RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	TEX2	Q8IWB9	1127 aa		7.81	□□□□□ -1.16
LEMD3-205	ENST00000544506	PTPRN2	Q92932	1015 aa		7.81	□□□□□ -1.16
LEMD3-205	ENST00000544506	FANCL	Q9NW38	375 aa		7.81	□□□□□ -1.16
LEMD3-205	ENST00000544506	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	7.81	□□□□□ -1.16
LEMD3-205	ENST00000544506	FUCA1	P04066	466 aa		7.8	□□□□□ -1.16
LEMD3-205	ENST00000544506	FPR2	P25090	351 aa		7.8	□□□□□ -1.16
LEMD3-205	ENST00000544506	PDE6B	P35913	854 aa		7.8	□□□□□ -1.16
LEMD3-205	ENST00000544506	GTF2A2	P52657	109 aa		7.8	□□□□□ -1.16
LEMD3-205	ENST00000544506	GABRE	P78334	506 aa		7.8	□□□□□ -1.16
LEMD3-205	ENST00000544506	BICRAL	Q6AI39	1079 aa		7.8	□□□□□ -1.16
LEMD3-205	ENST00000544506	MAMDC2	Q7Z304	686 aa	Predicted RBP	7.8	□□□□□ -1.16
LEMD3-205	ENST00000544506	IRF2BP1	Q8IU81	584 aa		7.8	□□□□□ -1.16
LEMD3-205	ENST00000544506	NLGN1	Q8N2Q7	840 aa		7.8	□□□□□ -1.16
LEMD3-205	ENST00000544506	PLEKHO2	Q8TD55	490 aa		7.8	□□□□□ -1.16
LEMD3-205	ENST00000544506	ZFYVE21	Q9BQ24	234 aa		7.8	□□□□□ -1.16
LEMD3-205	ENST00000544506	NCOA5	Q9HCD5	579 aa	Known RBP	7.8	□□□□□ -1.16
LEMD3-205	ENST00000544506	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	7.8	□□□□□ -1.16
LEMD3-205	ENST00000544506	TMA7	Q9Y2S6	64 aa	Known RBP	7.8	□□□□□ -1.16
LEMD3-205	ENST00000544506	TLDC2	A0PJX2	215 aa		7.79	□□□□□ -1.16
LEMD3-205	ENST00000544506	DBH	P09172	617 aa		7.79	□□□□□ -1.16
LEMD3-205	ENST00000544506	GPR85	P60893	370 aa		7.79	□□□□□ -1.16
LEMD3-205	ENST00000544506	LSAMP	Q13449	338 aa		7.79	□□□□□ -1.16
LEMD3-205	ENST00000544506	HOMER1	Q86YM7	354 aa		7.79	□□□□□ -1.16
LEMD3-205	ENST00000544506	IFNL3	Q8IZI9	196 aa		7.79	□□□□□ -1.16
LEMD3-205	ENST00000544506		Q8N1Y9	231 aa		7.79	□□□□□ -1.16
LEMD3-205	ENST00000544506	USP33	Q8TEY7	942 aa		7.79	□□□□□ -1.16
LEMD3-205	ENST00000544506	APPBP2	Q92624	585 aa		7.79	□□□□□ -1.16
LEMD3-205	ENST00000544506	CHAMP1	Q96JM3	812 aa		7.79	□□□□□ -1.16
LEMD3-205	ENST00000544506	SLC52A2	Q9HAB3	445 aa		7.79	□□□□□ -1.16
LEMD3-205	ENST00000544506	PPARGC1A	Q9UBK2	798 aa	Known RBP	7.79	□□□□□ -1.16
LEMD3-205	ENST00000544506	NDOR1	Q9UHB4	597 aa		7.79	□□□□□ -1.16
LEMD3-205	ENST00000544506	OR14I1	A6ND48	311 aa		7.78	□□□□□ -1.16
LEMD3-205	ENST00000544506	ASMTL	O95671	621 aa		7.78	□□□□□ -1.16
LEMD3-205	ENST00000544506	GLI4	P10075	376 aa		7.78	□□□□□ -1.16
LEMD3-205	ENST00000544506	RBM10	P98175	930 aa	Known RBP	7.78	□□□□□ -1.16
LEMD3-205	ENST00000544506	TRIM61	Q5EBN2	209 aa		7.78	□□□□□ -1.16
LEMD3-205	ENST00000544506	LBX2	Q6XYB7	198 aa		7.78	□□□□□ -1.16
LEMD3-205	ENST00000544506	PRR23B	Q6ZRT6	265 aa		7.78	□□□□□ -1.16
LEMD3-205	ENST00000544506	CEP68	Q76N32	757 aa		7.78	□□□□□ -1.16
LEMD3-205	ENST00000544506	CABP7	Q86V35	215 aa		7.78	□□□□□ -1.16
LEMD3-205	ENST00000544506	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	7.78	□□□□□ -1.16
LEMD3-205	ENST00000544506	MRPL4	Q9BYD3	311 aa	Known RBP	7.78	□□□□□ -1.16
LEMD3-205	ENST00000544506	SFMBT1	Q9UHJ3	866 aa		7.78	□□□□□ -1.16
LEMD3-205	ENST00000544506	NUDT19	A8MXV4	375 aa		7.77	□□□□□ -1.17
LEMD3-205	ENST00000544506	C22orf46	C9J442	243 aa		7.77	□□□□□ -1.17
LEMD3-205	ENST00000544506	AQP7	O14520	342 aa		7.77	□□□□□ -1.17
LEMD3-205	ENST00000544506	ENPP3	O14638	875 aa		7.77	□□□□□ -1.17
LEMD3-205	ENST00000544506	PLD2	O14939	933 aa		7.77	□□□□□ -1.17
LEMD3-205	ENST00000544506	PPP1R12A	O14974	1030 aa	Predicted RBP	7.77	□□□□□ -1.17
LEMD3-205	ENST00000544506	SRGAP3	O43295	1099 aa		7.77	□□□□□ -1.17
LEMD3-205	ENST00000544506	CDC45	O75419	566 aa		7.77	□□□□□ -1.17
LEMD3-205	ENST00000544506	CBX2	Q14781	532 aa	Predicted RBP	7.77	□□□□□ -1.17
LEMD3-205	ENST00000544506	MLANA	Q16655	118 aa		7.77	□□□□□ -1.17
LEMD3-205	ENST00000544506	WWC2	Q6AWC2	1192 aa		7.77	□□□□□ -1.17
LEMD3-205	ENST00000544506	GSTCD	Q8NEC7	633 aa		7.77	□□□□□ -1.17
LEMD3-205	ENST00000544506	SLC7A14	Q8TBB6	771 aa		7.77	□□□□□ -1.17
LEMD3-205	ENST00000544506	TRMT2B	Q96GJ1	504 aa	Known RBP	7.77	□□□□□ -1.17
LEMD3-205	ENST00000544506	TMEM169	Q96HH4	297 aa		7.77	□□□□□ -1.17
LEMD3-205	ENST00000544506	DIRC2	Q96SL1	478 aa		7.77	□□□□□ -1.17
LEMD3-205	ENST00000544506	NSUN3	Q9H649	340 aa	Known RBP	7.77	□□□□□ -1.17
LEMD3-205	ENST00000544506	CLDND1	Q9NY35	253 aa		7.77	□□□□□ -1.17
LEMD3-205	ENST00000544506		X6R8D5	127 aa		7.77	□□□□□ -1.17
LEMD3-205	ENST00000544506	LRRC10B	A6NIK2	292 aa		7.76	□□□□□ -1.17
LEMD3-205	ENST00000544506		H7BY64	318 aa		7.76	□□□□□ -1.17
LEMD3-205	ENST00000544506	RAPGEF3	O95398	923 aa		7.76	□□□□□ -1.17
LEMD3-205	ENST00000544506	NTRK1	P04629	796 aa		7.76	□□□□□ -1.17
LEMD3-205	ENST00000544506	CYBB	P04839	570 aa		7.76	□□□□□ -1.17
LEMD3-205	ENST00000544506	MPO	P05164	745 aa		7.76	□□□□□ -1.17
LEMD3-205	ENST00000544506	RAB3GAP1	Q15042	981 aa		7.76	□□□□□ -1.17
LEMD3-205	ENST00000544506	KIZ	Q2M2Z5	673 aa		7.76	□□□□□ -1.17
LEMD3-205	ENST00000544506	RPTN	Q6XPR3	784 aa		7.76	□□□□□ -1.17
LEMD3-205	ENST00000544506	C16orf86	Q6ZW13	317 aa		7.76	□□□□□ -1.17
LEMD3-205	ENST00000544506	MTDH	Q86UE4	582 aa	Known RBP	7.76	□□□□□ -1.17
LEMD3-205	ENST00000544506	CDIP1	Q9H305	208 aa		7.76	□□□□□ -1.17
LEMD3-205	ENST00000544506	RXFP1	Q9HBX9	757 aa		7.76	□□□□□ -1.17
LEMD3-205	ENST00000544506	FAM53C	Q9NYF3	392 aa		7.76	□□□□□ -1.17
LEMD3-205	ENST00000544506	EFCAB14	O75071	495 aa		7.75	□□□□□ -1.17
LEMD3-205	ENST00000544506	GRK2	P25098	689 aa		7.75	□□□□□ -1.17
LEMD3-205	ENST00000544506	GRK3	P35626	688 aa		7.75	□□□□□ -1.17
LEMD3-205	ENST00000544506	TCEA2	Q15560	299 aa		7.75	□□□□□ -1.17
LEMD3-205	ENST00000544506	TKFC	Q3LXA3	575 aa		7.75	□□□□□ -1.17
LEMD3-205	ENST00000544506	SDE2	Q6IQ49	451 aa		7.75	□□□□□ -1.17
LEMD3-205	ENST00000544506	PAQR3	Q6TCH7	311 aa		7.75	□□□□□ -1.17
LEMD3-205	ENST00000544506	BRAP	Q7Z569	592 aa		7.75	□□□□□ -1.17
LEMD3-205	ENST00000544506	ZNF605	Q86T29	641 aa		7.75	□□□□□ -1.17
LEMD3-205	ENST00000544506	NETO2	Q8NC67	525 aa		7.75	□□□□□ -1.17
LEMD3-205	ENST00000544506	CLUHP3	Q96NS8	147 aa		7.75	□□□□□ -1.17
LEMD3-205	ENST00000544506	EPB41L4B	Q9H329	900 aa		7.75	□□□□□ -1.17
LEMD3-205	ENST00000544506	KLHL14	Q9P2G3	628 aa		7.75	□□□□□ -1.17
LEMD3-205	ENST00000544506	COA3	Q9Y2R0	106 aa	Predicted RBP	7.75	□□□□□ -1.17
LEMD3-205	ENST00000544506	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	7.74	□□□□□ -1.17
LEMD3-205	ENST00000544506	ZC3H12D	A2A288	527 aa	Known RBP	7.74	□□□□□ -1.17
LEMD3-205	ENST00000544506	KCNQ2	O43526	872 aa		7.74	□□□□□ -1.17
LEMD3-205	ENST00000544506	NR1I3	Q14994	352 aa		7.74	□□□□□ -1.17
LEMD3-205	ENST00000544506	PLEKHN1	Q494U1	663 aa	Predicted RBP	7.74	□□□□□ -1.17
LEMD3-205	ENST00000544506	FNDC3B	Q53EP0	1204 aa	Known RBP	7.74	□□□□□ -1.17
LEMD3-205	ENST00000544506	MROH9	Q5TGP6	573 aa		7.74	□□□□□ -1.17
LEMD3-205	ENST00000544506	RIOX2	Q8IUF8	465 aa		7.74	□□□□□ -1.17
LEMD3-205	ENST00000544506	SYNPO	Q8N3V7	929 aa		7.74	□□□□□ -1.17
LEMD3-205	ENST00000544506	ALG1	Q9BT22	464 aa		7.74	□□□□□ -1.17

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