XZ4 545 aaKnown RBP7.23□□□□□ -1.25
SNHG1-225ENST00000545920 RAB11FIP4Q86YS3 637 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 AMOTL1Q8IY63 956 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 ADSSL1Q8N142 457 aa7.23□□□□□ -1.25
SNHG1-225ENST00000545920 SLC35F6Q8N357 371 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms