RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 ZNF473Q8WTR7 871 aaKnown RBP5.91□□□□□ -1.46
PTPRD-213ENST00000537002 TCHPQ9BT92 498 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 FAF1Q9UNN5 650 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-213ENST00000537002 RTL9Q8NET4 1388 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 TRAF5O00463 557 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 LTKP29376 864 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 SFMBT2Q5VUG0 894 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 PHLDB3Q6NSJ2 640 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 ESR2Q92731 530 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 FERMT2Q96AC1 680 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 HVCN1Q96D96 273 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 CALR3Q96L12 384 aaKnown RBP5.91□□□□□ -1.46
PTPRD-213ENST00000537002 PLVAPQ9BX97 442 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 EBF2Q9HAK2 575 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 PIK3C2BO00750 1634 aa5.91□□□□□ -1.46
PTPRD-213ENST00000537002 CASQ2O14958 399 aaPredicted RBP5.9□□□□□ -1.46
PTPRD-213ENST00000537002 CTNND1O60716 968 aaKnown RBP5.9□□□□□ -1.46
PTPRD-213ENST00000537002 TTC38Q5R3I4 469 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 COPS6Q7L5N1 327 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 LRRN4CLQ8ND94 238 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 EDEM3Q9BZQ6 932 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 STK32BQ9NY57 414 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 CTTNBP2NLQ9P2B4 639 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 LRWD1Q9UFC0 647 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 CRB1P82279 1406 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 SLIT1O75093 1534 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 WFS1O76024 890 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 DEXIO95424 95 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 PDHA1P08559 390 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 RFC1P35251 1148 aaPredicted RBP5.9□□□□□ -1.46
PTPRD-213ENST00000537002 CETN1Q12798 172 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 PSMD2Q13200 908 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 ANKRD13DQ6ZTN6 518 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 TRMT1LQ7Z2T5 733 aaKnown RBP5.9□□□□□ -1.46
PTPRD-213ENST00000537002 TRAPPC9Q96Q05 1148 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 SCOCQ9UIL1 159 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 STK36Q9NRP7 1315 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 FLT4P35916 1363 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 LRRC10BA6NIK2 292 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 ATP2A1O14983 1001 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 IMPDH2P12268 514 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 KLHL30Q0D2K2 578 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 MKRN3Q13064 507 aaKnown RBP5.9□□□□□ -1.46
PTPRD-213ENST00000537002 LDHAL6AQ6ZMR3 332 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 ADAT2Q7Z6V5 191 aaKnown RBP5.9□□□□□ -1.46
PTPRD-213ENST00000537002 SUCLG2Q96I99 432 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 MAN1B1Q9UKM7 699 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 NFU1Q9UMS0 254 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 PLAAQ9Y263 795 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 RABGAP1Q9Y3P9 1069 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 hCG_2014768A0A024R1R8 64 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 IL15P40933 162 aaPredicted RBP5.9□□□□□ -1.46
PTPRD-213ENST00000537002 NUGGCQ68CJ6 796 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 DTHD1Q6ZMT9 781 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 PEX26Q7Z412 305 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 MIGA1Q8NAN2 632 aa5.9□□□□□ -1.46
PTPRD-213ENST00000537002 INTS9Q9NV88 658 aaKnown RBP5.9□□□□□ -1.46
PTPRD-213ENST00000537002 hCG_1642624A0A1W2PR95 340 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 NDUFA10O95299 355 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 PLCB3Q01970 1234 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 GUCY1A3Q02108 690 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 RASSF7Q02833 373 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 RBM12BQ8IXT5 1001 aaKnown RBP5.9□□□□□ -1.47
PTPRD-213ENST00000537002 TMTC2Q8N394 836 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 LINS1Q8NG48 757 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 CNKSR1Q969H4 720 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 MPHOSPH6Q99547 160 aaKnown RBP5.9□□□□□ -1.47
PTPRD-213ENST00000537002 MAGEF1Q9HAY2 307 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 HDAC6Q9UBN7 1215 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 ASIC3Q9UHC3 531 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 ZMYM6O95789 1325 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 H7C1D1 291 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 PDIA3P30101 505 aaKnown RBP5.9□□□□□ -1.47
PTPRD-213ENST00000537002 EHHADHQ08426 723 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 FOXR1Q6PIV2 292 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 CCDC84Q86UT8 332 aaPredicted RBP5.9□□□□□ -1.47
PTPRD-213ENST00000537002 CCDC105Q8IYK2 499 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 SYCP3Q8IZU3 236 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 GSDMBQ8TAX9 411 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 RIN2Q8WYP3 895 aaPredicted RBP5.9□□□□□ -1.47
PTPRD-213ENST00000537002 FAM129AQ9BZQ8 928 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 C5orf60A6NFR6 353 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 B4DLN1 442 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 SART1O43290 800 aaKnown RBP5.9□□□□□ -1.47
PTPRD-213ENST00000537002 DNM2P50570 870 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 PAPOLAP51003 745 aaKnown RBP5.9□□□□□ -1.47
PTPRD-213ENST00000537002 NAPAP54920 295 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 CTDSPL2Q05D32 466 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 ST3GAL1Q11201 340 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 PDIA5Q14554 519 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 KIRREL3Q8IZU9 778 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 ZNF444Q8N0Y2 327 aaPredicted RBP5.9□□□□□ -1.47
PTPRD-213ENST00000537002 OSBPL1AQ9BXW6 950 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 MRPL44Q9H9J2 332 aaKnown RBP5.9□□□□□ -1.47
PTPRD-213ENST00000537002 POLD4Q9HCU8 107 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 ZFATQ9P243 1243 aa5.9□□□□□ -1.47
PTPRD-213ENST00000537002 SETD1AO15047 1707 aaKnown RBP5.89□□□□□ -1.47
PTPRD-213ENST00000537002 CMTR1Q8N1G2 835 aaKnown RBP5.89□□□□□ -1.47
PTPRD-213ENST00000537002 GPR108Q9NPR9 543 aa5.89□□□□□ -1.47
PTPRD-213ENST00000537002 LIMA1Q9UHB6 759 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms