RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 P2RX7Q99572 595 aaKnown RBP9.4□□□□□ -0.91
LMO3-226ENST00000541589 APBA2Q99767 749 aa9.4□□□□□ -0.91
LMO3-226ENST00000541589 ALG1Q9BT22 464 aa9.4□□□□□ -0.91
LMO3-226ENST00000541589 RBM28Q9NW13 759 aaKnown RBP9.4□□□□□ -0.91
LMO3-226ENST00000541589 RBPJLQ9UBG7 517 aa9.4□□□□□ -0.91
LMO3-226ENST00000541589 ADGRG1Q9Y653 693 aa9.4□□□□□ -0.91
LMO3-226ENST00000541589 GPR37O15354 613 aa9.39□□□□□ -0.91
LMO3-226ENST00000541589 GUCY1B3Q02153 619 aa9.39□□□□□ -0.91
LMO3-226ENST00000541589 RRP1BQ14684 758 aaKnown RBP9.39□□□□□ -0.91
LMO3-226ENST00000541589 SNX17Q15036 470 aa9.39□□□□□ -0.91
LMO3-226ENST00000541589 C16orf86Q6ZW13 317 aa9.39□□□□□ -0.91
LMO3-226ENST00000541589 BRAPQ7Z569 592 aa9.39□□□□□ -0.91
LMO3-226ENST00000541589 GPR142Q7Z601 462 aa9.39□□□□□ -0.91
LMO3-226ENST00000541589 DGKHQ86XP1 1220 aa9.39□□□□□ -0.91
LMO3-226ENST00000541589 TRIM22Q8IYM9 498 aa9.39□□□□□ -0.91
LMO3-226ENST00000541589 NUP133Q8WUM0 1156 aa9.39□□□□□ -0.91
LMO3-226ENST00000541589 LEO1Q8WVC0 666 aaPredicted RBP9.39□□□□□ -0.91
LMO3-226ENST00000541589 PHKBQ93100 1093 aa9.39□□□□□ -0.91
LMO3-226ENST00000541589 SPATA32Q96LK8 384 aa9.39□□□□□ -0.91
LMO3-226ENST00000541589 PORCNQ9H237 461 aa9.39□□□□□ -0.91
LMO3-226ENST00000541589 MKNK2Q9HBH9 465 aa9.39□□□□□ -0.91
LMO3-226ENST00000541589 TCP11L1Q9NUJ3 509 aa9.39□□□□□ -0.91
LMO3-226ENST00000541589 FLRT1Q9NZU1 646 aa9.39□□□□□ -0.91
LMO3-226ENST00000541589 TMEM63CQ9P1W3 806 aa9.39□□□□□ -0.91
LMO3-226ENST00000541589 DDX20Q9UHI6 824 aaKnown RBP9.39□□□□□ -0.91
LMO3-226ENST00000541589 SAP30BPQ9UHR5 308 aaKnown RBP9.39□□□□□ -0.91
LMO3-226ENST00000541589 FRMPD3Q5JV73 1810 aa9.38□□□□□ -0.91
LMO3-226ENST00000541589 CDK5RAP2Q96SN8 1893 aa9.38□□□□□ -0.91
LMO3-226ENST00000541589 FAM196BA6NMK8 535 aa9.38□□□□□ -0.91
LMO3-226ENST00000541589 USP17L5A8MUK1 530 aa9.38□□□□□ -0.91
LMO3-226ENST00000541589 MSCO60682 206 aa9.38□□□□□ -0.91
LMO3-226ENST00000541589 IGHA2P01877 340 aa9.38□□□□□ -0.91
LMO3-226ENST00000541589 CAP2P40123 477 aa9.38□□□□□ -0.91
LMO3-226ENST00000541589 MRE11P49959 708 aa9.38□□□□□ -0.91
LMO3-226ENST00000541589 HERVK_113P62684 666 aa9.38□□□□□ -0.91
LMO3-226ENST00000541589 ERVK-9P63128 1117 aa9.38□□□□□ -0.91
LMO3-226ENST00000541589 ERVK-24P63145 666 aa9.38□□□□□ -0.91
LMO3-226ENST00000541589 IRX3P78415 501 aaPredicted RBP9.38□□□□□ -0.91
LMO3-226ENST00000541589 TFAP4Q01664 338 aa9.38□□□□□ -0.91
LMO3-226ENST00000541589 TRIM29Q14134 588 aa9.38□□□□□ -0.91
LMO3-226ENST00000541589 FAM47AQ5JRC9 791 aa9.38□□□□□ -0.91
LMO3-226ENST00000541589 SLC39A5Q6ZMH5 540 aa9.38□□□□□ -0.91
LMO3-226ENST00000541589 ZNF444Q8N0Y2 327 aaPredicted RBP9.38□□□□□ -0.91
LMO3-226ENST00000541589 CRACR2BQ8N4Y2 399 aaPredicted RBP9.38□□□□□ -0.91
LMO3-226ENST00000541589 ANKS1AQ92625 1134 aa9.38□□□□□ -0.91
LMO3-226ENST00000541589 DYNLL2Q96FJ2 89 aa9.38□□□□□ -0.91
LMO3-226ENST00000541589 ASB2Q96Q27 587 aa9.38□□□□□ -0.91
LMO3-226ENST00000541589 WDR18Q9BV38 432 aa9.38□□□□□ -0.91
LMO3-226ENST00000541589 SLC26A6Q9BXS9 759 aa9.38□□□□□ -0.91
LMO3-226ENST00000541589 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.38□□□□□ -0.91
LMO3-226ENST00000541589 PDLIM7Q9NR12 457 aa9.38□□□□□ -0.91
LMO3-226ENST00000541589 TFIP11Q9UBB9 837 aaKnown RBP9.38□□□□□ -0.91
LMO3-226ENST00000541589 ATP11BQ9Y2G3 1177 aa9.38□□□□□ -0.91
LMO3-226ENST00000541589 FOCADQ5VW36 1801 aa9.38□□□□□ -0.91
LMO3-226ENST00000541589 MYH15Q9Y2K3 1946 aa9.37□□□□□ -0.91
LMO3-226ENST00000541589 TRIM43BA6NCK2 446 aa9.37□□□□□ -0.91
LMO3-226ENST00000541589 LETM1O95202 739 aaPredicted RBP9.37□□□□□ -0.91
LMO3-226ENST00000541589 DEXIO95424 95 aa9.37□□□□□ -0.91
LMO3-226ENST00000541589 RASA1P20936 1047 aa9.37□□□□□ -0.91
LMO3-226ENST00000541589 PLCD1P51178 756 aa9.37□□□□□ -0.91
LMO3-226ENST00000541589 BACE1P56817 501 aa9.37□□□□□ -0.91
LMO3-226ENST00000541589 TROAPQ12815 778 aa9.37□□□□□ -0.91
LMO3-226ENST00000541589 MAP2K5Q13163 448 aa9.37□□□□□ -0.91
LMO3-226ENST00000541589 PICALMQ13492 652 aa9.37□□□□□ -0.91
LMO3-226ENST00000541589 SWT1Q5T5J6 900 aaKnown RBP9.37□□□□□ -0.91
LMO3-226ENST00000541589 CCDC183Q5T5S1 534 aa9.37□□□□□ -0.91
LMO3-226ENST00000541589 C1orf53Q5VUE5 145 aa9.37□□□□□ -0.91
LMO3-226ENST00000541589 KRT40Q6A162 431 aa9.37□□□□□ -0.91
LMO3-226ENST00000541589 SH3RF1Q7Z6J0 888 aa9.37□□□□□ -0.91
LMO3-226ENST00000541589 PLEKHH3Q7Z736 793 aa9.37□□□□□ -0.91
LMO3-226ENST00000541589 CTCFLQ8NI51 663 aaPredicted RBP9.37□□□□□ -0.91
LMO3-226ENST00000541589 ADAMTS19Q8TE59 1207 aa9.37□□□□□ -0.91
LMO3-226ENST00000541589 TRIM43Q96BQ3 446 aaPredicted RBP9.37□□□□□ -0.91
LMO3-226ENST00000541589 MAP3K14Q99558 947 aa9.37□□□□□ -0.91
LMO3-226ENST00000541589 RNF26Q9BY78 433 aaPredicted RBP9.37□□□□□ -0.91
LMO3-226ENST00000541589 RCOR1Q9UKL0 485 aa9.37□□□□□ -0.91
LMO3-226ENST00000541589 RLFQ13129 1914 aa9.37□□□□□ -0.91
LMO3-226ENST00000541589 GOLGA6L4A6NEF3 574 aa9.36□□□□□ -0.91
LMO3-226ENST00000541589 NMT2O60551 498 aa9.36□□□□□ -0.91
LMO3-226ENST00000541589 HOXC6P09630 235 aa9.36□□□□□ -0.91
LMO3-226ENST00000541589 TSPY3P0CV98 308 aa9.36□□□□□ -0.91
LMO3-226ENST00000541589 TSPY8P0CW00 308 aa9.36□□□□□ -0.91
LMO3-226ENST00000541589 ITGB8P26012 769 aa9.36□□□□□ -0.91
LMO3-226ENST00000541589 CDK8P49336 464 aa9.36□□□□□ -0.91
LMO3-226ENST00000541589 EPHB4P54760 987 aa9.36□□□□□ -0.91
LMO3-226ENST00000541589 MTMR2Q13614 643 aa9.36□□□□□ -0.91
LMO3-226ENST00000541589 HIC1Q14526 733 aa9.36□□□□□ -0.91
LMO3-226ENST00000541589 MFSD14CQ5VZR4 134 aa9.36□□□□□ -0.91
LMO3-226ENST00000541589 RCSD1Q6JBY9 416 aa9.36□□□□□ -0.91
LMO3-226ENST00000541589 TMTC3Q6ZXV5 915 aa9.36□□□□□ -0.91
LMO3-226ENST00000541589 GAS2L3Q86XJ1 694 aa9.36□□□□□ -0.91
LMO3-226ENST00000541589 TRPV1Q8NER1 839 aa9.36□□□□□ -0.91
LMO3-226ENST00000541589 AIFM3Q96NN9 605 aa9.36□□□□□ -0.91
LMO3-226ENST00000541589 USP28Q96RU2 1077 aa9.36□□□□□ -0.91
LMO3-226ENST00000541589 UHRF1Q96T88 793 aaPredicted RBP9.36□□□□□ -0.91
LMO3-226ENST00000541589 KAT14Q9H8E8 782 aa9.36□□□□□ -0.91
LMO3-226ENST00000541589 GRPEL1Q9HAV7 217 aa9.36□□□□□ -0.91
LMO3-226ENST00000541589 AS3MTQ9HBK9 375 aa9.36□□□□□ -0.91
LMO3-226ENST00000541589 RTEL1Q9NZ71 1219 aa9.36□□□□□ -0.91
LMO3-226ENST00000541589 TCHHQ07283 1943 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms