RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 TMEM67Q5HYA8 995 aa23.11■■□□□ 1.29
CHD4-213ENST00000545584 ARHGEF16Q5VV41 709 aa23.11■■□□□ 1.29
CHD4-213ENST00000545584 CATIPQ7Z7H3 387 aa23.11■■□□□ 1.29
CHD4-213ENST00000545584 MTG1Q9BT17 334 aaPredicted RBP23.11■■□□□ 1.29
CHD4-213ENST00000545584 GRIN2DO15399 1336 aa23.1■■□□□ 1.29
CHD4-213ENST00000545584 CHST3Q7LGC8 479 aa23.1■■□□□ 1.29
CHD4-213ENST00000545584 HOMER1Q86YM7 354 aa23.1■■□□□ 1.29
CHD4-213ENST00000545584 MTMR8Q96EF0 704 aa23.1■■□□□ 1.29
CHD4-213ENST00000545584 FAM161BQ96MY7 647 aa23.1■■□□□ 1.29
CHD4-213ENST00000545584 HIPK3Q9H422 1215 aa23.1■■□□□ 1.29
CHD4-213ENST00000545584 MAP3K20Q9NYL2 800 aaKnown RBP23.1■■□□□ 1.29
CHD4-213ENST00000545584 COL20A1Q9P218 1284 aa23.1■■□□□ 1.29
CHD4-213ENST00000545584 PCDHA1Q9Y5I3 950 aa23.1■■□□□ 1.29
CHD4-213ENST00000545584 CSF2RAP15509 400 aa23.09■■□□□ 1.29
CHD4-213ENST00000545584 CYP2C18P33260 490 aa23.09■■□□□ 1.29
CHD4-213ENST00000545584 PURAQ00577 322 aaKnown RBP23.09■■□□□ 1.29
CHD4-213ENST00000545584 SEPT14Q6ZU15 432 aa23.09■■□□□ 1.29
CHD4-213ENST00000545584 STOX1Q6ZVD7 989 aa23.09■■□□□ 1.29
CHD4-213ENST00000545584 COPS5Q92905 334 aa23.09■■□□□ 1.29
CHD4-213ENST00000545584 TRPV6Q9H1D0 765 aa23.09■■□□□ 1.29
CHD4-213ENST00000545584 TAF6LQ9Y6J9 622 aa23.09■■□□□ 1.29
CHD4-213ENST00000545584 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.08■■□□□ 1.29
CHD4-213ENST00000545584 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.08■■□□□ 1.29
CHD4-213ENST00000545584 B4GALT4O60513 344 aa23.08■■□□□ 1.29
CHD4-213ENST00000545584 SUPT20HL2P0C7V6 817 aa23.08■■□□□ 1.29
CHD4-213ENST00000545584 EIF2AK2P19525 551 aaKnown RBP23.08■■□□□ 1.29
CHD4-213ENST00000545584 PSRC1Q6PGN9 363 aaPredicted RBP23.08■■□□□ 1.29
CHD4-213ENST00000545584 CASC1Q6TDU7 716 aa23.08■■□□□ 1.29
CHD4-213ENST00000545584 MB21D2Q8IYB1 491 aaPredicted RBP23.08■■□□□ 1.29
CHD4-213ENST00000545584 SAMD3Q8N6K7 520 aa23.08■■□□□ 1.29
CHD4-213ENST00000545584 SLC17A8Q8NDX2 589 aa23.08■■□□□ 1.29
CHD4-213ENST00000545584 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.08■■□□□ 1.292e-9■□□□□ 8.2
CHD4-213ENST00000545584 ALDH8A1Q9H2A2 487 aaPredicted RBP23.08■■□□□ 1.29
CHD4-213ENST00000545584 RIOX1Q9H6W3 641 aa23.08■■□□□ 1.29
CHD4-213ENST00000545584 A6NJR5 290 aa23.07■■□□□ 1.28
CHD4-213ENST00000545584 HSD17B4P51659 736 aa23.07■■□□□ 1.28
CHD4-213ENST00000545584 TROAPQ12815 778 aa23.07■■□□□ 1.28
CHD4-213ENST00000545584 PIGSQ96S52 555 aa23.07■■□□□ 1.28
CHD4-213ENST00000545584 SENP2Q9HC62 589 aa23.07■■□□□ 1.28
CHD4-213ENST00000545584 PXMP2Q9NR77 195 aa23.07■■□□□ 1.28
CHD4-213ENST00000545584 PPP1R11O60927 126 aaPredicted RBP23.06■■□□□ 1.28
CHD4-213ENST00000545584 EIF3JO75822 258 aaKnown RBP23.06■■□□□ 1.28
CHD4-213ENST00000545584 ARIH2O95376 493 aa23.06■■□□□ 1.28
CHD4-213ENST00000545584 GH1P01241 217 aa23.06■■□□□ 1.28
CHD4-213ENST00000545584 NR3C2P08235 984 aa23.06■■□□□ 1.28
CHD4-213ENST00000545584 FAM47CQ5HY64 1035 aa23.06■■□□□ 1.28
CHD4-213ENST00000545584 TMEM240Q5SV17 173 aa23.06■■□□□ 1.28
CHD4-213ENST00000545584 CCDC62Q6P9F0 684 aa23.06■■□□□ 1.28
CHD4-213ENST00000545584 CENPQQ7L2Z9 268 aaPredicted RBP23.06■■□□□ 1.28
CHD4-213ENST00000545584 IGDCC4Q8TDY8 1250 aa23.06■■□□□ 1.28
CHD4-213ENST00000545584 ESYT1Q9BSJ8 1104 aa23.06■■□□□ 1.28
CHD4-213ENST00000545584 MTA3Q9BTC8 594 aa23.06■■□□□ 1.28
CHD4-213ENST00000545584 IL23AQ9NPF7 189 aa23.06■■□□□ 1.28
CHD4-213ENST00000545584 ACRP10323 421 aa23.05■■□□□ 1.28
CHD4-213ENST00000545584 ANTXR2P58335 489 aa23.05■■□□□ 1.28
CHD4-213ENST00000545584 GHRHRQ02643 423 aa23.05■■□□□ 1.28
CHD4-213ENST00000545584 CTCFLQ8NI51 663 aaPredicted RBP23.05■■□□□ 1.28
CHD4-213ENST00000545584 GUCD1Q96NT3 240 aa23.05■■□□□ 1.28
CHD4-213ENST00000545584 NOC4LQ9BVI4 516 aaKnown RBP23.05■■□□□ 1.28
CHD4-213ENST00000545584 LSG1Q9H089 658 aaKnown RBP23.05■■□□□ 1.28
CHD4-213ENST00000545584 MTIF3Q9H2K0 278 aaKnown RBP23.05■■□□□ 1.28
CHD4-213ENST00000545584 SEMA6BQ9H3T3 888 aa23.05■■□□□ 1.28
CHD4-213ENST00000545584 TMEM265A0A087WTH1 108 aa23.04■■□□□ 1.28
CHD4-213ENST00000545584 PNMA6FA0A0J9YX94 578 aa23.04■■□□□ 1.28
CHD4-213ENST00000545584 GCOM1H8Y6P7 765 aaPredicted RBP23.04■■□□□ 1.28
CHD4-213ENST00000545584 OPLAHO14841 1288 aa23.04■■□□□ 1.28
CHD4-213ENST00000545584 POLR2MP0CAP2 368 aa23.04■■□□□ 1.28
CHD4-213ENST00000545584 KIF5BP33176 963 aa23.04■■□□□ 1.28
CHD4-213ENST00000545584 MCM5P33992 734 aa23.04■■□□□ 1.28
CHD4-213ENST00000545584 CCL23P55773 120 aa23.04■■□□□ 1.28
CHD4-213ENST00000545584 LY6KQ17RY6 165 aa23.04■■□□□ 1.28
CHD4-213ENST00000545584 NBPF20Q3BBV1 942 aa23.04■■□□□ 1.28
CHD4-213ENST00000545584 NFRKBQ6P4R8 1299 aa23.04■■□□□ 1.28
CHD4-213ENST00000545584 ZNF365Q70YC5 407 aa23.04■■□□□ 1.28
CHD4-213ENST00000545584 C16orf59Q7L2K0 433 aa23.04■■□□□ 1.28
CHD4-213ENST00000545584 TMTC2Q8N394 836 aa23.04■■□□□ 1.28
CHD4-213ENST00000545584 ANO2Q9NQ90 1003 aa23.04■■□□□ 1.28
CHD4-213ENST00000545584 TRMT13Q9NUP7 481 aaKnown RBP23.04■■□□□ 1.28
CHD4-213ENST00000545584 MRVI1Q9Y6F6 885 aa23.04■■□□□ 1.28
CHD4-213ENST00000545584 PRC1O43663 620 aa23.03■■□□□ 1.28
CHD4-213ENST00000545584 CYTH3O43739 400 aa23.03■■□□□ 1.28
CHD4-213ENST00000545584 DDAH1O94760 285 aa23.03■■□□□ 1.28
CHD4-213ENST00000545584 MYCLP12524 364 aaPredicted RBP23.03■■□□□ 1.28
CHD4-213ENST00000545584 PTPN11Q06124 597 aaPredicted RBP23.03■■□□□ 1.28
CHD4-213ENST00000545584 BMP2KLQ5H9B9 411 aa23.03■■□□□ 1.28
CHD4-213ENST00000545584 NFXL1Q6ZNB6 911 aa23.03■■□□□ 1.28
CHD4-213ENST00000545584 RPUSD2Q8IZ73 545 aaKnown RBP23.03■■□□□ 1.28
CHD4-213ENST00000545584 ZNF654Q8IZM8 581 aa23.03■■□□□ 1.28
CHD4-213ENST00000545584 AFG1LQ8WV93 481 aa23.03■■□□□ 1.28
CHD4-213ENST00000545584 TMEM87BQ96K49 555 aa23.03■■□□□ 1.28
CHD4-213ENST00000545584 MAP3K14Q99558 947 aa23.03■■□□□ 1.28
CHD4-213ENST00000545584 PDCD2LQ9BRP1 358 aa23.03■■□□□ 1.28
CHD4-213ENST00000545584 UMODL1Q5DID0 1318 aa23.03■■□□□ 1.28
CHD4-213ENST00000545584 BAZ2BQ9UIF8 2168 aaKnown RBP23.02■■□□□ 1.28
CHD4-213ENST00000545584 SLC27A2O14975 620 aa23.02■■□□□ 1.28
CHD4-213ENST00000545584 FGBP02675 491 aa23.02■■□□□ 1.28
CHD4-213ENST00000545584 MMP3P08254 477 aa23.02■■□□□ 1.28
CHD4-213ENST00000545584 CASTP20810 708 aaKnown RBP23.02■■□□□ 1.28
CHD4-213ENST00000545584 HOXA13P31271 388 aaPredicted RBP23.02■■□□□ 1.28
CHD4-213ENST00000545584 CHMP4BP1P59074 171 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms