RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 RESP18Q5W5W9 173 aa11.26□□□□□ -0.61
TOP3A-208ENST00000542570 DHX37Q8IY37 1157 aaKnown RBP11.26□□□□□ -0.61
TOP3A-208ENST00000542570 AZI2Q9H6S1 392 aa11.26□□□□□ -0.61
TOP3A-208ENST00000542570 TRPC6Q9Y210 931 aa11.26□□□□□ -0.61
TOP3A-208ENST00000542570 NPHP3-ACAD11A0A0J9YXS1 232 aa11.26□□□□□ -0.61
TOP3A-208ENST00000542570 FCER1AP12319 257 aa11.26□□□□□ -0.61
TOP3A-208ENST00000542570 KRT5P13647 590 aa11.26□□□□□ -0.61
TOP3A-208ENST00000542570 DDIT3P35638 169 aa11.26□□□□□ -0.61
TOP3A-208ENST00000542570 FAM47CQ5HY64 1035 aa11.26□□□□□ -0.61
TOP3A-208ENST00000542570 SPECC1LQ69YQ0 1117 aa11.26□□□□□ -0.61
TOP3A-208ENST00000542570 DPP9Q86TI2 863 aa11.26□□□□□ -0.61
TOP3A-208ENST00000542570 KCNB2Q92953 911 aa11.26□□□□□ -0.61
TOP3A-208ENST00000542570 RPAP3Q9H6T3 665 aaPredicted RBP11.26□□□□□ -0.61
TOP3A-208ENST00000542570 DISC1Q9NRI5 854 aa11.26□□□□□ -0.61
TOP3A-208ENST00000542570 PRR12Q9ULL5 1215 aa11.26□□□□□ -0.61
TOP3A-208ENST00000542570 CNTNAP5Q8WYK1 1306 aa11.26□□□□□ -0.61
TOP3A-208ENST00000542570 CASP14P31944 242 aa11.26□□□□□ -0.61
TOP3A-208ENST00000542570 GALNT17Q6IS24 598 aa11.26□□□□□ -0.61
TOP3A-208ENST00000542570 RNF207Q6ZRF8 634 aa11.26□□□□□ -0.61
TOP3A-208ENST00000542570 CDAN1Q8IWY9 1227 aa11.26□□□□□ -0.61
TOP3A-208ENST00000542570 PAF1Q8N7H5 531 aa11.26□□□□□ -0.61
TOP3A-208ENST00000542570 TEKT3Q9BXF9 490 aa11.26□□□□□ -0.61
TOP3A-208ENST00000542570 PRDM10Q9NQV6 1147 aa11.26□□□□□ -0.61
TOP3A-208ENST00000542570 MAD2L2Q9UI95 211 aa11.26□□□□□ -0.61
TOP3A-208ENST00000542570 RGPD2P0DJD1 1756 aa11.26□□□□□ -0.61
TOP3A-208ENST00000542570 BCL9LQ86UU0 1499 aa11.26□□□□□ -0.61
TOP3A-208ENST00000542570 AKAP12Q02952 1782 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 POTEB2H3BUK9 544 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 K7ENM7 598 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 RHOXF2BP0C7M4 288 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 CYLC1P35663 651 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-208ENST00000542570 TRAPPC10P48553 1259 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 OSTNP61366 133 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 MTERF2Q49AM1 385 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 METTL16Q86W50 562 aaKnown RBP11.25□□□□□ -0.61
TOP3A-208ENST00000542570 MPHOSPH6Q99547 160 aaKnown RBP11.25□□□□□ -0.61
TOP3A-208ENST00000542570 RHOXF2Q9BQY4 288 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 PHF20Q9BVI0 1012 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 NT5C3AQ9H0P0 336 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 ALDH8A1Q9H2A2 487 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-208ENST00000542570 RNF146Q9NTX7 359 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 KIF1AQ12756 1690 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 GOLGA8IPA6NC78 632 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 GOLGA8JA6NMD2 632 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 FOXP2O15409 715 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 PLA2G4BP0C869 781 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 EPB41P11171 864 aaKnown RBP11.25□□□□□ -0.61
TOP3A-208ENST00000542570 IL1R1P14778 569 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 KIF5AQ12840 1032 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 DDX12PQ92771 950 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 CCDC102AQ96A19 550 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 FNBP1Q96RU3 617 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 SEPT9Q9UHD8 586 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-208ENST00000542570 FOSP01100 380 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-208ENST00000542570 RPL13P26373 211 aaKnown RBP11.25□□□□□ -0.61
TOP3A-208ENST00000542570 TOB1P50616 345 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-208ENST00000542570 SMTNP53814 917 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 KCTD2Q14681 263 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 DACT2Q5SW24 774 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 RNF169Q8NCN4 708 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 FBXO2Q9UK22 296 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-208ENST00000542570 FAM205AQ6ZU69 1335 aa11.25□□□□□ -0.61
TOP3A-208ENST00000542570 POLR3GO15318 223 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-208ENST00000542570 SPATA1Q5VX52 437 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 TRERF1Q96PN7 1200 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 MTFR1LQ9H019 292 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 ANKFY1Q9P2R3 1169 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 SPDYE2BA6NHP3 402 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 WNT10BO00744 389 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 KRT19P08727 400 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 SPDYE6P0CI01 402 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 U2AF2P26368 475 aaKnown RBP eCLIP11.24□□□□□ -0.613e-6■■□□□ 13
TOP3A-208ENST00000542570 HOXA10P31260 410 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-208ENST00000542570 ZNF384Q8TF68 577 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 CEP170P1Q96L14 293 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 TUBGCP2Q9BSJ2 902 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 GLIS2Q9BZE0 524 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-208ENST00000542570 ABT1Q9ULW3 272 aaKnown RBP11.24□□□□□ -0.61
TOP3A-208ENST00000542570 KNDC1Q76NI1 1749 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 IGSF3O75054 1194 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 TNNI1P19237 187 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 PRCPP42785 496 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 RHBDL3P58872 404 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 GPS2Q13227 327 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 HLTFQ14527 1009 aaKnown RBP eCLIP11.24□□□□□ -0.61
TOP3A-208ENST00000542570 PRPF38AQ8NAV1 312 aaKnown RBP11.24□□□□□ -0.61
TOP3A-208ENST00000542570 TMEM87AQ8NBN3 555 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 FAM151AQ8WW52 585 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 IFT74Q96LB3 600 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 GSDMAQ96QA5 445 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 ANKRD26Q9UPS8 1709 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 MRC1P22897 1456 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 STXBP3O00186 592 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 NR2F2P24468 414 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 BAATQ14032 418 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-208ENST00000542570 DPF2Q92785 391 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 CNOT6LQ96LI5 555 aaKnown RBP11.24□□□□□ -0.61
TOP3A-208ENST00000542570 SERPINA10Q9UK55 444 aa11.24□□□□□ -0.61
TOP3A-208ENST00000542570 ZHX1Q9UKY1 873 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-208ENST00000542570 MYO3BQ8WXR4 1341 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms