RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 NKRFO15226 690 aaKnown RBP eCLIP24.59■■□□□ 1.535e-7■□□□□ 9.1
SCARB1-210ENST00000545493 B4GALT4O60513 344 aa24.59■■□□□ 1.53
SCARB1-210ENST00000545493 GHRHRQ02643 423 aa24.59■■□□□ 1.53
SCARB1-210ENST00000545493 ZNF697Q5TEC3 545 aa24.59■■□□□ 1.53
SCARB1-210ENST00000545493 MCF2L2Q86YR7 1114 aa24.59■■□□□ 1.53
SCARB1-210ENST00000545493 FAM161BQ96MY7 647 aa24.59■■□□□ 1.53
SCARB1-210ENST00000545493 AMNQ9BXJ7 453 aa24.59■■□□□ 1.53
SCARB1-210ENST00000545493 POLR3EQ9NVU0 708 aa24.59■■□□□ 1.53
SCARB1-210ENST00000545493 ZBTB5O15062 677 aa24.58■■□□□ 1.53
SCARB1-210ENST00000545493 CSF2RAP15509 400 aa24.58■■□□□ 1.53
SCARB1-210ENST00000545493 CYP2C18P33260 490 aa24.58■■□□□ 1.53
SCARB1-210ENST00000545493 TROAPQ12815 778 aa24.58■■□□□ 1.53
SCARB1-210ENST00000545493 PPIGQ13427 754 aaKnown RBP eCLIP24.58■■□□□ 1.531e-19■□□□□ 8.1
SCARB1-210ENST00000545493 WTAPQ15007 396 aa24.58■■□□□ 1.53
SCARB1-210ENST00000545493 C16orf59Q7L2K0 433 aa24.58■■□□□ 1.53
SCARB1-210ENST00000545493 SEZ6LQ9BYH1 1024 aa24.58■■□□□ 1.53
SCARB1-210ENST00000545493 LSG1Q9H089 658 aaKnown RBP24.58■■□□□ 1.53
SCARB1-210ENST00000545493 TRPV6Q9H1D0 765 aa24.58■■□□□ 1.53
SCARB1-210ENST00000545493 TANC1Q9C0D5 1861 aa24.58■■□□□ 1.52
SCARB1-210ENST00000545493 B4DLN1 442 aa24.57■■□□□ 1.52
SCARB1-210ENST00000545493 CYTH3O43739 400 aa24.57■■□□□ 1.52
SCARB1-210ENST00000545493 MYL3P08590 195 aa24.57■■□□□ 1.52
SCARB1-210ENST00000545493 TXNP10599 105 aaKnown RBP24.57■■□□□ 1.52
SCARB1-210ENST00000545493 HSD17B4P51659 736 aa24.57■■□□□ 1.52
SCARB1-210ENST00000545493 MRPL12P52815 198 aaKnown RBP24.57■■□□□ 1.52
SCARB1-210ENST00000545493 TTLL4Q14679 1199 aa24.57■■□□□ 1.52
SCARB1-210ENST00000545493 HOMER1Q86YM7 354 aa24.57■■□□□ 1.52
SCARB1-210ENST00000545493 NSUN6Q8TEA1 469 aaKnown RBP24.57■■□□□ 1.52
SCARB1-210ENST00000545493 RMDN3Q96TC7 470 aa24.57■■□□□ 1.52
SCARB1-210ENST00000545493 NOC4LQ9BVI4 516 aaKnown RBP24.57■■□□□ 1.52
SCARB1-210ENST00000545493 ALDH8A1Q9H2A2 487 aaPredicted RBP24.57■■□□□ 1.52
SCARB1-210ENST00000545493 HIPK3Q9H422 1215 aa24.57■■□□□ 1.52
SCARB1-210ENST00000545493 ERICH2A1L162 156 aa24.56■■□□□ 1.52
SCARB1-210ENST00000545493 A6NJR5 290 aa24.56■■□□□ 1.52
SCARB1-210ENST00000545493 CFBP00751 764 aa24.56■■□□□ 1.52
SCARB1-210ENST00000545493 EIF2AK2P19525 551 aaKnown RBP24.56■■□□□ 1.52
SCARB1-210ENST00000545493 COL9A3Q14050 684 aaPredicted RBP24.56■■□□□ 1.52
SCARB1-210ENST00000545493 TMEM240Q5SV17 173 aa24.56■■□□□ 1.52
SCARB1-210ENST00000545493 CCDC62Q6P9F0 684 aa24.56■■□□□ 1.52
SCARB1-210ENST00000545493 TMEM199Q8N511 208 aa24.56■■□□□ 1.52
SCARB1-210ENST00000545493 PIGSQ96S52 555 aa24.56■■□□□ 1.52
SCARB1-210ENST00000545493 TTYH1Q9H313 450 aaPredicted RBP24.56■■□□□ 1.52
SCARB1-210ENST00000545493 RIOX1Q9H6W3 641 aa24.56■■□□□ 1.52
SCARB1-210ENST00000545493 PXMP2Q9NR77 195 aa24.56■■□□□ 1.52
SCARB1-210ENST00000545493 BAZ2BQ9UIF8 2168 aaKnown RBP24.55■■□□□ 1.52
SCARB1-210ENST00000545493 ACRP10323 421 aa24.55■■□□□ 1.52
SCARB1-210ENST00000545493 SART3Q15020 963 aaKnown RBP24.55■■□□□ 1.52
SCARB1-210ENST00000545493 TMEM67Q5HYA8 995 aa24.55■■□□□ 1.52
SCARB1-210ENST00000545493 IGDCC4Q8TDY8 1250 aa24.55■■□□□ 1.52
SCARB1-210ENST00000545493 ESYT1Q9BSJ8 1104 aa24.55■■□□□ 1.52
SCARB1-210ENST00000545493 MTG1Q9BT17 334 aaPredicted RBP24.55■■□□□ 1.52
SCARB1-210ENST00000545493 WNT8AQ9H1J5 351 aa24.55■■□□□ 1.52
SCARB1-210ENST00000545493 TRMT13Q9NUP7 481 aaKnown RBP24.55■■□□□ 1.52
SCARB1-210ENST00000545493 ARHGAP1Q07960 439 aa24.54■■□□□ 1.52
SCARB1-210ENST00000545493 RASIP1Q5U651 963 aa24.54■■□□□ 1.52
SCARB1-210ENST00000545493 ARHGEF16Q5VV41 709 aa24.54■■□□□ 1.52
SCARB1-210ENST00000545493 PSRC1Q6PGN9 363 aaPredicted RBP24.54■■□□□ 1.52
SCARB1-210ENST00000545493 SEPT14Q6ZU15 432 aa24.54■■□□□ 1.52
SCARB1-210ENST00000545493 PPP1R13LQ8WUF5 828 aa24.54■■□□□ 1.52
SCARB1-210ENST00000545493 IWS1Q96ST2 819 aa24.54■■□□□ 1.52
SCARB1-210ENST00000545493 LY9Q9HBG7 655 aa24.54■■□□□ 1.52
SCARB1-210ENST00000545493 GPHNQ9NQX3 736 aaPredicted RBP24.54■■□□□ 1.52
SCARB1-210ENST00000545493 PCDHA1Q9Y5I3 950 aa24.54■■□□□ 1.52
SCARB1-210ENST00000545493 A0A0C4DFX4 3053 aa24.54■■□□□ 1.52
SCARB1-210ENST00000545493 STXBP2Q15833 593 aa24.53■■□□□ 1.52
SCARB1-210ENST00000545493 LY6KQ17RY6 165 aa24.53■■□□□ 1.52
SCARB1-210ENST00000545493 IL23AQ9NPF7 189 aa24.53■■□□□ 1.52
SCARB1-210ENST00000545493 PRUNE2Q8WUY3 3088 aa24.53■■□□□ 1.52
SCARB1-210ENST00000545493 CHD9Q3L8U1 2897 aa24.53■■□□□ 1.52
SCARB1-210ENST00000545493 MMP3P08254 477 aa24.52■■□□□ 1.52
SCARB1-210ENST00000545493 BRDTQ58F21 947 aaPredicted RBP24.52■■□□□ 1.52
SCARB1-210ENST00000545493 CATIPQ7Z7H3 387 aa24.52■■□□□ 1.52
SCARB1-210ENST00000545493 IL31RAQ8NI17 732 aa24.52■■□□□ 1.52
SCARB1-210ENST00000545493 PDCD2LQ9BRP1 358 aa24.52■■□□□ 1.52
SCARB1-210ENST00000545493 MYL10Q9BUA6 226 aa24.52■■□□□ 1.52
SCARB1-210ENST00000545493 SLC27A2O14975 620 aa24.51■■□□□ 1.51
SCARB1-210ENST00000545493 NR3C2P08235 984 aa24.51■■□□□ 1.51
SCARB1-210ENST00000545493 HOXA13P31271 388 aaPredicted RBP24.51■■□□□ 1.51
SCARB1-210ENST00000545493 CCL23P55773 120 aa24.51■■□□□ 1.51
SCARB1-210ENST00000545493 NBPF20Q3BBV1 942 aa24.51■■□□□ 1.51
SCARB1-210ENST00000545493 ZNF365Q70YC5 407 aa24.51■■□□□ 1.51
SCARB1-210ENST00000545493 CENPQQ7L2Z9 268 aaPredicted RBP24.51■■□□□ 1.51
SCARB1-210ENST00000545493 ZNF654Q8IZM8 581 aa24.51■■□□□ 1.51
SCARB1-210ENST00000545493 AFG1LQ8WV93 481 aa24.51■■□□□ 1.51
SCARB1-210ENST00000545493 SEMA6BQ9H3T3 888 aa24.51■■□□□ 1.51
SCARB1-210ENST00000545493 GBF1Q92538 1859 aa24.51■■□□□ 1.51
SCARB1-210ENST00000545493 VCANP13611 3396 aa24.51■■□□□ 1.51
SCARB1-210ENST00000545493 SCN5AQ14524 2016 aa24.51■■□□□ 1.51
SCARB1-210ENST00000545493 SPTBN5Q9NRC6 3674 aaKnown RBP24.5■■□□□ 1.51
SCARB1-210ENST00000545493 TMEM265A0A087WTH1 108 aa24.5■■□□□ 1.51
SCARB1-210ENST00000545493 SH2B2O14492 632 aaPredicted RBP24.5■■□□□ 1.51
SCARB1-210ENST00000545493 PRC1O43663 620 aa24.5■■□□□ 1.51
SCARB1-210ENST00000545493 RGS20O76081 388 aa24.5■■□□□ 1.51
SCARB1-210ENST00000545493 DDAH1O94760 285 aa24.5■■□□□ 1.51
SCARB1-210ENST00000545493 GH1P01241 217 aa24.5■■□□□ 1.51
SCARB1-210ENST00000545493 CYP2C9P11712 490 aa24.5■■□□□ 1.51
SCARB1-210ENST00000545493 BMP2KLQ5H9B9 411 aa24.5■■□□□ 1.51
SCARB1-210ENST00000545493 VWCEQ96DN2 955 aa24.5■■□□□ 1.51
SCARB1-210ENST00000545493 DDX41Q9UJV9 622 aaKnown RBP24.5■■□□□ 1.51
SCARB1-210ENST00000545493 EIF3JO75822 258 aaKnown RBP24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms