RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 PNMA3Q9UL41 463 aa23.44■■□□□ 1.34
COPS7A-208ENST00000538410 CEP131Q9UPN4 1083 aa23.44■■□□□ 1.34
COPS7A-208ENST00000538410 ECM2O94769 699 aaPredicted RBP23.43■■□□□ 1.34
COPS7A-208ENST00000538410 HOXA13P31271 388 aaPredicted RBP23.43■■□□□ 1.34
COPS7A-208ENST00000538410 STAT3P40763 770 aa23.43■■□□□ 1.34
COPS7A-208ENST00000538410 GHRHRQ02643 423 aa23.43■■□□□ 1.34
COPS7A-208ENST00000538410 TKFCQ3LXA3 575 aa23.43■■□□□ 1.34
COPS7A-208ENST00000538410 MUM1L1Q5H9M0 696 aa23.43■■□□□ 1.34
COPS7A-208ENST00000538410 NEK8Q86SG6 692 aa23.43■■□□□ 1.34
COPS7A-208ENST00000538410 MCF2L2Q86YR7 1114 aa23.43■■□□□ 1.34
COPS7A-208ENST00000538410 ANO3Q9BYT9 981 aa23.43■■□□□ 1.34
COPS7A-208ENST00000538410 HOMER2Q9NSB8 354 aa23.43■■□□□ 1.34
COPS7A-208ENST00000538410 RIPK3Q9Y572 518 aa23.43■■□□□ 1.34
COPS7A-208ENST00000538410 NFIBO00712 420 aa23.42■■□□□ 1.34
COPS7A-208ENST00000538410 BCRP11274 1271 aa23.42■■□□□ 1.34
COPS7A-208ENST00000538410 PSMC4P43686 418 aa23.42■■□□□ 1.34
COPS7A-208ENST00000538410 UBE2HP62256 183 aa23.42■■□□□ 1.34
COPS7A-208ENST00000538410 ZNF174Q15697 407 aa23.42■■□□□ 1.34
COPS7A-208ENST00000538410 SAMD3Q8N6K7 520 aa23.42■■□□□ 1.34
COPS7A-208ENST00000538410 SMCR8Q8TEV9 937 aaPredicted RBP23.42■■□□□ 1.34
COPS7A-208ENST00000538410 RNF146Q9NTX7 359 aa23.42■■□□□ 1.34
COPS7A-208ENST00000538410 BTBD7Q9P203 1132 aa23.42■■□□□ 1.34
COPS7A-208ENST00000538410 SPDYE3A6NKU9 549 aa23.41■■□□□ 1.34
COPS7A-208ENST00000538410 PPP6R2O75170 966 aa23.41■■□□□ 1.34
COPS7A-208ENST00000538410 BMP15O95972 392 aa23.41■■□□□ 1.34
COPS7A-208ENST00000538410 HSD17B4P51659 736 aa23.41■■□□□ 1.34
COPS7A-208ENST00000538410 PLS1Q14651 629 aa23.41■■□□□ 1.34
COPS7A-208ENST00000538410 PTCH2Q9Y6C5 1203 aa23.41■■□□□ 1.34
COPS7A-208ENST00000538410 MGAMO43451 1857 aa23.41■■□□□ 1.34
COPS7A-208ENST00000538410 PRMT2P55345 433 aa23.41■■□□□ 1.34
COPS7A-208ENST00000538410 MAP3K20Q9NYL2 800 aaKnown RBP23.41■■□□□ 1.34
COPS7A-208ENST00000538410 PCDHA7Q9UN72 937 aa23.41■■□□□ 1.34
COPS7A-208ENST00000538410 MORC2Q9Y6X9 1032 aaPredicted RBP23.41■■□□□ 1.34
COPS7A-208ENST00000538410 CNMDO75829 334 aa23.4■■□□□ 1.34
COPS7A-208ENST00000538410 HOXD10P28358 340 aa23.4■■□□□ 1.34
COPS7A-208ENST00000538410 CTGFP29279 349 aa23.4■■□□□ 1.34
COPS7A-208ENST00000538410 MCM7P33993 719 aa23.4■■□□□ 1.34
COPS7A-208ENST00000538410 ME1P48163 572 aa23.4■■□□□ 1.34
COPS7A-208ENST00000538410 SKOR2Q2VWA4 1001 aaPredicted RBP23.4■■□□□ 1.34
COPS7A-208ENST00000538410 LETM2Q2VYF4 491 aa23.4■■□□□ 1.34
COPS7A-208ENST00000538410 GTF3C2Q8WUA4 911 aaPredicted RBP23.4■■□□□ 1.34
COPS7A-208ENST00000538410 GOLGA6L4A6NEF3 574 aa23.39■■□□□ 1.33
COPS7A-208ENST00000538410 EDIL3O43854 480 aa23.39■■□□□ 1.33
COPS7A-208ENST00000538410 TRAK2O60296 914 aa23.39■■□□□ 1.33
COPS7A-208ENST00000538410 MARCKSP29966 332 aaPredicted RBP23.39■■□□□ 1.33
COPS7A-208ENST00000538410 FCHSD1Q86WN1 690 aa23.39■■□□□ 1.33
COPS7A-208ENST00000538410 RIOX2Q8IUF8 465 aa23.39■■□□□ 1.33
COPS7A-208ENST00000538410 ARMC5Q96C12 935 aa23.39■■□□□ 1.33
COPS7A-208ENST00000538410 TRIM47Q96LD4 638 aa23.39■■□□□ 1.33
COPS7A-208ENST00000538410 PAGR1Q9BTK6 254 aa23.39■■□□□ 1.33
COPS7A-208ENST00000538410 SPATC1LQ9H0A9 340 aa23.39■■□□□ 1.33
COPS7A-208ENST00000538410 RBPJLQ9UBG7 517 aa23.39■■□□□ 1.33
COPS7A-208ENST00000538410 RABGAP1Q9Y3P9 1069 aa23.39■■□□□ 1.33
COPS7A-208ENST00000538410 CCNT1O60563 726 aaKnown RBP23.38■■□□□ 1.33
COPS7A-208ENST00000538410 PEX10O60683 326 aa23.38■■□□□ 1.33
COPS7A-208ENST00000538410 ORC2Q13416 577 aaPredicted RBP23.38■■□□□ 1.33
COPS7A-208ENST00000538410 SLC9C1Q4G0N8 1177 aa23.38■■□□□ 1.33
COPS7A-208ENST00000538410 GPT2Q8TD30 523 aa23.38■■□□□ 1.33
COPS7A-208ENST00000538410 MAF1Q9H063 256 aa23.38■■□□□ 1.33
COPS7A-208ENST00000538410 ACAD9Q9H845 621 aa23.38■■□□□ 1.33
COPS7A-208ENST00000538410 DDX49Q9Y6V7 483 aaKnown RBP23.38■■□□□ 1.33
COPS7A-208ENST00000538410 LCTP09848 1927 aa23.38■■□□□ 1.33
COPS7A-208ENST00000538410 MBD3O95983 291 aa23.37■■□□□ 1.33
COPS7A-208ENST00000538410 SREBF1P36956 1147 aa23.37■■□□□ 1.33
COPS7A-208ENST00000538410 USP11P51784 963 aa23.37■■□□□ 1.33
COPS7A-208ENST00000538410 FCGRTP55899 365 aa23.37■■□□□ 1.33
COPS7A-208ENST00000538410 ATP2C1P98194 919 aaPredicted RBP23.37■■□□□ 1.33
COPS7A-208ENST00000538410 PTGDRQ13258 359 aa23.37■■□□□ 1.33
COPS7A-208ENST00000538410 ADALQ6DHV7 355 aa23.37■■□□□ 1.33
COPS7A-208ENST00000538410 CHST13Q8NET6 341 aa23.37■■□□□ 1.33
COPS7A-208ENST00000538410 CRYGNQ8WXF5 182 aa23.37■■□□□ 1.33
COPS7A-208ENST00000538410 SRRDQ9UH36 339 aa23.37■■□□□ 1.33
COPS7A-208ENST00000538410 ZNFX1Q9P2E3 1918 aaKnown RBP23.37■■□□□ 1.33
COPS7A-208ENST00000538410 TPRNQ4KMQ1 711 aa23.37■■□□□ 1.33
COPS7A-208ENST00000538410 PPP4R3AQ6IN85 833 aa23.37■■□□□ 1.33
COPS7A-208ENST00000538410 RNF207Q6ZRF8 634 aa23.37■■□□□ 1.33
COPS7A-208ENST00000538410 C4orf32Q8N8J7 132 aa23.37■■□□□ 1.33
COPS7A-208ENST00000538410 NAP1L4Q99733 375 aaKnown RBP23.37■■□□□ 1.33
COPS7A-208ENST00000538410 EHMT1Q9H9B1 1298 aa23.37■■□□□ 1.33
COPS7A-208ENST00000538410 TXNRD2Q9NNW7 524 aa23.37■■□□□ 1.33
COPS7A-208ENST00000538410 MRVI1Q9Y6F6 885 aa23.37■■□□□ 1.33
COPS7A-208ENST00000538410 RPS6P62753 249 aaKnown RBP23.36■■□□□ 1.33
COPS7A-208ENST00000538410 ARHGAP4P98171 946 aa23.36■■□□□ 1.33
COPS7A-208ENST00000538410 KLHL40Q2TBA0 621 aa23.36■■□□□ 1.33
COPS7A-208ENST00000538410 AXDND1Q5T1B0 1012 aaPredicted RBP23.36■■□□□ 1.33
COPS7A-208ENST00000538410 NSMFQ6X4W1 530 aa23.36■■□□□ 1.33
COPS7A-208ENST00000538410 ANKRD13CQ8N6S4 541 aa23.36■■□□□ 1.33
COPS7A-208ENST00000538410 KRI1Q8N9T8 703 aaKnown RBP23.36■■□□□ 1.33
COPS7A-208ENST00000538410 FBXO2Q9UK22 296 aaPredicted RBP23.36■■□□□ 1.33
COPS7A-208ENST00000538410 HTTP42858 3142 aa23.35■■□□□ 1.33
COPS7A-208ENST00000538410 CUTAO60888 179 aa23.35■■□□□ 1.33
COPS7A-208ENST00000538410 PTPREP23469 700 aa23.35■■□□□ 1.33
COPS7A-208ENST00000538410 SLC30A10Q6XR72 485 aa23.35■■□□□ 1.33
COPS7A-208ENST00000538410 SYTL5Q8TDW5 730 aaPredicted RBP23.35■■□□□ 1.33
COPS7A-208ENST00000538410 MOV10L1Q9BXT6 1211 aaKnown RBP23.35■■□□□ 1.33
COPS7A-208ENST00000538410 COL20A1Q9P218 1284 aa23.35■■□□□ 1.33
COPS7A-208ENST00000538410 FBXO40Q9UH90 709 aa23.35■■□□□ 1.33
COPS7A-208ENST00000538410 SRPRBQ9Y5M8 271 aaKnown RBP23.35■■□□□ 1.33
COPS7A-208ENST00000538410 A0A1W2PQ27 194 aa23.34■■□□□ 1.33
COPS7A-208ENST00000538410 A0A1W2PQ64 194 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms