RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 CERKLQ49MI3 558 aaPredicted RBP15.57■□□□□ 0.08
MSH2-206ENST00000543555 CSGALNACT2Q8N6G5 542 aa15.57■□□□□ 0.08
MSH2-206ENST00000543555 ZNF507Q8TCN5 953 aa15.57■□□□□ 0.08
MSH2-206ENST00000543555 KIFC2Q96AC6 838 aa15.57■□□□□ 0.08
MSH2-206ENST00000543555 NYAP2Q9P242 653 aa15.57■□□□□ 0.08
MSH2-206ENST00000543555 A0A1W2PQC6 194 aa15.57■□□□□ 0.08
MSH2-206ENST00000543555 POTEMA6NI47 508 aa15.57■□□□□ 0.08
MSH2-206ENST00000543555 FCER1AP12319 257 aa15.57■□□□□ 0.08
MSH2-206ENST00000543555 COBLL1Q53SF7 1204 aa15.57■□□□□ 0.08
MSH2-206ENST00000543555 CNNM4Q6P4Q7 775 aa15.57■□□□□ 0.08
MSH2-206ENST00000543555 SH3BP5LQ7L8J4 393 aa15.57■□□□□ 0.08
MSH2-206ENST00000543555 CDK5RAP3Q96JB5 506 aa15.57■□□□□ 0.08
MSH2-206ENST00000543555 PSTPIP2Q9H939 334 aa15.57■□□□□ 0.08
MSH2-206ENST00000543555 PPIP5K2O43314 1243 aa15.57■□□□□ 0.08
MSH2-206ENST00000543555 ERVK-24P63145 666 aa15.57■□□□□ 0.08
MSH2-206ENST00000543555 SHROOM1Q2M3G4 852 aaPredicted RBP15.57■□□□□ 0.08
MSH2-206ENST00000543555 DCAF4Q8WV16 495 aa15.57■□□□□ 0.08
MSH2-206ENST00000543555 LARP4BQ92615 738 aaKnown RBP15.57■□□□□ 0.08
MSH2-206ENST00000543555 KANSL2Q9H9L4 492 aa15.57■□□□□ 0.08
MSH2-206ENST00000543555 DDX25Q9UHL0 483 aaKnown RBP15.57■□□□□ 0.08
MSH2-206ENST00000543555 NPM3O75607 178 aaKnown RBP15.56■□□□□ 0.08
MSH2-206ENST00000543555 KRT9P35527 623 aa15.56■□□□□ 0.08
MSH2-206ENST00000543555 MCM6Q14566 821 aa15.56■□□□□ 0.08
MSH2-206ENST00000543555 DALRD3Q5D0E6 543 aaKnown RBP15.56■□□□□ 0.08
MSH2-206ENST00000543555 ANKRD40Q6AI12 368 aa15.56■□□□□ 0.08
MSH2-206ENST00000543555 ZSCAN29Q8IWY8 852 aaPredicted RBP15.56■□□□□ 0.08
MSH2-206ENST00000543555 KIAA0895Q8NCT3 520 aa15.56■□□□□ 0.08
MSH2-206ENST00000543555 SNX29Q8TEQ0 813 aa15.56■□□□□ 0.08
MSH2-206ENST00000543555 FEZ1Q99689 392 aa15.56■□□□□ 0.08
MSH2-206ENST00000543555 SCN9AQ15858 1988 aa15.56■□□□□ 0.08
MSH2-206ENST00000543555 MYMKA6NI61 221 aa15.56■□□□□ 0.08
MSH2-206ENST00000543555 MAP3K9P80192 1104 aa15.56■□□□□ 0.08
MSH2-206ENST00000543555 KRT79Q5XKE5 535 aa15.56■□□□□ 0.08
MSH2-206ENST00000543555 SLFN13Q68D06 897 aa15.56■□□□□ 0.08
MSH2-206ENST00000543555 TATDN1Q6P1N9 297 aa15.56■□□□□ 0.08
MSH2-206ENST00000543555 FBXO38Q6PIJ6 1188 aa15.56■□□□□ 0.08
MSH2-206ENST00000543555 CYP26C1Q6V0L0 522 aa15.56■□□□□ 0.08
MSH2-206ENST00000543555 MNS1Q8NEH6 495 aa15.56■□□□□ 0.08
MSH2-206ENST00000543555 LZTFL1Q9NQ48 299 aa15.56■□□□□ 0.08
MSH2-206ENST00000543555 SERPINA10Q9UK55 444 aa15.56■□□□□ 0.08
MSH2-206ENST00000543555 ZNF646O15015 1829 aaPredicted RBP15.56■□□□□ 0.08
MSH2-206ENST00000543555 GCFC2P16383 781 aaKnown RBP15.55■□□□□ 0.08
MSH2-206ENST00000543555 SLC1A4P43007 532 aa15.55■□□□□ 0.08
MSH2-206ENST00000543555 RASSF7Q02833 373 aa15.55■□□□□ 0.08
MSH2-206ENST00000543555 QRICH1Q2TAL8 776 aa15.55■□□□□ 0.08
MSH2-206ENST00000543555 UNC13DQ70J99 1090 aa15.55■□□□□ 0.08
MSH2-206ENST00000543555 NUDT12Q9BQG2 462 aa15.55■□□□□ 0.08
MSH2-206ENST00000543555 TRIM34Q9BYJ4 488 aa15.55■□□□□ 0.08
MSH2-206ENST00000543555 A0A0U1RQJ8 604 aa15.55■□□□□ 0.08
MSH2-206ENST00000543555 PVALEFA0A1B0GWK0 134 aa15.55■□□□□ 0.08
MSH2-206ENST00000543555 PES1O00541 588 aaKnown RBP15.55■□□□□ 0.08
MSH2-206ENST00000543555 RAD17O75943 681 aa15.55■□□□□ 0.08
MSH2-206ENST00000543555 DNM2P50570 870 aa15.55■□□□□ 0.08
MSH2-206ENST00000543555 FAM114A1Q8IWE2 563 aa15.55■□□□□ 0.08
MSH2-206ENST00000543555 ATRIPQ8WXE1 791 aa15.55■□□□□ 0.08
MSH2-206ENST00000543555 RAD54LQ92698 747 aa15.55■□□□□ 0.08
MSH2-206ENST00000543555 HAS1Q92839 578 aa15.55■□□□□ 0.08
MSH2-206ENST00000543555 HPS3Q969F9 1004 aa15.55■□□□□ 0.08
MSH2-206ENST00000543555 TUBGCP2Q9BSJ2 902 aa15.55■□□□□ 0.08
MSH2-206ENST00000543555 CARD6Q9BX69 1037 aa15.55■□□□□ 0.08
MSH2-206ENST00000543555 RAD21O60216 631 aa15.54■□□□□ 0.08
MSH2-206ENST00000543555 TMEM119Q4V9L6 283 aa15.54■□□□□ 0.08
MSH2-206ENST00000543555 IRX2Q9BZI1 471 aaPredicted RBP15.54■□□□□ 0.08
MSH2-206ENST00000543555 GLT8D2Q9H1C3 349 aa15.54■□□□□ 0.08
MSH2-206ENST00000543555 MRFAP1Q9Y605 127 aa15.54■□□□□ 0.08
MSH2-206ENST00000543555 TTC26A0AVF1 554 aa15.54■□□□□ 0.08
MSH2-206ENST00000543555 B4DLN1 442 aa15.54■□□□□ 0.08
MSH2-206ENST00000543555 TADA3O75528 432 aa15.54■□□□□ 0.08
MSH2-206ENST00000543555 PRKCSHP14314 528 aaPredicted RBP15.54■□□□□ 0.08
MSH2-206ENST00000543555 SEPT2Q15019 361 aa15.54■□□□□ 0.08
MSH2-206ENST00000543555 TMEM179Q6ZVK1 233 aa15.54■□□□□ 0.08
MSH2-206ENST00000543555 SIAH1Q8IUQ4 282 aa15.54■□□□□ 0.08
MSH2-206ENST00000543555 CNOT6LQ96LI5 555 aaKnown RBP15.54■□□□□ 0.08
MSH2-206ENST00000543555 NAP1L4Q99733 375 aaKnown RBP15.54■□□□□ 0.08
MSH2-206ENST00000543555 SLC39A2Q9NP94 309 aa15.54■□□□□ 0.08
MSH2-206ENST00000543555 TGFB2P61812 414 aa15.54■□□□□ 0.08
MSH2-206ENST00000543555 ICA1Q05084 483 aa15.54■□□□□ 0.08
MSH2-206ENST00000543555 CDC37Q16543 378 aaPredicted RBP15.54■□□□□ 0.08
MSH2-206ENST00000543555 ACRBPQ8NEB7 543 aa15.54■□□□□ 0.08
MSH2-206ENST00000543555 UBXN4Q92575 508 aa15.54■□□□□ 0.08
MSH2-206ENST00000543555 EEF2KMTQ96G04 330 aa15.54■□□□□ 0.08
MSH2-206ENST00000543555 PCDHA1Q9Y5I3 950 aa15.54■□□□□ 0.08
MSH2-206ENST00000543555 SPDYE4A6NLX3 237 aa15.53■□□□□ 0.08
MSH2-206ENST00000543555 KIF5CO60282 957 aa15.53■□□□□ 0.08
MSH2-206ENST00000543555 CENPPQ6IPU0 288 aa15.53■□□□□ 0.08
MSH2-206ENST00000543555 KCNK18Q7Z418 384 aa15.53■□□□□ 0.08
MSH2-206ENST00000543555 LARGE2Q8N3Y3 721 aa15.53■□□□□ 0.08
MSH2-206ENST00000543555 SEMA6BQ9H3T3 888 aa15.53■□□□□ 0.08
MSH2-206ENST00000543555 CAPN11Q9UMQ6 739 aa15.53■□□□□ 0.08
MSH2-206ENST00000543555 ZBTB12Q9Y330 459 aaPredicted RBP15.53■□□□□ 0.08
MSH2-206ENST00000543555 EFCAB8A8MWE9 144 aa15.53■□□□□ 0.08
MSH2-206ENST00000543555 USP17L15C9J2P7 530 aa15.53■□□□□ 0.08
MSH2-206ENST00000543555 USP17L13C9JLJ4 530 aa15.53■□□□□ 0.08
MSH2-206ENST00000543555 USP17L11C9JVI0 530 aa15.53■□□□□ 0.08
MSH2-206ENST00000543555 USP17L18D6R9N7 530 aa15.53■□□□□ 0.08
MSH2-206ENST00000543555 USP17L22D6RA61 530 aa15.53■□□□□ 0.08
MSH2-206ENST00000543555 USP17L17D6RBQ6 530 aa15.53■□□□□ 0.08
MSH2-206ENST00000543555 USP17L19D6RCP7 530 aa15.53■□□□□ 0.08
MSH2-206ENST00000543555 USP17L20D6RJB6 530 aa15.53■□□□□ 0.08
MSH2-206ENST00000543555 H2AFXP16104 143 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms