RNA–Protein interactions for RNA: ENST00000537120.5

DDB1-208, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-208ENST00000537120 CHST3Q7LGC8 479 aa9.75□□□□□ -0.85
DDB1-208ENST00000537120 CATIPQ7Z7H3 387 aa9.75□□□□□ -0.85
DDB1-208ENST00000537120 HOMER1Q86YM7 354 aa9.75□□□□□ -0.85
DDB1-208ENST00000537120 FAM126BQ8IXS8 530 aa9.75□□□□□ -0.85
DDB1-208ENST00000537120 TAAR1Q96RJ0 339 aa9.75□□□□□ -0.85
DDB1-208ENST00000537120 RMDN3Q96TC7 470 aa9.75□□□□□ -0.85
DDB1-208ENST00000537120 MTG1Q9BT17 334 aaPredicted RBP9.75□□□□□ -0.85
DDB1-208ENST00000537120 TRPV6Q9H1D0 765 aa9.75□□□□□ -0.85
DDB1-208ENST00000537120 HIPK3Q9H422 1215 aa9.75□□□□□ -0.85
DDB1-208ENST00000537120 TBX21Q9UL17 535 aa9.75□□□□□ -0.85
DDB1-208ENST00000537120 NOD1Q9Y239 953 aa9.75□□□□□ -0.85
DDB1-208ENST00000537120 STXBP5LQ9Y2K9 1186 aa9.75□□□□□ -0.85
DDB1-208ENST00000537120 RBM47A0AV96 593 aaKnown RBP9.74□□□□□ -0.85
DDB1-208ENST00000537120 FGBP02675 491 aa9.74□□□□□ -0.85
DDB1-208ENST00000537120 CYP21A2P08686 494 aa9.74□□□□□ -0.85
DDB1-208ENST00000537120 SUPT20HL2P0C7V6 817 aa9.74□□□□□ -0.85
DDB1-208ENST00000537120 ACRP10323 421 aa9.74□□□□□ -0.85
DDB1-208ENST00000537120 MYCLP12524 364 aaPredicted RBP9.74□□□□□ -0.85
DDB1-208ENST00000537120 CSF2RAP15509 400 aa9.74□□□□□ -0.85
DDB1-208ENST00000537120 CCL23P55773 120 aa9.74□□□□□ -0.85
DDB1-208ENST00000537120 CASC1Q6TDU7 716 aa9.74□□□□□ -0.85
DDB1-208ENST00000537120 NFXL1Q6ZNB6 911 aa9.74□□□□□ -0.85
DDB1-208ENST00000537120 RPUSD2Q8IZ73 545 aaKnown RBP9.74□□□□□ -0.85
DDB1-208ENST00000537120 STAG2Q8N3U4 1231 aa9.74□□□□□ -0.85
DDB1-208ENST00000537120 SYTL5Q8TDW5 730 aaPredicted RBP9.74□□□□□ -0.85
DDB1-208ENST00000537120 PIBF1Q8WXW3 757 aa9.74□□□□□ -0.85
DDB1-208ENST00000537120 IWS1Q96ST2 819 aa9.74□□□□□ -0.85
DDB1-208ENST00000537120 MAF1Q9H063 256 aa9.74□□□□□ -0.85
DDB1-208ENST00000537120 MTIF3Q9H2K0 278 aaKnown RBP9.74□□□□□ -0.85
DDB1-208ENST00000537120 SEMA6BQ9H3T3 888 aa9.74□□□□□ -0.85
DDB1-208ENST00000537120 PCDHA1Q9Y5I3 950 aa9.74□□□□□ -0.85
DDB1-208ENST00000537120 SGSM2O43147 1006 aa9.73□□□□□ -0.85
DDB1-208ENST00000537120 EIF3JO75822 258 aaKnown RBP9.73□□□□□ -0.85
DDB1-208ENST00000537120 GH1P01241 217 aa9.73□□□□□ -0.85
DDB1-208ENST00000537120 CD4P01730 458 aa9.73□□□□□ -0.85
DDB1-208ENST00000537120 EIF2AK2P19525 551 aaKnown RBP9.73□□□□□ -0.85
DDB1-208ENST00000537120 SEC23AQ15436 765 aa9.73□□□□□ -0.85
DDB1-208ENST00000537120 PSRC1Q6PGN9 363 aaPredicted RBP9.73□□□□□ -0.85
DDB1-208ENST00000537120 ZNF365Q70YC5 407 aa9.73□□□□□ -0.85
DDB1-208ENST00000537120 SLC43A3Q8NBI5 491 aa9.73□□□□□ -0.85
DDB1-208ENST00000537120 RETREG2Q8NC44 543 aa9.73□□□□□ -0.85
DDB1-208ENST00000537120 COPS5Q92905 334 aa9.73□□□□□ -0.85
DDB1-208ENST00000537120 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.73□□□□□ -0.851e-6■■■□□ 15.6
DDB1-208ENST00000537120 IL25Q9H293 177 aa9.73□□□□□ -0.85
DDB1-208ENST00000537120 IL23AQ9NPF7 189 aa9.73□□□□□ -0.85
DDB1-208ENST00000537120 PALM3A6NDB9 673 aaPredicted RBP9.72□□□□□ -0.85
DDB1-208ENST00000537120 CCDC69A6NI79 296 aa9.72□□□□□ -0.85
DDB1-208ENST00000537120 SPDYE4A6NLX3 237 aa9.72□□□□□ -0.85
DDB1-208ENST00000537120 GCOM1H8Y6P7 765 aaPredicted RBP9.72□□□□□ -0.85
DDB1-208ENST00000537120 DLL1O00548 723 aa9.72□□□□□ -0.85
DDB1-208ENST00000537120 ZBTB5O15062 677 aa9.72□□□□□ -0.85
DDB1-208ENST00000537120 B4GALT4O60513 344 aa9.72□□□□□ -0.85
DDB1-208ENST00000537120 NR3C2P08235 984 aa9.72□□□□□ -0.85
DDB1-208ENST00000537120 POLR2MP0CAP2 368 aa9.72□□□□□ -0.85
DDB1-208ENST00000537120 CASTP20810 708 aaKnown RBP9.72□□□□□ -0.85
DDB1-208ENST00000537120 PURAQ00577 322 aaKnown RBP9.72□□□□□ -0.85
DDB1-208ENST00000537120 GRM4Q14833 912 aa9.72□□□□□ -0.85
DDB1-208ENST00000537120 LY6KQ17RY6 165 aa9.72□□□□□ -0.85
DDB1-208ENST00000537120 NBPF20Q3BBV1 942 aa9.72□□□□□ -0.85
DDB1-208ENST00000537120 TMEM240Q5SV17 173 aa9.72□□□□□ -0.85
DDB1-208ENST00000537120 FCHSD1Q86WN1 690 aa9.72□□□□□ -0.85
DDB1-208ENST00000537120 DHX37Q8IY37 1157 aaKnown RBP9.72□□□□□ -0.85
DDB1-208ENST00000537120 CTCFLQ8NI51 663 aaPredicted RBP9.72□□□□□ -0.85
DDB1-208ENST00000537120 AFG1LQ8WV93 481 aa9.72□□□□□ -0.85
DDB1-208ENST00000537120 MAP4K1Q92918 833 aa9.72□□□□□ -0.85
DDB1-208ENST00000537120 PIGSQ96S52 555 aa9.72□□□□□ -0.85
DDB1-208ENST00000537120 CDX2Q99626 313 aaPredicted RBP9.72□□□□□ -0.85
DDB1-208ENST00000537120 ALDH8A1Q9H2A2 487 aaPredicted RBP9.72□□□□□ -0.85
DDB1-208ENST00000537120 MAD2L2Q9UI95 211 aa9.72□□□□□ -0.85
DDB1-208ENST00000537120 MSRAQ9UJ68 235 aa9.72□□□□□ -0.85
DDB1-208ENST00000537120 RBM8AQ9Y5S9 174 aaKnown RBP9.72□□□□□ -0.85
DDB1-208ENST00000537120 MRVI1Q9Y6F6 885 aa9.72□□□□□ -0.85
DDB1-208ENST00000537120 GRIN2DO15399 1336 aa9.72□□□□□ -0.85
DDB1-208ENST00000537120 MYH6P13533 1939 aa9.72□□□□□ -0.85
DDB1-208ENST00000537120 PNMA6FA0A0J9YX94 578 aa9.71□□□□□ -0.86
DDB1-208ENST00000537120 A6NJR5 290 aa9.71□□□□□ -0.86
DDB1-208ENST00000537120 ZBBXA8MT70 800 aa9.71□□□□□ -0.86
DDB1-208ENST00000537120 CYP2C9P11712 490 aa9.71□□□□□ -0.86
DDB1-208ENST00000537120 EDNRBP24530 442 aa9.71□□□□□ -0.86
DDB1-208ENST00000537120 HOXA13P31271 388 aaPredicted RBP9.71□□□□□ -0.86
DDB1-208ENST00000537120 KIF5BP33176 963 aa9.71□□□□□ -0.86
DDB1-208ENST00000537120 MCM5P33992 734 aa9.71□□□□□ -0.86
DDB1-208ENST00000537120 LAMC2Q13753 1193 aa9.71□□□□□ -0.86
DDB1-208ENST00000537120 SYNE3Q6ZMZ3 975 aa9.71□□□□□ -0.86
DDB1-208ENST00000537120 C16orf59Q7L2K0 433 aa9.71□□□□□ -0.86
DDB1-208ENST00000537120 OTOP2Q7RTS6 562 aa9.71□□□□□ -0.86
DDB1-208ENST00000537120 HOMEZQ8IX15 550 aa9.71□□□□□ -0.86
DDB1-208ENST00000537120 TMTC2Q8N394 836 aa9.71□□□□□ -0.86
DDB1-208ENST00000537120 PPP1R13LQ8WUF5 828 aa9.71□□□□□ -0.86
DDB1-208ENST00000537120 CUL5Q93034 780 aa9.71□□□□□ -0.86
DDB1-208ENST00000537120 RRP36Q96EU6 259 aaKnown RBP9.71□□□□□ -0.86
DDB1-208ENST00000537120 NOC4LQ9BVI4 516 aaKnown RBP9.71□□□□□ -0.86
DDB1-208ENST00000537120 FTOQ9C0B1 505 aaKnown RBP eCLIP9.71□□□□□ -0.86
DDB1-208ENST00000537120 ANO2Q9NQ90 1003 aa9.71□□□□□ -0.86
DDB1-208ENST00000537120 PXMP2Q9NR77 195 aa9.71□□□□□ -0.86
DDB1-208ENST00000537120 TRMT13Q9NUP7 481 aaKnown RBP9.71□□□□□ -0.86
DDB1-208ENST00000537120 MAP3K20Q9NYL2 800 aaKnown RBP9.71□□□□□ -0.86
DDB1-208ENST00000537120 COL20A1Q9P218 1284 aa9.71□□□□□ -0.86
DDB1-208ENST00000537120 BAZ2BQ9UIF8 2168 aaKnown RBP9.71□□□□□ -0.86
DDB1-208ENST00000537120 LTBP2Q14767 1821 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms