RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 SH2B2O14492 632 aaPredicted RBP15.24■□□□□ 0.03
TNFRSF1A-215ENST00000543359 PRC1O43663 620 aa15.24■□□□□ 0.03
TNFRSF1A-215ENST00000543359 TIMP1P01033 207 aa15.24■□□□□ 0.03
TNFRSF1A-215ENST00000543359 SART3Q15020 963 aaKnown RBP15.24■□□□□ 0.03
TNFRSF1A-215ENST00000543359 CATIPQ7Z7H3 387 aa15.24■□□□□ 0.03
TNFRSF1A-215ENST00000543359 NSUN6Q8TEA1 469 aaKnown RBP15.24■□□□□ 0.03
TNFRSF1A-215ENST00000543359 SCFD2Q8WU76 684 aa15.24■□□□□ 0.03
TNFRSF1A-215ENST00000543359 COPS5Q92905 334 aa15.24■□□□□ 0.03
TNFRSF1A-215ENST00000543359 VTI1AQ96AJ9 217 aa15.24■□□□□ 0.03
TNFRSF1A-215ENST00000543359 IWS1Q96ST2 819 aa15.24■□□□□ 0.03
TNFRSF1A-215ENST00000543359 RMDN3Q96TC7 470 aa15.24■□□□□ 0.03
TNFRSF1A-215ENST00000543359 SCN10AQ9Y5Y9 1956 aa15.24■□□□□ 0.03
TNFRSF1A-215ENST00000543359 KIAA1217Q5T5P2 1943 aa15.23■□□□□ 0.03
TNFRSF1A-215ENST00000543359 A6NJR5 290 aa15.23■□□□□ 0.03
TNFRSF1A-215ENST00000543359 RAG1P15918 1043 aa15.23■□□□□ 0.03
TNFRSF1A-215ENST00000543359 MCM5P33992 734 aa15.23■□□□□ 0.03
TNFRSF1A-215ENST00000543359 ITGA7Q13683 1181 aa15.23■□□□□ 0.03
TNFRSF1A-215ENST00000543359 ZNF654Q8IZM8 581 aa15.23■□□□□ 0.03
TNFRSF1A-215ENST00000543359 MPHOSPH6Q99547 160 aaKnown RBP15.23■□□□□ 0.03
TNFRSF1A-215ENST00000543359 ANO2Q9NQ90 1003 aa15.23■□□□□ 0.03
TNFRSF1A-215ENST00000543359 UNC80Q8N2C7 3258 aa15.22■□□□□ 0.03
TNFRSF1A-215ENST00000543359 PNMA6FA0A0J9YX94 578 aa15.22■□□□□ 0.03
TNFRSF1A-215ENST00000543359 B4DLN1 442 aa15.22■□□□□ 0.03
TNFRSF1A-215ENST00000543359 NKRFO15226 690 aaKnown RBP eCLIP15.22■□□□□ 0.03
TNFRSF1A-215ENST00000543359 ZEB2O60315 1214 aa15.22■□□□□ 0.03
TNFRSF1A-215ENST00000543359 CFBP00751 764 aa15.22■□□□□ 0.03
TNFRSF1A-215ENST00000543359 TXNP10599 105 aaKnown RBP15.22■□□□□ 0.03
TNFRSF1A-215ENST00000543359 LIFRP42702 1097 aa15.22■□□□□ 0.03
TNFRSF1A-215ENST00000543359 MRPL12P52815 198 aaKnown RBP15.22■□□□□ 0.03
TNFRSF1A-215ENST00000543359 PSMC6P62333 389 aa15.22■□□□□ 0.03
TNFRSF1A-215ENST00000543359 PURAQ00577 322 aaKnown RBP15.22■□□□□ 0.03
TNFRSF1A-215ENST00000543359 PPP2R5BQ15173 497 aa15.22■□□□□ 0.03
TNFRSF1A-215ENST00000543359 STXBP2Q15833 593 aa15.22■□□□□ 0.03
TNFRSF1A-215ENST00000543359 MFSD5Q6N075 450 aa15.22■□□□□ 0.03
TNFRSF1A-215ENST00000543359 C16orf59Q7L2K0 433 aa15.22■□□□□ 0.03
TNFRSF1A-215ENST00000543359 HOMER1Q86YM7 354 aa15.22■□□□□ 0.03
TNFRSF1A-215ENST00000543359 RASEFQ8IZ41 740 aa15.22■□□□□ 0.03
TNFRSF1A-215ENST00000543359 OR6J1Q8NGC5 347 aa15.22■□□□□ 0.03
TNFRSF1A-215ENST00000543359 TMEM87BQ96K49 555 aa15.22■□□□□ 0.03
TNFRSF1A-215ENST00000543359 MYL10Q9BUA6 226 aa15.22■□□□□ 0.03
TNFRSF1A-215ENST00000543359 SEZ6LQ9BYH1 1024 aa15.22■□□□□ 0.03
TNFRSF1A-215ENST00000543359 TRPV6Q9H1D0 765 aa15.22■□□□□ 0.03
TNFRSF1A-215ENST00000543359 PXMP2Q9NR77 195 aa15.22■□□□□ 0.03
TNFRSF1A-215ENST00000543359 MAP3K20Q9NYL2 800 aaKnown RBP15.22■□□□□ 0.03
TNFRSF1A-215ENST00000543359 EIF3JO75822 258 aaKnown RBP15.21■□□□□ 0.03
TNFRSF1A-215ENST00000543359 RGS20O76081 388 aa15.21■□□□□ 0.03
TNFRSF1A-215ENST00000543359 DDAH1O94760 285 aa15.21■□□□□ 0.03
TNFRSF1A-215ENST00000543359 NR3C2P08235 984 aa15.21■□□□□ 0.03
TNFRSF1A-215ENST00000543359 EIF2AK2P19525 551 aaKnown RBP15.21■□□□□ 0.03
TNFRSF1A-215ENST00000543359 SMARCA1P28370 1054 aa15.21■□□□□ 0.03
TNFRSF1A-215ENST00000543359 HOXA13P31271 388 aaPredicted RBP15.21■□□□□ 0.03
TNFRSF1A-215ENST00000543359 CPT1AP50416 773 aa15.21■□□□□ 0.03
TNFRSF1A-215ENST00000543359 EXOSC10Q01780 885 aaKnown RBP15.21■□□□□ 0.03
TNFRSF1A-215ENST00000543359 ARHGAP1Q07960 439 aa15.21■□□□□ 0.03
TNFRSF1A-215ENST00000543359 TTLL4Q14679 1199 aa15.21■□□□□ 0.03
TNFRSF1A-215ENST00000543359 TSGA10IPQ3SY00 556 aa15.21■□□□□ 0.03
TNFRSF1A-215ENST00000543359 CASC1Q6TDU7 716 aa15.21■□□□□ 0.03
TNFRSF1A-215ENST00000543359 Q7L0L9 218 aa15.21■□□□□ 0.03
TNFRSF1A-215ENST00000543359 VSIG10LQ86VR7 867 aa15.21■□□□□ 0.03
TNFRSF1A-215ENST00000543359 SAMD3Q8N6K7 520 aa15.21■□□□□ 0.03
TNFRSF1A-215ENST00000543359 SPZ1Q9BXG8 430 aa15.21■□□□□ 0.03
TNFRSF1A-215ENST00000543359 DDX41Q9UJV9 622 aaKnown RBP15.21■□□□□ 0.03
TNFRSF1A-215ENST00000543359 CHD7Q9P2D1 2997 aa15.21■□□□□ 0.02
TNFRSF1A-215ENST00000543359 PRUNE2Q8WUY3 3088 aa15.2■□□□□ 0.02
TNFRSF1A-215ENST00000543359 B4GALT4O60513 344 aa15.2■□□□□ 0.02
TNFRSF1A-215ENST00000543359 CDC45O75419 566 aa15.2■□□□□ 0.02
TNFRSF1A-215ENST00000543359 FPGSQ05932 587 aa15.2■□□□□ 0.02
TNFRSF1A-215ENST00000543359 LY6KQ17RY6 165 aa15.2■□□□□ 0.02
TNFRSF1A-215ENST00000543359 ARHGEF16Q5VV41 709 aa15.2■□□□□ 0.02
TNFRSF1A-215ENST00000543359 SEPT14Q6ZU15 432 aa15.2■□□□□ 0.02
TNFRSF1A-215ENST00000543359 SGMS1Q86VZ5 419 aa15.2■□□□□ 0.02
TNFRSF1A-215ENST00000543359 TMTC2Q8N394 836 aa15.2■□□□□ 0.02
TNFRSF1A-215ENST00000543359 SRBD1Q8N5C6 995 aaKnown RBP15.2■□□□□ 0.02
TNFRSF1A-215ENST00000543359 IL31RAQ8NI17 732 aa15.2■□□□□ 0.02
TNFRSF1A-215ENST00000543359 PDCD2LQ9BRP1 358 aa15.2■□□□□ 0.02
TNFRSF1A-215ENST00000543359 MTG1Q9BT17 334 aaPredicted RBP15.2■□□□□ 0.02
TNFRSF1A-215ENST00000543359 LRRC2Q9BYS8 371 aa15.2■□□□□ 0.02
TNFRSF1A-215ENST00000543359 POLR3EQ9NVU0 708 aa15.2■□□□□ 0.02
TNFRSF1A-215ENST00000543359 PLEKHA8P1O95397 391 aa15.19■□□□□ 0.02
TNFRSF1A-215ENST00000543359 FAM109BQ6ICB4 259 aaPredicted RBP15.19■□□□□ 0.02
TNFRSF1A-215ENST00000543359 DEFB123Q8N688 67 aa15.19■□□□□ 0.02
TNFRSF1A-215ENST00000543359 KCNB2Q92953 911 aa15.19■□□□□ 0.02
TNFRSF1A-215ENST00000543359 VWCEQ96DN2 955 aa15.19■□□□□ 0.02
TNFRSF1A-215ENST00000543359 CCDC136Q96JN2 1154 aa15.19■□□□□ 0.02
TNFRSF1A-215ENST00000543359 LZTS2Q9BRK4 669 aa15.19■□□□□ 0.02
TNFRSF1A-215ENST00000543359 ALDH8A1Q9H2A2 487 aaPredicted RBP15.19■□□□□ 0.02
TNFRSF1A-215ENST00000543359 MTMR10Q9NXD2 777 aa15.19■□□□□ 0.02
TNFRSF1A-215ENST00000543359 UMODL1Q5DID0 1318 aa15.18■□□□□ 0.02
TNFRSF1A-215ENST00000543359 GCOM1H8Y6P7 765 aaPredicted RBP15.18■□□□□ 0.02
TNFRSF1A-215ENST00000543359 TLR3O15455 904 aaKnown RBP15.18■□□□□ 0.02
TNFRSF1A-215ENST00000543359 KPNA6O60684 536 aa15.18■□□□□ 0.02
TNFRSF1A-215ENST00000543359 MYL3P08590 195 aa15.18■□□□□ 0.02
TNFRSF1A-215ENST00000543359 POLR2MP0CAP2 368 aa15.18■□□□□ 0.02
TNFRSF1A-215ENST00000543359 RXRAP19793 462 aa15.18■□□□□ 0.02
TNFRSF1A-215ENST00000543359 KIF5BP33176 963 aa15.18■□□□□ 0.02
TNFRSF1A-215ENST00000543359 CYP2C18P33260 490 aa15.18■□□□□ 0.02
TNFRSF1A-215ENST00000543359 TRAF1Q13077 416 aa15.18■□□□□ 0.02
TNFRSF1A-215ENST00000543359 PGM5Q15124 567 aa15.18■□□□□ 0.02
TNFRSF1A-215ENST00000543359 NBPF20Q3BBV1 942 aa15.18■□□□□ 0.02
TNFRSF1A-215ENST00000543359 ADCK5Q3MIX3 580 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms