RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 PAG1Q9NWQ8 432 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 ARPP21Q9UBL0 812 aaPredicted RBP7.06□□□□□ -1.28
CPSF7-219ENST00000539952 ADD3Q9UEY8 706 aaKnown RBP7.06□□□□□ -1.28
CPSF7-219ENST00000539952 CTNNA3Q9UI47 895 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 TNNQ9UQP3 1299 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 EXOC6BQ9Y2D4 811 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 BDP1A6H8Y1 2624 aa7.06□□□□□ -1.28
CPSF7-219ENST00000539952 FAM86C2PA6NEL3 165 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 EPOPA6NHQ4 379 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 TMEM232C9JQI7 657 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 NKRFO15226 690 aaKnown RBP eCLIP7.05□□□□□ -1.28
CPSF7-219ENST00000539952 LPXNO60711 386 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 RAB11FIP3O75154 756 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 TTLL1O95922 423 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 ATP5JP18859 108 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 RASA1P20936 1047 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 SSTR3P32745 418 aaPredicted RBP7.05□□□□□ -1.28
CPSF7-219ENST00000539952 PPP4R3BQ5MIZ7 849 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 SLFN13Q68D06 897 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 KRT40Q6A162 431 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 CEP85Q6P2H3 762 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 FTSJ3Q8IY81 847 aaKnown RBP7.05□□□□□ -1.28
CPSF7-219ENST00000539952 CCDC155Q8N6L0 562 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 GMCL1P1Q8NEA9 526 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 MORC4Q8TE76 937 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 UIMC1Q96RL1 719 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 MPHOSPH6Q99547 160 aaKnown RBP7.05□□□□□ -1.28
CPSF7-219ENST00000539952 RAD9AQ99638 391 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 WDR11Q9BZH6 1224 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 UPF3BQ9BZI7 483 aaKnown RBP7.05□□□□□ -1.28
CPSF7-219ENST00000539952 BOLA2Q9H3K6 86 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 C1orf115Q9H7X2 142 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 UBE2ZQ9H832 354 aaPredicted RBP7.05□□□□□ -1.28
CPSF7-219ENST00000539952 IL1RAPL2Q9NP60 686 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 CD320Q9NPF0 282 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 PDGFCQ9NRA1 345 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 HOMER2Q9NSB8 354 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 RNF146Q9NTX7 359 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 TRMT13Q9NUP7 481 aaKnown RBP7.05□□□□□ -1.28
CPSF7-219ENST00000539952 MTMR4Q9NYA4 1195 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 FAM50BQ9Y247 325 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 MUC6Q6W4X9 2439 aa7.05□□□□□ -1.28
CPSF7-219ENST00000539952 MYO5AQ9Y4I1 1855 aaKnown RBP7.04□□□□□ -1.28
CPSF7-219ENST00000539952 A0A0G2JMZ2 1700 aa7.04□□□□□ -1.28
CPSF7-219ENST00000539952 IGKV6D-41A0A0C4DH26 115 aa7.04□□□□□ -1.28
CPSF7-219ENST00000539952 ABHD14A-ACY1A0A1B0GW23 586 aa7.04□□□□□ -1.28
CPSF7-219ENST00000539952 POTEB3A0JP26 581 aa7.04□□□□□ -1.28
CPSF7-219ENST00000539952 MINDY4BA8MYZ0 360 aa7.04□□□□□ -1.28
CPSF7-219ENST00000539952 B4DLN1 442 aa7.04□□□□□ -1.28
CPSF7-219ENST00000539952 EIF5BO60841 1220 aaKnown RBP7.04□□□□□ -1.28
CPSF7-219ENST00000539952 EFCAB14O75071 495 aa7.04□□□□□ -1.28
CPSF7-219ENST00000539952 MYL3P08590 195 aa7.04□□□□□ -1.28
CPSF7-219ENST00000539952 ALAS1P13196 640 aa7.04□□□□□ -1.28
CPSF7-219ENST00000539952 STAT2P52630 851 aa7.04□□□□□ -1.28
CPSF7-219ENST00000539952 MRPL12P52815 198 aaKnown RBP7.04□□□□□ -1.28
CPSF7-219ENST00000539952 ERVK-21P61565 698 aa7.04□□□□□ -1.28
CPSF7-219ENST00000539952 PURAQ00577 322 aaKnown RBP7.04□□□□□ -1.28
CPSF7-219ENST00000539952 NBPF20Q3BBV1 942 aa7.04□□□□□ -1.28
CPSF7-219ENST00000539952 C8orf34Q49A92 452 aa7.04□□□□□ -1.28
CPSF7-219ENST00000539952 FAM47CQ5HY64 1035 aa7.04□□□□□ -1.28
CPSF7-219ENST00000539952 RCSD1Q6JBY9 416 aa7.04□□□□□ -1.28
CPSF7-219ENST00000539952 POTEBQ6S5H4 581 aa7.04□□□□□ -1.28
CPSF7-219ENST00000539952 EEPD1Q7L9B9 569 aa7.04□□□□□ -1.28
CPSF7-219ENST00000539952 ITPRIPQ8IWB1 547 aa7.04□□□□□ -1.28
CPSF7-219ENST00000539952 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.04□□□□□ -1.28
CPSF7-219ENST00000539952 CAGE1Q8TC20 777 aa7.04□□□□□ -1.28
CPSF7-219ENST00000539952 MFSD14AQ96MC6 490 aa7.04□□□□□ -1.28
CPSF7-219ENST00000539952 TGS1Q96RS0 853 aaKnown RBP7.04□□□□□ -1.28
CPSF7-219ENST00000539952 STRBPQ96SI9 672 aaKnown RBP7.04□□□□□ -1.28
CPSF7-219ENST00000539952 HAUS7Q99871 368 aa7.04□□□□□ -1.28
CPSF7-219ENST00000539952 PUS7LQ9H0K6 701 aaKnown RBP7.04□□□□□ -1.28
CPSF7-219ENST00000539952 SUGCTQ9HAC7 445 aa7.04□□□□□ -1.28
CPSF7-219ENST00000539952 CYP39A1Q9NYL5 469 aa7.04□□□□□ -1.28
CPSF7-219ENST00000539952 PNMA2Q9UL42 364 aa7.04□□□□□ -1.28
CPSF7-219ENST00000539952 NOD1Q9Y239 953 aa7.04□□□□□ -1.28
CPSF7-219ENST00000539952 ZNF536O15090 1300 aa7.03□□□□□ -1.28
CPSF7-219ENST00000539952 RAD50Q92878 1312 aa7.03□□□□□ -1.28
CPSF7-219ENST00000539952 RBM47A0AV96 593 aaKnown RBP7.03□□□□□ -1.28
CPSF7-219ENST00000539952 A6NJR5 290 aa7.03□□□□□ -1.28
CPSF7-219ENST00000539952 GSG1L2A8MUP6 293 aa7.03□□□□□ -1.28
CPSF7-219ENST00000539952 PATL2C9JE40 543 aaKnown RBP7.03□□□□□ -1.28
CPSF7-219ENST00000539952 DCXO43602 365 aa7.03□□□□□ -1.28
CPSF7-219ENST00000539952 NCK2O43639 380 aa7.03□□□□□ -1.28
CPSF7-219ENST00000539952 HMMRO75330 724 aa7.03□□□□□ -1.28
CPSF7-219ENST00000539952 SLC3A2P08195 630 aaKnown RBP7.03□□□□□ -1.28
CPSF7-219ENST00000539952 HOXB3P14651 431 aaPredicted RBP7.03□□□□□ -1.28
CPSF7-219ENST00000539952 GNAT2P19087 354 aa7.03□□□□□ -1.28
CPSF7-219ENST00000539952 SLC1A4P43007 532 aa7.03□□□□□ -1.28
CPSF7-219ENST00000539952 NHLH1Q02575 133 aa7.03□□□□□ -1.28
CPSF7-219ENST00000539952 PDE4BQ07343 736 aa7.03□□□□□ -1.28
CPSF7-219ENST00000539952 IKQ13123 557 aaPredicted RBP7.03□□□□□ -1.28
CPSF7-219ENST00000539952 IKBKEQ14164 716 aa7.03□□□□□ -1.28
CPSF7-219ENST00000539952 PTPROQ16827 1216 aa7.03□□□□□ -1.28
CPSF7-219ENST00000539952 PTCRAQ6ISU1 281 aaPredicted RBP7.03□□□□□ -1.28
CPSF7-219ENST00000539952 LRRC47Q8N1G4 583 aaKnown RBP7.03□□□□□ -1.28
CPSF7-219ENST00000539952 NEDD1Q8NHV4 660 aa7.03□□□□□ -1.28
CPSF7-219ENST00000539952 AFAP1L1Q8TED9 768 aa7.03□□□□□ -1.28
CPSF7-219ENST00000539952 GMCL1Q96IK5 515 aa7.03□□□□□ -1.28
CPSF7-219ENST00000539952 FBXL18Q96ME1 805 aa7.03□□□□□ -1.28
CPSF7-219ENST00000539952 PRKAG3Q9UGI9 489 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms