RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 IFIT3O14879 490 aaKnown RBP10.38□□□□□ -0.75
COPB1-211ENST00000534234 SGSM2O43147 1006 aa10.38□□□□□ -0.75
COPB1-211ENST00000534234 B4GALT4O60513 344 aa10.38□□□□□ -0.75
COPB1-211ENST00000534234 PURAQ00577 322 aaKnown RBP10.38□□□□□ -0.75
COPB1-211ENST00000534234 TTLL4Q14679 1199 aa10.38□□□□□ -0.75
COPB1-211ENST00000534234 STXBP2Q15833 593 aa10.38□□□□□ -0.75
COPB1-211ENST00000534234 ZNF365Q70YC5 407 aa10.38□□□□□ -0.75
COPB1-211ENST00000534234 COPS5Q92905 334 aa10.38□□□□□ -0.75
COPB1-211ENST00000534234 RMDN3Q96TC7 470 aa10.38□□□□□ -0.75
COPB1-211ENST00000534234 CDX2Q99626 313 aaPredicted RBP10.38□□□□□ -0.75
COPB1-211ENST00000534234 MTG1Q9BT17 334 aaPredicted RBP10.38□□□□□ -0.75
COPB1-211ENST00000534234 AMNQ9BXJ7 453 aa10.38□□□□□ -0.75
COPB1-211ENST00000534234 ALDH8A1Q9H2A2 487 aaPredicted RBP10.38□□□□□ -0.75
COPB1-211ENST00000534234 COL20A1Q9P218 1284 aa10.38□□□□□ -0.75
COPB1-211ENST00000534234 MAD2L2Q9UI95 211 aa10.38□□□□□ -0.75
COPB1-211ENST00000534234 ERICH2A1L162 156 aa10.37□□□□□ -0.75
COPB1-211ENST00000534234 E7EWF7 191 aa10.37□□□□□ -0.75
COPB1-211ENST00000534234 KPNA6O60684 536 aa10.37□□□□□ -0.75
COPB1-211ENST00000534234 CFBP00751 764 aa10.37□□□□□ -0.75
COPB1-211ENST00000534234 CCL23P55773 120 aa10.37□□□□□ -0.75
COPB1-211ENST00000534234 CCDC62Q6P9F0 684 aa10.37□□□□□ -0.75
COPB1-211ENST00000534234 SEPT14Q6ZU15 432 aa10.37□□□□□ -0.75
COPB1-211ENST00000534234 RALYLQ86SE5 291 aaKnown RBP10.37□□□□□ -0.75
COPB1-211ENST00000534234 NCOA7Q8NI08 942 aa10.37□□□□□ -0.75
COPB1-211ENST00000534234 MAP4K1Q92918 833 aa10.37□□□□□ -0.75
COPB1-211ENST00000534234 IWS1Q96ST2 819 aa10.37□□□□□ -0.75
COPB1-211ENST00000534234 NOC4LQ9BVI4 516 aaKnown RBP10.37□□□□□ -0.75
COPB1-211ENST00000534234 TTYH1Q9H313 450 aaPredicted RBP10.37□□□□□ -0.75
COPB1-211ENST00000534234 IL23AQ9NPF7 189 aa10.37□□□□□ -0.75
COPB1-211ENST00000534234 PCDHA1Q9Y5I3 950 aa10.37□□□□□ -0.75
COPB1-211ENST00000534234 TAF6LQ9Y6J9 622 aa10.37□□□□□ -0.75
COPB1-211ENST00000534234 UMODL1Q5DID0 1318 aa10.37□□□□□ -0.75
COPB1-211ENST00000534234 ZBTB5O15062 677 aa10.36□□□□□ -0.75
COPB1-211ENST00000534234 ARIH2O95376 493 aa10.36□□□□□ -0.75
COPB1-211ENST00000534234 FGBP02675 491 aa10.36□□□□□ -0.75
COPB1-211ENST00000534234 SUPT20HL2P0C7V6 817 aa10.36□□□□□ -0.75
COPB1-211ENST00000534234 WTAPQ15007 396 aa10.36□□□□□ -0.75
COPB1-211ENST00000534234 SART3Q15020 963 aaKnown RBP10.36□□□□□ -0.75
COPB1-211ENST00000534234 LY6KQ17RY6 165 aa10.36□□□□□ -0.75
COPB1-211ENST00000534234 NBPF20Q3BBV1 942 aa10.36□□□□□ -0.75
COPB1-211ENST00000534234 ARHGEF16Q5VV41 709 aa10.36□□□□□ -0.75
COPB1-211ENST00000534234 PSRC1Q6PGN9 363 aaPredicted RBP10.36□□□□□ -0.75
COPB1-211ENST00000534234 CHST3Q7LGC8 479 aa10.36□□□□□ -0.75
COPB1-211ENST00000534234 MTMR8Q96EF0 704 aa10.36□□□□□ -0.75
COPB1-211ENST00000534234 SENP2Q9HC62 589 aa10.36□□□□□ -0.75
COPB1-211ENST00000534234 TRMT13Q9NUP7 481 aaKnown RBP10.36□□□□□ -0.75
COPB1-211ENST00000534234 LTBP2Q14767 1821 aa10.36□□□□□ -0.75
COPB1-211ENST00000534234 TMEM265A0A087WTH1 108 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 DLL1O00548 723 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 OPLAHO14841 1288 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 PPP1R11O60927 126 aaPredicted RBP10.35□□□□□ -0.75
COPB1-211ENST00000534234 EIF3JO75822 258 aaKnown RBP10.35□□□□□ -0.75
COPB1-211ENST00000534234 GH1P01241 217 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 NR3C2P08235 984 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 CYP2C9P11712 490 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 EIF2AK2P19525 551 aaKnown RBP10.35□□□□□ -0.75
COPB1-211ENST00000534234 DNAJB2P25686 324 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 TROAPQ12815 778 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 TRAF1Q13077 416 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 GRM4Q14833 912 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 FAM47CQ5HY64 1035 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 TMEM67Q5HYA8 995 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 RASIP1Q5U651 963 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 STOX1Q6ZVD7 989 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 HOMER1Q86YM7 354 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 PIGSQ96S52 555 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 RIOX1Q9H6W3 641 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 MAP3K20Q9NYL2 800 aaKnown RBP10.35□□□□□ -0.75
COPB1-211ENST00000534234 GRXCR1A8MXD5 290 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 HSD17B4P51659 736 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 CHMP4BP1P59074 171 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 SLC35G1Q2M3R5 365 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 NFRKBQ6P4R8 1299 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 OTOP2Q7RTS6 562 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 CATIPQ7Z7H3 387 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 RPUSD2Q8IZ73 545 aaKnown RBP10.35□□□□□ -0.75
COPB1-211ENST00000534234 IGDCC4Q8TDY8 1250 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 PPP1R13LQ8WUF5 828 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 AFG1LQ8WV93 481 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 MYLIPQ8WY64 445 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 HERVK_113Q902F9 699 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 SCLYQ96I15 445 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 WNT8AQ9H1J5 351 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 MTIF3Q9H2K0 278 aaKnown RBP10.35□□□□□ -0.75
COPB1-211ENST00000534234 ZNF576Q9H609 170 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 PXMP2Q9NR77 195 aa10.35□□□□□ -0.75
COPB1-211ENST00000534234 CXXC1Q9P0U4 656 aaPredicted RBP10.35□□□□□ -0.75
COPB1-211ENST00000534234 DDX41Q9UJV9 622 aaKnown RBP10.35□□□□□ -0.75
COPB1-211ENST00000534234 RBM8AQ9Y5S9 174 aaKnown RBP10.35□□□□□ -0.75
COPB1-211ENST00000534234 CYTH3O43739 400 aa10.34□□□□□ -0.75
COPB1-211ENST00000534234 MYCLP12524 364 aaPredicted RBP10.34□□□□□ -0.75
COPB1-211ENST00000534234 CASTP20810 708 aaKnown RBP10.34□□□□□ -0.75
COPB1-211ENST00000534234 HOXA13P31271 388 aaPredicted RBP10.34□□□□□ -0.75
COPB1-211ENST00000534234 ANTXR2P58335 489 aa10.34□□□□□ -0.75
COPB1-211ENST00000534234 GHRHRQ02643 423 aa10.34□□□□□ -0.75
COPB1-211ENST00000534234 PTPN11Q06124 597 aaPredicted RBP10.34□□□□□ -0.75
COPB1-211ENST00000534234 ARHGAP1Q07960 439 aa10.34□□□□□ -0.75
COPB1-211ENST00000534234 GRIN2CQ14957 1233 aa10.34□□□□□ -0.75
COPB1-211ENST00000534234 MB21D2Q8IYB1 491 aaPredicted RBP10.34□□□□□ -0.75
COPB1-211ENST00000534234 SAMD3Q8N6K7 520 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms