RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 DRC3Q9H069 523 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 IFT122Q9HBG6 1241 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 AS3MTQ9HBK9 375 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 USP40Q9NVE5 1235 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 ANAPC5Q9UJX4 755 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 ZRANB2O95218 330 aaKnown RBP eCLIP10.81□□□□□ -0.68
COL4A6-208ENST00000538570 EEF1GP26641 437 aaKnown RBP10.81□□□□□ -0.68
COL4A6-208ENST00000538570 LONP1P36776 959 aaKnown RBP10.81□□□□□ -0.68
COL4A6-208ENST00000538570 MYL7Q01449 175 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 RASSF7Q02833 373 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 EHHADHQ08426 723 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 RCN2Q14257 317 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 EXOC3L4Q17RC7 722 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 KCTD16Q68DU8 428 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 PSPC1Q8WXF1 523 aaKnown RBP10.81□□□□□ -0.68
COL4A6-208ENST00000538570 PPP1R13BQ96KQ4 1090 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 BTG4Q9NY30 223 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 ARIH1Q9Y4X5 557 aaPredicted RBP10.81□□□□□ -0.68
COL4A6-208ENST00000538570 ORC6Q9Y5N6 252 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 PALM3A6NDB9 673 aaPredicted RBP10.81□□□□□ -0.68
COL4A6-208ENST00000538570 SGK1O00141 431 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 APOEP02649 317 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 A1BGP04217 495 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 TMEM191BP0C7N4 346 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 IL13P35225 146 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 PDE1BQ01064 536 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 NAA35Q5VZE5 725 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 C4orf50Q6ZRC1 276 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 GAS2L3Q86XJ1 694 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 RFX6Q8HWS3 928 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 ZNF710Q8N1W2 664 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 ACTR5Q9H9F9 607 aaPredicted RBP10.81□□□□□ -0.68
COL4A6-208ENST00000538570 FBXO2Q9UK22 296 aaPredicted RBP10.81□□□□□ -0.68
COL4A6-208ENST00000538570 ZNF827Q17R98 1081 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 FANCBQ8NB91 859 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 MAGEF1Q9HAY2 307 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 CHCHD3Q9NX63 227 aaKnown RBP10.81□□□□□ -0.68
COL4A6-208ENST00000538570 CDC23Q9UJX2 597 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 CFAP43Q8NDM7 1665 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 SCG2P13521 617 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 MFAP3P55082 362 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 PRKG1Q13976 671 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 DLGAP5Q15398 846 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 STK32BQ9NY57 414 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 PER1O15534 1290 aaPredicted RBP10.8□□□□□ -0.68
COL4A6-208ENST00000538570 DDAH1O94760 285 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 KRT10P13645 584 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 NDUFA8P51970 172 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 IFNL3Q8IZI9 196 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 SKA2Q8WVK7 121 aaPredicted RBP10.8□□□□□ -0.68
COL4A6-208ENST00000538570 SMYD2Q9NRG4 433 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 EIF4G3O43432 1585 aaKnown RBP10.8□□□□□ -0.68
COL4A6-208ENST00000538570 USP17L12C9JPN9 530 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 USP17L21D6R901 530 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 SRGAP2BP0DMP2 458 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 BPIFB4P59827 614 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 TMTC4Q5T4D3 741 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 FBXO18Q8NFZ0 1043 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 CNOT6LQ96LI5 555 aaKnown RBP10.8□□□□□ -0.68
COL4A6-208ENST00000538570 SLC5A4Q9NY91 659 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 PCDHA7Q9UN72 937 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 IFNAR2P48551 515 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 EPHB4P54760 987 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 PTK2Q05397 1052 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 FAM26FQ5R3K3 315 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 TADA2BQ86TJ2 420 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 SYMPKQ92797 1274 aaKnown RBP10.8□□□□□ -0.68
COL4A6-208ENST00000538570 MAGOHBQ96A72 148 aaKnown RBP10.8□□□□□ -0.68
COL4A6-208ENST00000538570 MTMR6Q9Y217 621 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 DISP1Q96F81 1524 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 GNGT2O14610 69 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 RSBN1LQ6PCB5 846 aaPredicted RBP10.8□□□□□ -0.68
COL4A6-208ENST00000538570 KRT26Q7Z3Y9 468 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 MCF2L2Q86YR7 1114 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 SCYL3Q8IZE3 742 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 CEP70Q8NHQ1 597 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 SPC25Q9HBM1 224 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 ZSWIM6Q9HCJ5 1215 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 ANGPTL3Q9Y5C1 460 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 MED23Q9ULK4 1368 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 ESRRGP62508 458 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 MESDQ14696 234 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 TRIM11Q96F44 468 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 CENPKQ9BS16 269 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 TPCN1Q9ULQ1 816 aa10.8□□□□□ -0.68
COL4A6-208ENST00000538570 IFRD2Q12894 506 aaPredicted RBP10.79□□□□□ -0.68
COL4A6-208ENST00000538570 DTNBP1Q96EV8 351 aa10.79□□□□□ -0.68
COL4A6-208ENST00000538570 CLIC6Q96NY7 704 aa10.79□□□□□ -0.68
COL4A6-208ENST00000538570 EIF2AQ9BY44 585 aaKnown RBP10.79□□□□□ -0.68
COL4A6-208ENST00000538570 KAT6BQ8WYB5 2073 aa10.79□□□□□ -0.68
COL4A6-208ENST00000538570 PZPP20742 1482 aa10.79□□□□□ -0.68
COL4A6-208ENST00000538570 BLVRAP53004 296 aa10.79□□□□□ -0.68
COL4A6-208ENST00000538570 CDR2Q01850 454 aa10.79□□□□□ -0.68
COL4A6-208ENST00000538570 FBXO11Q86XK2 927 aa10.79□□□□□ -0.68
COL4A6-208ENST00000538570 SLC35F6Q8N357 371 aa10.79□□□□□ -0.68
COL4A6-208ENST00000538570 DCLK2Q8N568 766 aa10.79□□□□□ -0.68
COL4A6-208ENST00000538570 CCDC127Q96BQ5 260 aa10.79□□□□□ -0.68
COL4A6-208ENST00000538570 MYO1FO00160 1098 aa10.79□□□□□ -0.68
COL4A6-208ENST00000538570 SKIP12755 728 aa10.79□□□□□ -0.68
COL4A6-208ENST00000538570 ANKRD35Q8N283 1001 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms