RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 AP5M1Q9H0R1 490 aa16.54■□□□□ 0.24
UBE3B-206ENST00000536398 PRDM5Q9NQX1 630 aaPredicted RBP16.54■□□□□ 0.24
UBE3B-206ENST00000536398 LAMA3Q16787 3333 aa16.53■□□□□ 0.24
UBE3B-206ENST00000536398 TRIM43BA6NCK2 446 aa16.53■□□□□ 0.24
UBE3B-206ENST00000536398 PQBP1O60828 265 aaKnown RBP16.53■□□□□ 0.24
UBE3B-206ENST00000536398 KIF5BP33176 963 aa16.53■□□□□ 0.24
UBE3B-206ENST00000536398 FXR1P51114 621 aaKnown RBP eCLIP16.53■□□□□ 0.24
UBE3B-206ENST00000536398 GHRHRQ02643 423 aa16.53■□□□□ 0.24
UBE3B-206ENST00000536398 ARHGEF16Q5VV41 709 aa16.53■□□□□ 0.24
UBE3B-206ENST00000536398 CXCL17Q6UXB2 119 aa16.53■□□□□ 0.24
UBE3B-206ENST00000536398 FANCBQ8NB91 859 aa16.53■□□□□ 0.24
UBE3B-206ENST00000536398 TRIM43Q96BQ3 446 aaPredicted RBP16.53■□□□□ 0.24
UBE3B-206ENST00000536398 SPZ1Q9BXG8 430 aa16.53■□□□□ 0.24
UBE3B-206ENST00000536398 PDLIM7Q9NR12 457 aa16.53■□□□□ 0.24
UBE3B-206ENST00000536398 PXMP2Q9NR77 195 aa16.53■□□□□ 0.24
UBE3B-206ENST00000536398 Q9Y3F1 56 aa16.53■□□□□ 0.24
UBE3B-206ENST00000536398 TRIOBPQ9H2D6 2365 aa16.53■□□□□ 0.24
UBE3B-206ENST00000536398 MYH6P13533 1939 aa16.53■□□□□ 0.24
UBE3B-206ENST00000536398 ITGB8P26012 769 aa16.52■□□□□ 0.24
UBE3B-206ENST00000536398 KRT32Q14532 448 aa16.52■□□□□ 0.24
UBE3B-206ENST00000536398 SEPT14Q6ZU15 432 aa16.52■□□□□ 0.24
UBE3B-206ENST00000536398 FCHSD1Q86WN1 690 aa16.52■□□□□ 0.24
UBE3B-206ENST00000536398 RRP36Q96EU6 259 aaKnown RBP16.52■□□□□ 0.24
UBE3B-206ENST00000536398 ZFP91Q96JP5 570 aaPredicted RBP16.52■□□□□ 0.24
UBE3B-206ENST00000536398 GLT1D1Q96MS3 346 aa16.52■□□□□ 0.24
UBE3B-206ENST00000536398 JAKMIP1Q96N16 626 aaKnown RBP16.52■□□□□ 0.24
UBE3B-206ENST00000536398 MPHOSPH6Q99547 160 aaKnown RBP16.52■□□□□ 0.24
UBE3B-206ENST00000536398 MAF1Q9H063 256 aa16.52■□□□□ 0.24
UBE3B-206ENST00000536398 GCOM1H8Y6P7 765 aaPredicted RBP16.51■□□□□ 0.23
UBE3B-206ENST00000536398 NR3C2P08235 984 aa16.51■□□□□ 0.23
UBE3B-206ENST00000536398 POLR2MP0CAP2 368 aa16.51■□□□□ 0.23
UBE3B-206ENST00000536398 CALM1P0DP23 149 aa16.51■□□□□ 0.23
UBE3B-206ENST00000536398 CALM2P0DP24 149 aa16.51■□□□□ 0.23
UBE3B-206ENST00000536398 CALM3P0DP25 149 aa16.51■□□□□ 0.23
UBE3B-206ENST00000536398 SMARCA1P28370 1054 aa16.51■□□□□ 0.23
UBE3B-206ENST00000536398 BMP8BP34820 402 aa16.51■□□□□ 0.23
UBE3B-206ENST00000536398 GNAQP50148 359 aa16.51■□□□□ 0.23
UBE3B-206ENST00000536398 CDK7P50613 346 aa16.51■□□□□ 0.23
UBE3B-206ENST00000536398 PSMC6P62333 389 aa16.51■□□□□ 0.23
UBE3B-206ENST00000536398 FAAP100Q0VG06 881 aa16.51■□□□□ 0.23
UBE3B-206ENST00000536398 LY6KQ17RY6 165 aa16.51■□□□□ 0.23
UBE3B-206ENST00000536398 APOA5Q6Q788 366 aa16.51■□□□□ 0.23
UBE3B-206ENST00000536398 TMTC3Q6ZXV5 915 aa16.51■□□□□ 0.23
UBE3B-206ENST00000536398 OR6J1Q8NGC5 347 aa16.51■□□□□ 0.23
UBE3B-206ENST00000536398 IL31RAQ8NI17 732 aa16.51■□□□□ 0.23
UBE3B-206ENST00000536398 SCFD2Q8WU76 684 aa16.51■□□□□ 0.23
UBE3B-206ENST00000536398 IWS1Q96ST2 819 aa16.51■□□□□ 0.23
UBE3B-206ENST00000536398 LZTS2Q9BRK4 669 aa16.51■□□□□ 0.23
UBE3B-206ENST00000536398 PDCD2LQ9BRP1 358 aa16.51■□□□□ 0.23
UBE3B-206ENST00000536398 UBE2OQ9C0C9 1292 aaKnown RBP16.51■□□□□ 0.23
UBE3B-206ENST00000536398 SZT2Q5T011 3432 aa16.51■□□□□ 0.23
UBE3B-206ENST00000536398 GRIN2DO15399 1336 aa16.5■□□□□ 0.23
UBE3B-206ENST00000536398 ELP1O95163 1332 aa16.5■□□□□ 0.23
UBE3B-206ENST00000536398 B4DLN1 442 aa16.5■□□□□ 0.23
UBE3B-206ENST00000536398 REC8O95072 547 aa16.5■□□□□ 0.23
UBE3B-206ENST00000536398 TXNP10599 105 aaKnown RBP16.5■□□□□ 0.23
UBE3B-206ENST00000536398 MYCLP12524 364 aaPredicted RBP16.5■□□□□ 0.23
UBE3B-206ENST00000536398 MRPL12P52815 198 aaKnown RBP16.5■□□□□ 0.23
UBE3B-206ENST00000536398 PPP2R5BQ15173 497 aa16.5■□□□□ 0.23
UBE3B-206ENST00000536398 STXBP2Q15833 593 aa16.5■□□□□ 0.23
UBE3B-206ENST00000536398 CCDC62Q6P9F0 684 aa16.5■□□□□ 0.23
UBE3B-206ENST00000536398 Q6ZUG5 572 aa16.5■□□□□ 0.23
UBE3B-206ENST00000536398 ANKRD33Q7Z3H0 272 aa16.5■□□□□ 0.23
UBE3B-206ENST00000536398 FAM217BQ9NTX9 383 aaPredicted RBP16.5■□□□□ 0.23
UBE3B-206ENST00000536398 PRKAG2Q9UGJ0 569 aa16.5■□□□□ 0.23
UBE3B-206ENST00000536398 A0A0U1RQG5 324 aaPredicted RBP16.49■□□□□ 0.23
UBE3B-206ENST00000536398 KLF18A0A0U1RQI7 1052 aa16.49■□□□□ 0.23
UBE3B-206ENST00000536398 ARVCFO00192 962 aa16.49■□□□□ 0.23
UBE3B-206ENST00000536398 SOX1O00570 391 aaPredicted RBP16.49■□□□□ 0.23
UBE3B-206ENST00000536398 ZBTB43O43298 467 aa16.49■□□□□ 0.23
UBE3B-206ENST00000536398 EIF3JO75822 258 aaKnown RBP16.49■□□□□ 0.23
UBE3B-206ENST00000536398 RGS20O76081 388 aa16.49■□□□□ 0.23
UBE3B-206ENST00000536398 CLTBP09497 229 aa16.49■□□□□ 0.23
UBE3B-206ENST00000536398 APOBRQ0VD83 1088 aa16.49■□□□□ 0.23
UBE3B-206ENST00000536398 TTLL4Q14679 1199 aa16.49■□□□□ 0.23
UBE3B-206ENST00000536398 SYNE3Q6ZMZ3 975 aa16.49■□□□□ 0.23
UBE3B-206ENST00000536398 PPP1R13LQ8WUF5 828 aa16.49■□□□□ 0.23
UBE3B-206ENST00000536398 BADQ92934 168 aa16.49■□□□□ 0.23
UBE3B-206ENST00000536398 LBHD1Q9BQE6 289 aaPredicted RBP16.49■□□□□ 0.23
UBE3B-206ENST00000536398 USP26Q9BXU7 913 aa16.49■□□□□ 0.23
UBE3B-206ENST00000536398 MAP3K20Q9NYL2 800 aaKnown RBP16.49■□□□□ 0.23
UBE3B-206ENST00000536398 SEC63Q9UGP8 760 aaKnown RBP16.49■□□□□ 0.23
UBE3B-206ENST00000536398 ZEB2O60315 1214 aa16.48■□□□□ 0.23
UBE3B-206ENST00000536398 SLC34A2O95436 690 aa16.48■□□□□ 0.23
UBE3B-206ENST00000536398 MYL3P08590 195 aa16.48■□□□□ 0.23
UBE3B-206ENST00000536398 HMGB1P09429 215 aaKnown RBP16.48■□□□□ 0.23
UBE3B-206ENST00000536398 CDC27P30260 824 aa16.48■□□□□ 0.23
UBE3B-206ENST00000536398 FUT2Q10981 343 aa16.48■□□□□ 0.23
UBE3B-206ENST00000536398 TRAF1Q13077 416 aa16.48■□□□□ 0.23
UBE3B-206ENST00000536398 PGM5Q15124 567 aa16.48■□□□□ 0.23
UBE3B-206ENST00000536398 USP17L6PQ6QN14 398 aa16.48■□□□□ 0.23
UBE3B-206ENST00000536398 BLOC1S2Q6QNY1 142 aa16.48■□□□□ 0.23
UBE3B-206ENST00000536398 VSIG10LQ86VR7 867 aa16.48■□□□□ 0.23
UBE3B-206ENST00000536398 GPKOWQ92917 476 aaPredicted RBP eCLIP16.48■□□□□ 0.23
UBE3B-206ENST00000536398 TOX2Q96NM4 488 aa16.48■□□□□ 0.23
UBE3B-206ENST00000536398 TMEM39AQ9NV64 488 aa16.48■□□□□ 0.23
UBE3B-206ENST00000536398 NAP1L2Q9ULW6 460 aaPredicted RBP16.48■□□□□ 0.23
UBE3B-206ENST00000536398 DCDC2CA8MYV0 355 aa16.47■□□□□ 0.23
UBE3B-206ENST00000536398 KIAA0355O15063 1070 aa16.47■□□□□ 0.23
UBE3B-206ENST00000536398 NKRFO15226 690 aaKnown RBP eCLIP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms