RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 SCFD2Q8WU76 684 aa19.51■□□□□ 0.71
DDB1-215ENST00000539712 COPS5Q92905 334 aa19.51■□□□□ 0.71
DDB1-215ENST00000539712 PIGSQ96S52 555 aa19.51■□□□□ 0.71
DDB1-215ENST00000539712 RMDN3Q96TC7 470 aa19.51■□□□□ 0.71
DDB1-215ENST00000539712 MROH7Q68CQ1 1323 aa19.51■□□□□ 0.71
DDB1-215ENST00000539712 CDH23Q9H251 3354 aa19.5■□□□□ 0.71
DDB1-215ENST00000539712 ERICH2A1L162 156 aa19.5■□□□□ 0.71
DDB1-215ENST00000539712 SART3Q15020 963 aaKnown RBP19.5■□□□□ 0.71
DDB1-215ENST00000539712 IWS1Q96ST2 819 aa19.5■□□□□ 0.71
DDB1-215ENST00000539712 PCDHA1Q9Y5I3 950 aa19.5■□□□□ 0.71
DDB1-215ENST00000539712 A6NJR5 290 aa19.49■□□□□ 0.71
DDB1-215ENST00000539712 PRC1O43663 620 aa19.49■□□□□ 0.71
DDB1-215ENST00000539712 ZEB2O60315 1214 aa19.49■□□□□ 0.71
DDB1-215ENST00000539712 PURAQ00577 322 aaKnown RBP19.49■□□□□ 0.71
DDB1-215ENST00000539712 C16orf59Q7L2K0 433 aa19.49■□□□□ 0.71
DDB1-215ENST00000539712 CATIPQ7Z7H3 387 aa19.49■□□□□ 0.71
DDB1-215ENST00000539712 MPHOSPH6Q99547 160 aaKnown RBP19.49■□□□□ 0.71
DDB1-215ENST00000539712 MTA3Q9BTC8 594 aa19.49■□□□□ 0.71
DDB1-215ENST00000539712 PXMP2Q9NR77 195 aa19.49■□□□□ 0.71
DDB1-215ENST00000539712 CHD9Q3L8U1 2897 aa19.49■□□□□ 0.71
DDB1-215ENST00000539712 EYSQ5T1H1 3165 aa19.48■□□□□ 0.71
DDB1-215ENST00000539712 B4DLN1 442 aa19.48■□□□□ 0.71
DDB1-215ENST00000539712 SH2B2O14492 632 aaPredicted RBP19.48■□□□□ 0.71
DDB1-215ENST00000539712 NKRFO15226 690 aaKnown RBP eCLIP19.48■□□□□ 0.71
DDB1-215ENST00000539712 CFBP00751 764 aa19.48■□□□□ 0.71
DDB1-215ENST00000539712 TXNP10599 105 aaKnown RBP19.48■□□□□ 0.71
DDB1-215ENST00000539712 MRPL12P52815 198 aaKnown RBP19.48■□□□□ 0.71
DDB1-215ENST00000539712 FPGSQ05932 587 aa19.48■□□□□ 0.71
DDB1-215ENST00000539712 PPP2R5BQ15173 497 aa19.48■□□□□ 0.71
DDB1-215ENST00000539712 MFSD5Q6N075 450 aa19.48■□□□□ 0.71
DDB1-215ENST00000539712 HOMER1Q86YM7 354 aa19.48■□□□□ 0.71
DDB1-215ENST00000539712 ZNF654Q8IZM8 581 aa19.48■□□□□ 0.71
DDB1-215ENST00000539712 DEFB123Q8N688 67 aa19.48■□□□□ 0.71
DDB1-215ENST00000539712 OR6J1Q8NGC5 347 aa19.48■□□□□ 0.71
DDB1-215ENST00000539712 MAP3K14Q99558 947 aa19.48■□□□□ 0.71
DDB1-215ENST00000539712 MYL10Q9BUA6 226 aa19.48■□□□□ 0.71
DDB1-215ENST00000539712 TRPV6Q9H1D0 765 aa19.48■□□□□ 0.71
DDB1-215ENST00000539712 ANO2Q9NQ90 1003 aa19.48■□□□□ 0.71
DDB1-215ENST00000539712 PNMA6FA0A0J9YX94 578 aa19.47■□□□□ 0.71
DDB1-215ENST00000539712 EIF2AK2P19525 551 aaKnown RBP19.47■□□□□ 0.71
DDB1-215ENST00000539712 HOXA13P31271 388 aaPredicted RBP19.47■□□□□ 0.71
DDB1-215ENST00000539712 MCM5P33992 734 aa19.47■□□□□ 0.71
DDB1-215ENST00000539712 CPT1AP50416 773 aa19.47■□□□□ 0.71
DDB1-215ENST00000539712 MTMR10Q9NXD2 777 aa19.47■□□□□ 0.71
DDB1-215ENST00000539712 MAP3K20Q9NYL2 800 aaKnown RBP19.47■□□□□ 0.71
DDB1-215ENST00000539712 B4GALT4O60513 344 aa19.46■□□□□ 0.71
DDB1-215ENST00000539712 EIF3JO75822 258 aaKnown RBP19.46■□□□□ 0.71
DDB1-215ENST00000539712 RGS20O76081 388 aa19.46■□□□□ 0.71
DDB1-215ENST00000539712 DDAH1O94760 285 aa19.46■□□□□ 0.71
DDB1-215ENST00000539712 NR3C2P08235 984 aa19.46■□□□□ 0.71
DDB1-215ENST00000539712 TTLL4Q14679 1199 aa19.46■□□□□ 0.71
DDB1-215ENST00000539712 STXBP2Q15833 593 aa19.46■□□□□ 0.71
DDB1-215ENST00000539712 LY6KQ17RY6 165 aa19.46■□□□□ 0.71
DDB1-215ENST00000539712 ARHGEF16Q5VV41 709 aa19.46■□□□□ 0.71
DDB1-215ENST00000539712 FAM109BQ6ICB4 259 aaPredicted RBP19.46■□□□□ 0.71
DDB1-215ENST00000539712 SEPT14Q6ZU15 432 aa19.46■□□□□ 0.71
DDB1-215ENST00000539712 SEZ6LQ9BYH1 1024 aa19.46■□□□□ 0.71
DDB1-215ENST00000539712 POLR3EQ9NVU0 708 aa19.46■□□□□ 0.71
DDB1-215ENST00000539712 SCN10AQ9Y5Y9 1956 aa19.46■□□□□ 0.71
DDB1-215ENST00000539712 UMODL1Q5DID0 1318 aa19.46■□□□□ 0.71
DDB1-215ENST00000539712 TLR3O15455 904 aaKnown RBP19.45■□□□□ 0.7
DDB1-215ENST00000539712 MYL3P08590 195 aa19.45■□□□□ 0.7
DDB1-215ENST00000539712 CYP2C18P33260 490 aa19.45■□□□□ 0.7
DDB1-215ENST00000539712 LIFRP42702 1097 aa19.45■□□□□ 0.7
DDB1-215ENST00000539712 ARHGAP1Q07960 439 aa19.45■□□□□ 0.7
DDB1-215ENST00000539712 VSIG10LQ86VR7 867 aa19.45■□□□□ 0.7
DDB1-215ENST00000539712 RASEFQ8IZ41 740 aa19.45■□□□□ 0.7
DDB1-215ENST00000539712 SAMD3Q8N6K7 520 aa19.45■□□□□ 0.7
DDB1-215ENST00000539712 IL31RAQ8NI17 732 aa19.45■□□□□ 0.7
DDB1-215ENST00000539712 TMEM87BQ96K49 555 aa19.45■□□□□ 0.7
DDB1-215ENST00000539712 PDCD2LQ9BRP1 358 aa19.45■□□□□ 0.7
DDB1-215ENST00000539712 MTG1Q9BT17 334 aaPredicted RBP19.45■□□□□ 0.7
DDB1-215ENST00000539712 SPZ1Q9BXG8 430 aa19.45■□□□□ 0.7
DDB1-215ENST00000539712 PPP1R12CQ9BZL4 782 aa19.45■□□□□ 0.7
DDB1-215ENST00000539712 ALDH8A1Q9H2A2 487 aaPredicted RBP19.45■□□□□ 0.7
DDB1-215ENST00000539712 DDX41Q9UJV9 622 aaKnown RBP19.45■□□□□ 0.7
DDB1-215ENST00000539712 KIAA1217Q5T5P2 1943 aa19.45■□□□□ 0.7
DDB1-215ENST00000539712 PLEKHA8P1O95397 391 aa19.44■□□□□ 0.7
DDB1-215ENST00000539712 CSF2RAP15509 400 aa19.44■□□□□ 0.7
DDB1-215ENST00000539712 SMARCA1P28370 1054 aa19.44■□□□□ 0.7
DDB1-215ENST00000539712 CASC1Q6TDU7 716 aa19.44■□□□□ 0.7
DDB1-215ENST00000539712 TMTC2Q8N394 836 aa19.44■□□□□ 0.7
DDB1-215ENST00000539712 SRBD1Q8N5C6 995 aaKnown RBP19.44■□□□□ 0.7
DDB1-215ENST00000539712 PPP1R13LQ8WUF5 828 aa19.44■□□□□ 0.7
DDB1-215ENST00000539712 AFG1LQ8WV93 481 aa19.44■□□□□ 0.7
DDB1-215ENST00000539712 PIBF1Q8WXW3 757 aa19.44■□□□□ 0.7
DDB1-215ENST00000539712 VWCEQ96DN2 955 aa19.44■□□□□ 0.7
DDB1-215ENST00000539712 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.44■□□□□ 0.76e-14■□□□□ 9.9
DDB1-215ENST00000539712 NOC4LQ9BVI4 516 aaKnown RBP19.44■□□□□ 0.7
DDB1-215ENST00000539712 LRRC2Q9BYS8 371 aa19.44■□□□□ 0.7
DDB1-215ENST00000539712 TRMT13Q9NUP7 481 aaKnown RBP19.44■□□□□ 0.7
DDB1-215ENST00000539712 PRUNE2Q8WUY3 3088 aa19.43■□□□□ 0.7
DDB1-215ENST00000539712 RXRAP19793 462 aa19.43■□□□□ 0.7
DDB1-215ENST00000539712 EXOSC10Q01780 885 aaKnown RBP19.43■□□□□ 0.7
DDB1-215ENST00000539712 NBPF20Q3BBV1 942 aa19.43■□□□□ 0.7
DDB1-215ENST00000539712 TSGA10IPQ3SY00 556 aa19.43■□□□□ 0.7
DDB1-215ENST00000539712 TMEM240Q5SV17 173 aa19.43■□□□□ 0.7
DDB1-215ENST00000539712 RASIP1Q5U651 963 aa19.43■□□□□ 0.7
DDB1-215ENST00000539712 UNC80Q8N2C7 3258 aa19.42■□□□□ 0.7
DDB1-215ENST00000539712 GCOM1H8Y6P7 765 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms