RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 MBLAC2Q68D91 279 aa7.85□□□□□ -1.15
VBP1-203ENST00000535916 USP33Q8TEY7 942 aa7.85□□□□□ -1.15
VBP1-203ENST00000535916 USP40Q9NVE5 1235 aa7.85□□□□□ -1.15
VBP1-203ENST00000535916 FUCA1P04066 466 aa7.84□□□□□ -1.15
VBP1-203ENST00000535916 PLS3P13797 630 aa7.84□□□□□ -1.15
VBP1-203ENST00000535916 PLP2Q04941 152 aa7.84□□□□□ -1.15
VBP1-203ENST00000535916 CACNB2Q08289 660 aaPredicted RBP7.84□□□□□ -1.15
VBP1-203ENST00000535916 SCRN1Q12765 414 aa7.84□□□□□ -1.15
VBP1-203ENST00000535916 CPA5Q8WXQ8 436 aa7.84□□□□□ -1.15
VBP1-203ENST00000535916 MRRFQ96E11 262 aaKnown RBP7.84□□□□□ -1.15
VBP1-203ENST00000535916 GPRC5CQ9NQ84 441 aa7.84□□□□□ -1.15
VBP1-203ENST00000535916 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.84□□□□□ -1.152e-7■■□□□ 13.4
VBP1-203ENST00000535916 EMC9Q9Y3B6 208 aa7.84□□□□□ -1.15
VBP1-203ENST00000535916 NTRK1P04629 796 aa7.83□□□□□ -1.16
VBP1-203ENST00000535916 UBXN11Q5T124 520 aa7.83□□□□□ -1.16
VBP1-203ENST00000535916 ZFYVE27Q5T4F4 411 aa7.83□□□□□ -1.16
VBP1-203ENST00000535916 FERMT3Q86UX7 667 aa7.83□□□□□ -1.16
VBP1-203ENST00000535916 CARFQ8N187 725 aa7.83□□□□□ -1.16
VBP1-203ENST00000535916 COPS5Q92905 334 aa7.83□□□□□ -1.16
VBP1-203ENST00000535916 SEC16BQ96JE7 1060 aa7.83□□□□□ -1.16
VBP1-203ENST00000535916 ZBTB7AO95365 584 aa7.82□□□□□ -1.16
VBP1-203ENST00000535916 EFEMP1Q12805 493 aa7.82□□□□□ -1.16
VBP1-203ENST00000535916 DBX2Q6ZNG2 339 aa7.82□□□□□ -1.16
VBP1-203ENST00000535916 BVESQ8NE79 360 aa7.82□□□□□ -1.16
VBP1-203ENST00000535916 PLEKHO2Q8TD55 490 aa7.82□□□□□ -1.16
VBP1-203ENST00000535916 DPF3Q92784 378 aa7.82□□□□□ -1.16
VBP1-203ENST00000535916 ANAPC16Q96DE5 110 aa7.82□□□□□ -1.16
VBP1-203ENST00000535916 DDX11Q96FC9 970 aa7.82□□□□□ -1.16
VBP1-203ENST00000535916 LGR4Q9BXB1 951 aa7.82□□□□□ -1.16
VBP1-203ENST00000535916 ACBD3Q9H3P7 528 aa7.82□□□□□ -1.16
VBP1-203ENST00000535916 SPATA6Q9NWH7 488 aaPredicted RBP7.82□□□□□ -1.16
VBP1-203ENST00000535916 MARCH2Q9P0N8 246 aa7.82□□□□□ -1.16
VBP1-203ENST00000535916 THBDP07204 575 aa7.81□□□□□ -1.16
VBP1-203ENST00000535916 C8BP07358 591 aa7.81□□□□□ -1.16
VBP1-203ENST00000535916 ADRB1P08588 477 aa7.81□□□□□ -1.16
VBP1-203ENST00000535916 ZBTB8AQ96BR9 441 aa7.81□□□□□ -1.16
VBP1-203ENST00000535916 MMP19Q99542 508 aa7.81□□□□□ -1.16
VBP1-203ENST00000535916 APBA2Q99767 749 aa7.81□□□□□ -1.16
VBP1-203ENST00000535916 KIAA1522Q9P206 1035 aaPredicted RBP7.81□□□□□ -1.16
VBP1-203ENST00000535916 DUSP10Q9Y6W6 482 aa7.81□□□□□ -1.16
VBP1-203ENST00000535916 NOBOXO60393 691 aa7.8□□□□□ -1.16
VBP1-203ENST00000535916 SMAD4Q13485 552 aaKnown RBP7.8□□□□□ -1.16
VBP1-203ENST00000535916 INF2Q27J81 1249 aa7.8□□□□□ -1.16
VBP1-203ENST00000535916 SPATS1Q496A3 300 aa7.8□□□□□ -1.16
VBP1-203ENST00000535916 GTF2IRD2BQ6EKJ0 949 aa7.8□□□□□ -1.16
VBP1-203ENST00000535916 GTF2IRD2Q86UP8 949 aa7.8□□□□□ -1.16
VBP1-203ENST00000535916 GGNQ86UU5 652 aa7.8□□□□□ -1.16
VBP1-203ENST00000535916 DCP2Q8IU60 420 aaKnown RBP7.8□□□□□ -1.16
VBP1-203ENST00000535916 TEX2Q8IWB9 1127 aa7.8□□□□□ -1.16
VBP1-203ENST00000535916 TRIM59Q8IWR1 403 aa7.8□□□□□ -1.16
VBP1-203ENST00000535916 CRACR2BQ8N4Y2 399 aaPredicted RBP7.8□□□□□ -1.16
VBP1-203ENST00000535916 DDX1Q92499 740 aaKnown RBP7.8□□□□□ -1.16
VBP1-203ENST00000535916 SYT3Q9BQG1 590 aa7.8□□□□□ -1.16
VBP1-203ENST00000535916 BTG4Q9NY30 223 aa7.8□□□□□ -1.16
VBP1-203ENST00000535916 NTMQ9P121 344 aa7.8□□□□□ -1.16
VBP1-203ENST00000535916 NOP56O00567 594 aaKnown RBP7.79□□□□□ -1.16
VBP1-203ENST00000535916 SARSP49591 514 aaKnown RBP7.79□□□□□ -1.16
VBP1-203ENST00000535916 GJA9P57773 515 aa7.79□□□□□ -1.16
VBP1-203ENST00000535916 CYP4F3Q08477 520 aa7.79□□□□□ -1.16
VBP1-203ENST00000535916 POMZP3Q6PJE2 187 aa7.79□□□□□ -1.16
VBP1-203ENST00000535916 PPP1R14AQ96A00 147 aa7.79□□□□□ -1.16
VBP1-203ENST00000535916 TGIF2Q9GZN2 237 aa7.79□□□□□ -1.16
VBP1-203ENST00000535916 STRIP2Q9ULQ0 834 aa7.79□□□□□ -1.16
VBP1-203ENST00000535916 INPP5FQ9Y2H2 1132 aa7.79□□□□□ -1.16
VBP1-203ENST00000535916 CYP2C8P10632 490 aa7.78□□□□□ -1.16
VBP1-203ENST00000535916 CNR2P34972 360 aa7.78□□□□□ -1.16
VBP1-203ENST00000535916 ZNF143P52747 638 aaPredicted RBP7.78□□□□□ -1.16
VBP1-203ENST00000535916 NCAPHQ15003 741 aa7.78□□□□□ -1.16
VBP1-203ENST00000535916 FRS2Q8WU20 508 aa7.78□□□□□ -1.16
VBP1-203ENST00000535916 MRGPRX3Q96LB0 322 aa7.78□□□□□ -1.16
VBP1-203ENST00000535916 GORASP1Q9BQQ3 440 aa7.78□□□□□ -1.16
VBP1-203ENST00000535916 LNPKQ9C0E8 428 aa7.78□□□□□ -1.16
VBP1-203ENST00000535916 NKX2-4Q9H2Z4 354 aa7.78□□□□□ -1.16
VBP1-203ENST00000535916 UNCXA6NJT0 531 aa7.77□□□□□ -1.17
VBP1-203ENST00000535916 SGSM2O43147 1006 aa7.77□□□□□ -1.17
VBP1-203ENST00000535916 NAT2P11245 290 aa7.77□□□□□ -1.17
VBP1-203ENST00000535916 ZNF761Q86XN6 746 aaPredicted RBP7.77□□□□□ -1.17
VBP1-203ENST00000535916 FAM26EQ8N5C1 309 aa7.77□□□□□ -1.17
VBP1-203ENST00000535916 LINC00482Q8N8I6 264 aa7.77□□□□□ -1.17
VBP1-203ENST00000535916 NPLOC4Q8TAT6 608 aa7.77□□□□□ -1.17
VBP1-203ENST00000535916 AP5M1Q9H0R1 490 aa7.77□□□□□ -1.17
VBP1-203ENST00000535916 CYP26B1Q9NR63 512 aa7.77□□□□□ -1.17
VBP1-203ENST00000535916 C22orf46C9J442 243 aa7.76□□□□□ -1.17
VBP1-203ENST00000535916 K7ESM1 405 aa7.76□□□□□ -1.17
VBP1-203ENST00000535916 TBX1O43435 398 aa7.76□□□□□ -1.17
VBP1-203ENST00000535916 FPR2P25090 351 aa7.76□□□□□ -1.17
VBP1-203ENST00000535916 RBM10P98175 930 aaKnown RBP7.76□□□□□ -1.17
VBP1-203ENST00000535916 ETV3LQ6ZN32 361 aa7.76□□□□□ -1.17
VBP1-203ENST00000535916 TTLL7Q6ZT98 887 aa7.76□□□□□ -1.17
VBP1-203ENST00000535916 BTN2A2Q8WVV5 523 aa7.76□□□□□ -1.17
VBP1-203ENST00000535916 C11orf84Q9BUA3 381 aaPredicted RBP7.76□□□□□ -1.17
VBP1-203ENST00000535916 CCSER2Q9H7U1 834 aa7.76□□□□□ -1.17
VBP1-203ENST00000535916 SMARCA5O60264 1052 aaPredicted RBP7.75□□□□□ -1.17
VBP1-203ENST00000535916 HHIPL2Q6UWX4 724 aa7.75□□□□□ -1.17
VBP1-203ENST00000535916 MIB1Q86YT6 1006 aa7.75□□□□□ -1.17
VBP1-203ENST00000535916 ADAMTS17Q8TE56 1095 aa7.75□□□□□ -1.17
VBP1-203ENST00000535916 TMEFF2Q9UIK5 374 aaPredicted RBP7.75□□□□□ -1.17
VBP1-203ENST00000535916 ARNTLO00327 626 aa7.74□□□□□ -1.17
VBP1-203ENST00000535916 SMAD7O15105 426 aaKnown RBP7.74□□□□□ -1.17
VBP1-203ENST00000535916 ATF4P18848 351 aaPredicted RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms