RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 ITGA7Q13683 1181 aa14.52□□□□□ -0.09
ACTN1-206ENST00000544964 IQSEC1Q6DN90 963 aa14.52□□□□□ -0.09
ACTN1-206ENST00000544964 ENAHQ8N8S7 591 aaPredicted RBP14.52□□□□□ -0.09
ACTN1-206ENST00000544964 LRRC2Q9BYS8 371 aa14.52□□□□□ -0.09
ACTN1-206ENST00000544964 UPF2Q9HAU5 1272 aaKnown RBP14.52□□□□□ -0.09
ACTN1-206ENST00000544964 GPHNQ9NQX3 736 aaPredicted RBP14.52□□□□□ -0.09
ACTN1-206ENST00000544964 Q9Y3F1 56 aa14.52□□□□□ -0.09
ACTN1-206ENST00000544964 SCN5AQ14524 2016 aa14.52□□□□□ -0.09
ACTN1-206ENST00000544964 NCOR1O75376 2440 aa14.52□□□□□ -0.09
ACTN1-206ENST00000544964 KIAA1217Q5T5P2 1943 aa14.51□□□□□ -0.09
ACTN1-206ENST00000544964 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.51□□□□□ -0.09
ACTN1-206ENST00000544964 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.51□□□□□ -0.09
ACTN1-206ENST00000544964 TLR3O15455 904 aaKnown RBP14.51□□□□□ -0.09
ACTN1-206ENST00000544964 ACRP10323 421 aa14.51□□□□□ -0.09
ACTN1-206ENST00000544964 FOSL2P15408 326 aa14.51□□□□□ -0.09
ACTN1-206ENST00000544964 EDNRBP24530 442 aa14.51□□□□□ -0.09
ACTN1-206ENST00000544964 PSMA5P28066 241 aa14.51□□□□□ -0.09
ACTN1-206ENST00000544964 ANAPC15P60006 121 aa14.51□□□□□ -0.09
ACTN1-206ENST00000544964 PSMC6P62333 389 aa14.51□□□□□ -0.09
ACTN1-206ENST00000544964 EXOSC10Q01780 885 aaKnown RBP14.51□□□□□ -0.09
ACTN1-206ENST00000544964 GRIN2CQ14957 1233 aa14.51□□□□□ -0.09
ACTN1-206ENST00000544964 SEC23AQ15436 765 aa14.51□□□□□ -0.09
ACTN1-206ENST00000544964 DUSP28Q4G0W2 176 aa14.51□□□□□ -0.09
ACTN1-206ENST00000544964 CCDC178Q5BJE1 867 aa14.51□□□□□ -0.09
ACTN1-206ENST00000544964 BLOC1S2Q6QNY1 142 aa14.51□□□□□ -0.09
ACTN1-206ENST00000544964 DHX32Q7L7V1 743 aaKnown RBP14.51□□□□□ -0.09
ACTN1-206ENST00000544964 TMEM199Q8N511 208 aa14.51□□□□□ -0.09
ACTN1-206ENST00000544964 NOC4LQ9BVI4 516 aaKnown RBP14.51□□□□□ -0.09
ACTN1-206ENST00000544964 AP5M1Q9H0R1 490 aa14.51□□□□□ -0.09
ACTN1-206ENST00000544964 WNT8AQ9H1J5 351 aa14.51□□□□□ -0.09
ACTN1-206ENST00000544964 SENP2Q9HC62 589 aa14.51□□□□□ -0.09
ACTN1-206ENST00000544964 ADD3Q9UEY8 706 aaKnown RBP14.51□□□□□ -0.09
ACTN1-206ENST00000544964 LOC102724159A0A0B4J2E5 919 aa14.5□□□□□ -0.09
ACTN1-206ENST00000544964 RBM47A0AV96 593 aaKnown RBP14.5□□□□□ -0.09
ACTN1-206ENST00000544964 ERICH2A1L162 156 aa14.5□□□□□ -0.09
ACTN1-206ENST00000544964 PTPDC1A2A3K4 754 aa14.5□□□□□ -0.09
ACTN1-206ENST00000544964 GRXCR1A8MXD5 290 aa14.5□□□□□ -0.09
ACTN1-206ENST00000544964 B4GALT4O60513 344 aa14.5□□□□□ -0.09
ACTN1-206ENST00000544964 HMGB1P09429 215 aaKnown RBP14.5□□□□□ -0.09
ACTN1-206ENST00000544964 RPS6KB1P23443 525 aa14.5□□□□□ -0.09
ACTN1-206ENST00000544964 PBX2P40425 430 aa14.5□□□□□ -0.09
ACTN1-206ENST00000544964 RPS6P62753 249 aaKnown RBP14.5□□□□□ -0.09
ACTN1-206ENST00000544964 PWP2Q15269 919 aaKnown RBP14.5□□□□□ -0.09
ACTN1-206ENST00000544964 TMEM67Q5HYA8 995 aa14.5□□□□□ -0.09
ACTN1-206ENST00000544964 PSRC1Q6PGN9 363 aaPredicted RBP14.5□□□□□ -0.09
ACTN1-206ENST00000544964 ZNF365Q70YC5 407 aa14.5□□□□□ -0.09
ACTN1-206ENST00000544964 DGKHQ86XP1 1220 aa14.5□□□□□ -0.09
ACTN1-206ENST00000544964 IGDCC4Q8TDY8 1250 aa14.5□□□□□ -0.09
ACTN1-206ENST00000544964 TIFAQ96CG3 184 aa14.5□□□□□ -0.09
ACTN1-206ENST00000544964 VWCEQ96DN2 955 aa14.5□□□□□ -0.09
ACTN1-206ENST00000544964 TTC14Q96N46 770 aa14.5□□□□□ -0.09
ACTN1-206ENST00000544964 PBX4Q9BYU1 374 aa14.5□□□□□ -0.09
ACTN1-206ENST00000544964 UPF3BQ9BZI7 483 aaKnown RBP14.5□□□□□ -0.09
ACTN1-206ENST00000544964 TRPV6Q9H1D0 765 aa14.5□□□□□ -0.09
ACTN1-206ENST00000544964 HIPK3Q9H422 1215 aa14.5□□□□□ -0.09
ACTN1-206ENST00000544964 ZSWIM6Q9HCJ5 1215 aa14.5□□□□□ -0.09
ACTN1-206ENST00000544964 IL23AQ9NPF7 189 aa14.5□□□□□ -0.09
ACTN1-206ENST00000544964 TRANK1O15050 2925 aa14.5□□□□□ -0.09
ACTN1-206ENST00000544964 REV3LO60673 3130 aa14.49□□□□□ -0.09
ACTN1-206ENST00000544964 SH2B2O14492 632 aaPredicted RBP14.49□□□□□ -0.09
ACTN1-206ENST00000544964 CALML3P27482 149 aa14.49□□□□□ -0.09
ACTN1-206ENST00000544964 RBM25P49756 843 aaKnown RBP14.49□□□□□ -0.09
ACTN1-206ENST00000544964 WTAPQ15007 396 aa14.49□□□□□ -0.09
ACTN1-206ENST00000544964 SART3Q15020 963 aaKnown RBP14.49□□□□□ -0.09
ACTN1-206ENST00000544964 IFIT1BQ5T764 474 aaKnown RBP14.49□□□□□ -0.09
ACTN1-206ENST00000544964 RNF207Q6ZRF8 634 aa14.49□□□□□ -0.09
ACTN1-206ENST00000544964 RUFY3Q7L099 469 aa14.49□□□□□ -0.09
ACTN1-206ENST00000544964 USP38Q8NB14 1042 aa14.49□□□□□ -0.09
ACTN1-206ENST00000544964 ANKS1AQ92625 1134 aa14.49□□□□□ -0.09
ACTN1-206ENST00000544964 TMEM87BQ96K49 555 aa14.49□□□□□ -0.09
ACTN1-206ENST00000544964 WDR11Q9BZH6 1224 aa14.49□□□□□ -0.09
ACTN1-206ENST00000544964 TM6SF1Q9BZW5 370 aa14.49□□□□□ -0.09
ACTN1-206ENST00000544964 CPVLQ9H3G5 476 aa14.49□□□□□ -0.09
ACTN1-206ENST00000544964 ZNF576Q9H609 170 aa14.49□□□□□ -0.09
ACTN1-206ENST00000544964 KAT14Q9H8E8 782 aa14.49□□□□□ -0.09
ACTN1-206ENST00000544964 CXXC1Q9P0U4 656 aaPredicted RBP14.49□□□□□ -0.09
ACTN1-206ENST00000544964 CYP46A1Q9Y6A2 500 aa14.49□□□□□ -0.09
ACTN1-206ENST00000544964 TET1Q8NFU7 2136 aa14.48□□□□□ -0.09
ACTN1-206ENST00000544964 ZEB2O60315 1214 aa14.48□□□□□ -0.09
ACTN1-206ENST00000544964 GOLGA8HP0CJ92 632 aa14.48□□□□□ -0.09
ACTN1-206ENST00000544964 PURAQ00577 322 aaKnown RBP14.48□□□□□ -0.09
ACTN1-206ENST00000544964 Q6ZUG5 572 aa14.48□□□□□ -0.09
ACTN1-206ENST00000544964 HERVK_113Q902F9 699 aa14.48□□□□□ -0.09
ACTN1-206ENST00000544964 TBC1D32Q96NH3 1257 aa14.48□□□□□ -0.09
ACTN1-206ENST00000544964 SEZ6LQ9BYH1 1024 aa14.48□□□□□ -0.09
ACTN1-206ENST00000544964 ALDH8A1Q9H2A2 487 aaPredicted RBP14.48□□□□□ -0.09
ACTN1-206ENST00000544964 LY9Q9HBG7 655 aa14.48□□□□□ -0.09
ACTN1-206ENST00000544964 FGD1P98174 961 aa14.47□□□□□ -0.09
ACTN1-206ENST00000544964 CDC37Q16543 378 aaPredicted RBP14.47□□□□□ -0.09
ACTN1-206ENST00000544964 GPATCH4Q5T3I0 446 aaKnown RBP14.47□□□□□ -0.09
ACTN1-206ENST00000544964 NFXL1Q6ZNB6 911 aa14.47□□□□□ -0.09
ACTN1-206ENST00000544964 PNMA1Q8ND90 353 aa14.47□□□□□ -0.09
ACTN1-206ENST00000544964 DNERQ8NFT8 737 aa14.47□□□□□ -0.09
ACTN1-206ENST00000544964 IL17RAQ96F46 866 aa14.47□□□□□ -0.09
ACTN1-206ENST00000544964 KIF2CQ99661 725 aa14.47□□□□□ -0.09
ACTN1-206ENST00000544964 TRMT13Q9NUP7 481 aaKnown RBP14.47□□□□□ -0.09
ACTN1-206ENST00000544964 PNMA2Q9UL42 364 aa14.47□□□□□ -0.09
ACTN1-206ENST00000544964 PTPRSQ13332 1948 aa14.47□□□□□ -0.09
ACTN1-206ENST00000544964 ARIH2O95376 493 aa14.46□□□□□ -0.09
ACTN1-206ENST00000544964 CCL23P55773 120 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms