RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 DNAH12Q6ZR08 3092 aa18.14■□□□□ 0.49
CIT-210ENST00000539413 EIF2AK2P19525 551 aaKnown RBP18.14■□□□□ 0.49
CIT-210ENST00000539413 HOXA13P31271 388 aaPredicted RBP18.14■□□□□ 0.49
CIT-210ENST00000539413 TLE2Q04725 743 aa18.14■□□□□ 0.49
CIT-210ENST00000539413 FSCN1Q16658 493 aaKnown RBP18.14■□□□□ 0.49
CIT-210ENST00000539413 ARHGEF16Q5VV41 709 aa18.14■□□□□ 0.49
CIT-210ENST00000539413 FANCBQ8NB91 859 aa18.14■□□□□ 0.49
CIT-210ENST00000539413 RRP36Q96EU6 259 aaKnown RBP18.14■□□□□ 0.49
CIT-210ENST00000539413 GLT1D1Q96MS3 346 aa18.14■□□□□ 0.49
CIT-210ENST00000539413 JAKMIP1Q96N16 626 aaKnown RBP18.14■□□□□ 0.49
CIT-210ENST00000539413 BRPF3Q9ULD4 1205 aa18.14■□□□□ 0.49
CIT-210ENST00000539413 Q9Y3F1 56 aa18.14■□□□□ 0.49
CIT-210ENST00000539413 HMGB1P09429 215 aaKnown RBP18.13■□□□□ 0.49
CIT-210ENST00000539413 MDM2Q00987 491 aaPredicted RBP18.13■□□□□ 0.49
CIT-210ENST00000539413 APOA5Q6Q788 366 aa18.13■□□□□ 0.49
CIT-210ENST00000539413 SYNE3Q6ZMZ3 975 aa18.13■□□□□ 0.49
CIT-210ENST00000539413 SCFD2Q8WU76 684 aa18.13■□□□□ 0.49
CIT-210ENST00000539413 IWS1Q96ST2 819 aa18.13■□□□□ 0.49
CIT-210ENST00000539413 PRDM5Q9NQX1 630 aaPredicted RBP18.13■□□□□ 0.49
CIT-210ENST00000539413 PXMP2Q9NR77 195 aa18.13■□□□□ 0.49
CIT-210ENST00000539413 MAP3K20Q9NYL2 800 aaKnown RBP18.13■□□□□ 0.49
CIT-210ENST00000539413 GCOM1H8Y6P7 765 aaPredicted RBP18.12■□□□□ 0.49
CIT-210ENST00000539413 PQBP1O60828 265 aaKnown RBP18.12■□□□□ 0.49
CIT-210ENST00000539413 ARIH2O95376 493 aa18.12■□□□□ 0.49
CIT-210ENST00000539413 POLR2MP0CAP2 368 aa18.12■□□□□ 0.49
CIT-210ENST00000539413 BMP8BP34820 402 aa18.12■□□□□ 0.49
CIT-210ENST00000539413 PPP2R5BQ15173 497 aa18.12■□□□□ 0.49
CIT-210ENST00000539413 STXBP2Q15833 593 aa18.12■□□□□ 0.49
CIT-210ENST00000539413 CXCL17Q6UXB2 119 aa18.12■□□□□ 0.49
CIT-210ENST00000539413 TMTC3Q6ZXV5 915 aa18.12■□□□□ 0.49
CIT-210ENST00000539413 SH3RF1Q7Z6J0 888 aa18.12■□□□□ 0.49
CIT-210ENST00000539413 CCDC82Q8N4S0 544 aa18.12■□□□□ 0.49
CIT-210ENST00000539413 SAMD3Q8N6K7 520 aa18.12■□□□□ 0.49
CIT-210ENST00000539413 COPS5Q92905 334 aa18.12■□□□□ 0.49
CIT-210ENST00000539413 VTI1AQ96AJ9 217 aa18.12■□□□□ 0.49
CIT-210ENST00000539413 PDLIM7Q9NR12 457 aa18.12■□□□□ 0.49
CIT-210ENST00000539413 PRKAG2Q9UGJ0 569 aa18.12■□□□□ 0.49
CIT-210ENST00000539413 SEC63Q9UGP8 760 aaKnown RBP18.12■□□□□ 0.49
CIT-210ENST00000539413 ELP1O95163 1332 aa18.12■□□□□ 0.49
CIT-210ENST00000539413 KLF18A0A0U1RQI7 1052 aa18.11■□□□□ 0.49
CIT-210ENST00000539413 hCG_1642624A0A1W2PR95 340 aa18.11■□□□□ 0.49
CIT-210ENST00000539413 NR3C2P08235 984 aa18.11■□□□□ 0.49
CIT-210ENST00000539413 TXNP10599 105 aaKnown RBP18.11■□□□□ 0.49
CIT-210ENST00000539413 BLOC1S2Q6QNY1 142 aa18.11■□□□□ 0.49
CIT-210ENST00000539413 SEPT14Q6ZU15 432 aa18.11■□□□□ 0.49
CIT-210ENST00000539413 OR6J1Q8NGC5 347 aa18.11■□□□□ 0.49
CIT-210ENST00000539413 PDCD2LQ9BRP1 358 aa18.11■□□□□ 0.49
CIT-210ENST00000539413 TRIM43BA6NCK2 446 aa18.1■□□□□ 0.49
CIT-210ENST00000539413 ZBTB43O43298 467 aa18.1■□□□□ 0.49
CIT-210ENST00000539413 CDK7P50613 346 aa18.1■□□□□ 0.49
CIT-210ENST00000539413 TTLL4Q14679 1199 aa18.1■□□□□ 0.49
CIT-210ENST00000539413 CCDC62Q6P9F0 684 aa18.1■□□□□ 0.49
CIT-210ENST00000539413 Q6ZUG5 572 aa18.1■□□□□ 0.49
CIT-210ENST00000539413 ANKRD33Q7Z3H0 272 aa18.1■□□□□ 0.49
CIT-210ENST00000539413 FCHSD1Q86WN1 690 aa18.1■□□□□ 0.49
CIT-210ENST00000539413 TRIM43Q96BQ3 446 aaPredicted RBP18.1■□□□□ 0.49
CIT-210ENST00000539413 LTBP2Q14767 1821 aa18.09■□□□□ 0.49
CIT-210ENST00000539413 A0A0U1RQG5 324 aaPredicted RBP18.09■□□□□ 0.49
CIT-210ENST00000539413 ARVCFO00192 962 aa18.09■□□□□ 0.49
CIT-210ENST00000539413 NKRFO15226 690 aaKnown RBP eCLIP18.09■□□□□ 0.49
CIT-210ENST00000539413 EPB41L2O43491 1005 aaKnown RBP18.09■□□□□ 0.49
CIT-210ENST00000539413 ZEB2O60315 1214 aa18.09■□□□□ 0.49
CIT-210ENST00000539413 EIF3JO75822 258 aaKnown RBP18.09■□□□□ 0.49
CIT-210ENST00000539413 CLTBP09497 229 aa18.09■□□□□ 0.49
CIT-210ENST00000539413 MYCLP12524 364 aaPredicted RBP18.09■□□□□ 0.49
CIT-210ENST00000539413 FXR1P51114 621 aaKnown RBP eCLIP18.09■□□□□ 0.49
CIT-210ENST00000539413 FGD1P98174 961 aa18.09■□□□□ 0.49
CIT-210ENST00000539413 FAAP100Q0VG06 881 aa18.09■□□□□ 0.49
CIT-210ENST00000539413 PGM5Q15124 567 aa18.09■□□□□ 0.49
CIT-210ENST00000539413 RTN1Q16799 776 aa18.09■□□□□ 0.49
CIT-210ENST00000539413 IL31RAQ8NI17 732 aa18.09■□□□□ 0.49
CIT-210ENST00000539413 TOX2Q96NM4 488 aa18.09■□□□□ 0.49
CIT-210ENST00000539413 LBHD1Q9BQE6 289 aaPredicted RBP18.09■□□□□ 0.49
CIT-210ENST00000539413 USP26Q9BXU7 913 aa18.09■□□□□ 0.49
CIT-210ENST00000539413 UBE2OQ9C0C9 1292 aaKnown RBP18.09■□□□□ 0.49
CIT-210ENST00000539413 RBM28Q9NW13 759 aaKnown RBP18.09■□□□□ 0.49
CIT-210ENST00000539413 CNTNAP5Q8WYK1 1306 aa18.08■□□□□ 0.49
CIT-210ENST00000539413 A0A1W2PPC1 479 aa18.08■□□□□ 0.48
CIT-210ENST00000539413 GOLGA8AA7E2F4 631 aa18.08■□□□□ 0.48
CIT-210ENST00000539413 GOLGA8BA8MQT2 603 aa18.08■□□□□ 0.48
CIT-210ENST00000539413 CABYRO75952 493 aa18.08■□□□□ 0.48
CIT-210ENST00000539413 RPS6KB1P23443 525 aa18.08■□□□□ 0.48
CIT-210ENST00000539413 CPT1AP50416 773 aa18.08■□□□□ 0.48
CIT-210ENST00000539413 APOBRQ0VD83 1088 aa18.08■□□□□ 0.48
CIT-210ENST00000539413 LY6KQ17RY6 165 aa18.08■□□□□ 0.48
CIT-210ENST00000539413 BRF1Q92994 677 aa18.08■□□□□ 0.48
CIT-210ENST00000539413 ZFP91Q96JP5 570 aaPredicted RBP18.08■□□□□ 0.48
CIT-210ENST00000539413 FAM217BQ9NTX9 383 aaPredicted RBP18.08■□□□□ 0.48
CIT-210ENST00000539413 NAP1L2Q9ULW6 460 aaPredicted RBP18.08■□□□□ 0.48
CIT-210ENST00000539413 BAZ2BQ9UIF8 2168 aaKnown RBP18.07■□□□□ 0.48
CIT-210ENST00000539413 GRIN2DO15399 1336 aa18.07■□□□□ 0.48
CIT-210ENST00000539413 MROH7Q68CQ1 1323 aa18.07■□□□□ 0.48
CIT-210ENST00000539413 DCDC2CA8MYV0 355 aa18.07■□□□□ 0.48
CIT-210ENST00000539413 MYL3P08590 195 aa18.07■□□□□ 0.48
CIT-210ENST00000539413 CASTP20810 708 aaKnown RBP18.07■□□□□ 0.48
CIT-210ENST00000539413 ITGB8P26012 769 aa18.07■□□□□ 0.48
CIT-210ENST00000539413 PSMA5P28066 241 aa18.07■□□□□ 0.48
CIT-210ENST00000539413 CDC27P30260 824 aa18.07■□□□□ 0.48
CIT-210ENST00000539413 PSMC6P62333 389 aa18.07■□□□□ 0.48
CIT-210ENST00000539413 FUT2Q10981 343 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms