RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 CNNM4Q6P4Q7 775 aa10.38□□□□□ -0.75
DDB1-211ENST00000538280 DPP8Q6V1X1 898 aaPredicted RBP10.38□□□□□ -0.75
DDB1-211ENST00000538280 HOMER1Q86YM7 354 aa10.38□□□□□ -0.75
DDB1-211ENST00000538280 REXO1Q8N1G1 1221 aaKnown RBP10.38□□□□□ -0.75
DDB1-211ENST00000538280 ZNF507Q8TCN5 953 aa10.38□□□□□ -0.75
DDB1-211ENST00000538280 TBCKQ8TEA7 893 aa10.38□□□□□ -0.75
DDB1-211ENST00000538280 DHTKD1Q96HY7 919 aaPredicted RBP10.38□□□□□ -0.75
DDB1-211ENST00000538280 BEGAINQ9BUH8 593 aa10.38□□□□□ -0.75
DDB1-211ENST00000538280 TRIM9Q9C026 710 aa10.38□□□□□ -0.75
DDB1-211ENST00000538280 ZC3H12CQ9C0D7 883 aaKnown RBP10.38□□□□□ -0.75
DDB1-211ENST00000538280 MRPL44Q9H9J2 332 aaKnown RBP10.38□□□□□ -0.75
DDB1-211ENST00000538280 FAM53CQ9NYF3 392 aa10.38□□□□□ -0.75
DDB1-211ENST00000538280 STK17AQ9UEE5 414 aa10.38□□□□□ -0.75
DDB1-211ENST00000538280 PGAP2Q9UHJ9 254 aa10.38□□□□□ -0.75
DDB1-211ENST00000538280 SERPINB13Q9UIV8 391 aa10.38□□□□□ -0.75
DDB1-211ENST00000538280 ADGRG1Q9Y653 693 aa10.38□□□□□ -0.75
DDB1-211ENST00000538280 ASTN2O75129 1339 aaPredicted RBP10.37□□□□□ -0.75
DDB1-211ENST00000538280 SOWAHDA6NJG2 315 aa10.37□□□□□ -0.75
DDB1-211ENST00000538280 LGALS16A8MUM7 142 aa10.37□□□□□ -0.75
DDB1-211ENST00000538280 FAM155AB1AL88 458 aaPredicted RBP10.37□□□□□ -0.75
DDB1-211ENST00000538280 ADM5C9JUS6 153 aa10.37□□□□□ -0.75
DDB1-211ENST00000538280 CCNT1O60563 726 aaKnown RBP10.37□□□□□ -0.75
DDB1-211ENST00000538280 TADA3O75528 432 aa10.37□□□□□ -0.75
DDB1-211ENST00000538280 NPM3O75607 178 aaKnown RBP10.37□□□□□ -0.75
DDB1-211ENST00000538280 TTLL1O95922 423 aa10.37□□□□□ -0.75
DDB1-211ENST00000538280 CCDC175P0C221 793 aa10.37□□□□□ -0.75
DDB1-211ENST00000538280 CCNE1P24864 410 aa10.37□□□□□ -0.75
DDB1-211ENST00000538280 ADCY7P51828 1080 aa10.37□□□□□ -0.75
DDB1-211ENST00000538280 PMS1P54277 932 aaKnown RBP10.37□□□□□ -0.75
DDB1-211ENST00000538280 MAP3K9P80192 1104 aa10.37□□□□□ -0.75
DDB1-211ENST00000538280 HDLBPQ00341 1268 aaKnown RBP10.37□□□□□ -0.75
DDB1-211ENST00000538280 MTF1Q14872 753 aa10.37□□□□□ -0.75
DDB1-211ENST00000538280 ELF2Q15723 593 aa10.37□□□□□ -0.75
DDB1-211ENST00000538280 LETM2Q2VYF4 491 aa10.37□□□□□ -0.75
DDB1-211ENST00000538280 GPATCH4Q5T3I0 446 aaKnown RBP10.37□□□□□ -0.75
DDB1-211ENST00000538280 APOBEC3HQ6NTF7 200 aaKnown RBP10.37□□□□□ -0.75
DDB1-211ENST00000538280 SAMD7Q7Z3H4 446 aa10.37□□□□□ -0.75
DDB1-211ENST00000538280 TMTC1Q8IUR5 882 aa10.37□□□□□ -0.75
DDB1-211ENST00000538280 MICALL2Q8IY33 904 aa10.37□□□□□ -0.75
DDB1-211ENST00000538280 LRRN4CLQ8ND94 238 aa10.37□□□□□ -0.75
DDB1-211ENST00000538280 ANKRD20A12PQ8NF67 263 aa10.37□□□□□ -0.75
DDB1-211ENST00000538280 CCDC17Q96LX7 622 aa10.37□□□□□ -0.75
DDB1-211ENST00000538280 PNMA5Q96PV4 448 aa10.37□□□□□ -0.75
DDB1-211ENST00000538280 DUSP9Q99956 384 aaKnown RBP10.37□□□□□ -0.75
DDB1-211ENST00000538280 UBA5Q9GZZ9 404 aa10.37□□□□□ -0.75
DDB1-211ENST00000538280 JMJD4Q9H9V9 463 aa10.37□□□□□ -0.75
DDB1-211ENST00000538280 RIC8AQ9NPQ8 531 aa10.37□□□□□ -0.75
DDB1-211ENST00000538280 USP40Q9NVE5 1235 aa10.37□□□□□ -0.75
DDB1-211ENST00000538280 TMEM260Q9NX78 707 aa10.37□□□□□ -0.75
DDB1-211ENST00000538280 TAB2Q9NYJ8 693 aa10.37□□□□□ -0.75
DDB1-211ENST00000538280 TTF2Q9UNY4 1162 aaKnown RBP10.37□□□□□ -0.75
DDB1-211ENST00000538280 FRMPD2Q68DX3 1309 aaPredicted RBP10.36□□□□□ -0.75
DDB1-211ENST00000538280 PNMA6FA0A0J9YX94 578 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 PSMA7O14818 248 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 RIMBP2O15034 1052 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 N4BP3O15049 544 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 SLC26A4O43511 780 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 PPP1R11O60927 126 aaPredicted RBP10.36□□□□□ -0.75
DDB1-211ENST00000538280 CASP14P31944 242 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 CCT6AP40227 531 aaKnown RBP10.36□□□□□ -0.75
DDB1-211ENST00000538280 SOX10P56693 466 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 ERVK-24P63145 666 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 GRB10Q13322 594 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 PICALMQ13492 652 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 STIM1Q13586 685 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 GRIPAP1Q4V328 841 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 TMEM119Q4V9L6 283 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 JAKMIP3Q5VZ66 844 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 PPP4R3AQ6IN85 833 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 FBXO38Q6PIJ6 1188 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 FOXR2Q6PJQ5 311 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 PODNQ7Z5L7 613 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 POTEDQ86YR6 584 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 SMAP1Q8IYB5 467 aaPredicted RBP10.36□□□□□ -0.75
DDB1-211ENST00000538280 LRRC47Q8N1G4 583 aaKnown RBP10.36□□□□□ -0.75
DDB1-211ENST00000538280 MB21D1Q8N884 522 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 P2RX5Q93086 422 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 TEKT1Q969V4 418 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 MKL1Q969V6 931 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 ZDHHC15Q96MV8 337 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 WDR24Q96S15 920 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 DBNDD1Q9H9R9 158 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 KCNQ5Q9NR82 932 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 ABHD10Q9NUJ1 306 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 BLOC1S4Q9NUP1 217 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 OGFRQ9NZT2 677 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 BIN2Q9UBW5 565 aaPredicted RBP10.36□□□□□ -0.75
DDB1-211ENST00000538280 CNOT7Q9UIV1 285 aaKnown RBP10.36□□□□□ -0.75
DDB1-211ENST00000538280 DDX41Q9UJV9 622 aaKnown RBP10.36□□□□□ -0.75
DDB1-211ENST00000538280 MTMR7Q9Y216 660 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 MRFAP1Q9Y605 127 aa10.36□□□□□ -0.75
DDB1-211ENST00000538280 PDE4DIPQ5VU43 2346 aa10.35□□□□□ -0.75
DDB1-211ENST00000538280 PVALEFA0A1B0GWK0 134 aa10.35□□□□□ -0.75
DDB1-211ENST00000538280 BICDL2A1A5D9 508 aa10.35□□□□□ -0.75
DDB1-211ENST00000538280 TRIM49BA6NDI0 452 aa10.35□□□□□ -0.75
DDB1-211ENST00000538280 EFCAB8A8MWE9 144 aa10.35□□□□□ -0.75
DDB1-211ENST00000538280 RNF225M0QZC1 329 aaPredicted RBP10.35□□□□□ -0.75
DDB1-211ENST00000538280 PSMD14O00487 310 aa10.35□□□□□ -0.75
DDB1-211ENST00000538280 COBLO75128 1261 aa10.35□□□□□ -0.75
DDB1-211ENST00000538280 HLA-DOAP06340 250 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms