RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 TRIM43BA6NCK2 446 aa35.11■■■■□ 3.21
SSSCA1-207ENST00000533115 CLTBP09497 229 aa35.11■■■■□ 3.21
SSSCA1-207ENST00000533115 SAMD3Q8N6K7 520 aa35.11■■■■□ 3.21
SSSCA1-207ENST00000533115 SCFD2Q8WU76 684 aa35.11■■■■□ 3.21
SSSCA1-207ENST00000533115 TRIM43Q96BQ3 446 aaPredicted RBP35.11■■■■□ 3.21
SSSCA1-207ENST00000533115 LZTS2Q9BRK4 669 aa35.11■■■■□ 3.21
SSSCA1-207ENST00000533115 SPZ1Q9BXG8 430 aa35.11■■■■□ 3.21
SSSCA1-207ENST00000533115 CALM1P0DP23 149 aa35.1■■■■□ 3.21
SSSCA1-207ENST00000533115 CALM2P0DP24 149 aa35.1■■■■□ 3.21
SSSCA1-207ENST00000533115 CALM3P0DP25 149 aa35.1■■■■□ 3.21
SSSCA1-207ENST00000533115 SMARCA1P28370 1054 aa35.1■■■■□ 3.21
SSSCA1-207ENST00000533115 GNAQP50148 359 aa35.1■■■■□ 3.21
SSSCA1-207ENST00000533115 ARHGEF16Q5VV41 709 aa35.1■■■■□ 3.21
SSSCA1-207ENST00000533115 CXCL17Q6UXB2 119 aa35.1■■■■□ 3.21
SSSCA1-207ENST00000533115 SLC12A7Q9Y666 1083 aa35.1■■■■□ 3.21
SSSCA1-207ENST00000533115 LTBP2Q14767 1821 aa35.09■■■■□ 3.21
SSSCA1-207ENST00000533115 DCDC2CA8MYV0 355 aa35.09■■■■□ 3.21
SSSCA1-207ENST00000533115 CABYRO75952 493 aa35.09■■■■□ 3.21
SSSCA1-207ENST00000533115 CDK7P50613 346 aa35.09■■■■□ 3.21
SSSCA1-207ENST00000533115 KRT32Q14532 448 aa35.09■■■■□ 3.21
SSSCA1-207ENST00000533115 PPP2R5BQ15173 497 aa35.09■■■■□ 3.21
SSSCA1-207ENST00000533115 TDHQ8IZJ6 230 aa35.09■■■■□ 3.21
SSSCA1-207ENST00000533115 PIBF1Q8WXW3 757 aa35.09■■■■□ 3.21
SSSCA1-207ENST00000533115 PPP4R2Q9NY27 417 aa35.09■■■■□ 3.21
SSSCA1-207ENST00000533115 MROH7Q68CQ1 1323 aa35.08■■■■□ 3.21
SSSCA1-207ENST00000533115 ARVCFO00192 962 aa35.08■■■■□ 3.21
SSSCA1-207ENST00000533115 NKRFO15226 690 aaKnown RBP eCLIP35.08■■■■□ 3.213e-6■□□□□ 8.1
SSSCA1-207ENST00000533115 EXOSC10Q01780 885 aaKnown RBP35.08■■■■□ 3.21
SSSCA1-207ENST00000533115 STXBP2Q15833 593 aa35.08■■■■□ 3.21
SSSCA1-207ENST00000533115 ADCK5Q3MIX3 580 aa35.08■■■■□ 3.21
SSSCA1-207ENST00000533115 ERICH6BQ5W0A0 696 aa35.08■■■■□ 3.21
SSSCA1-207ENST00000533115 SGMS1Q86VZ5 419 aa35.08■■■■□ 3.21
SSSCA1-207ENST00000533115 PXMP2Q9NR77 195 aa35.08■■■■□ 3.21
SSSCA1-207ENST00000533115 EIF2AK2P19525 551 aaKnown RBP35.07■■■■□ 3.2
SSSCA1-207ENST00000533115 RXRAP19793 462 aa35.07■■■■□ 3.2
SSSCA1-207ENST00000533115 FAAP100Q0VG06 881 aa35.07■■■■□ 3.2
SSSCA1-207ENST00000533115 DHX32Q7L7V1 743 aaKnown RBP35.07■■■■□ 3.2
SSSCA1-207ENST00000533115 OR6J1Q8NGC5 347 aa35.07■■■■□ 3.2
SSSCA1-207ENST00000533115 RRP36Q96EU6 259 aaKnown RBP35.07■■■■□ 3.2
SSSCA1-207ENST00000533115 KIAA0355O15063 1070 aa35.06■■■■□ 3.2
SSSCA1-207ENST00000533115 PLEKHA8P1O95397 391 aa35.06■■■■□ 3.2
SSSCA1-207ENST00000533115 TXNP10599 105 aaKnown RBP35.06■■■■□ 3.2
SSSCA1-207ENST00000533115 TTLL4Q14679 1199 aa35.06■■■■□ 3.2
SSSCA1-207ENST00000533115 TMEM39AQ9NV64 488 aa35.06■■■■□ 3.2
SSSCA1-207ENST00000533115 LAMA3Q16787 3333 aa35.05■■■■□ 3.2
SSSCA1-207ENST00000533115 GCOM1H8Y6P7 765 aaPredicted RBP35.05■■■■□ 3.2
SSSCA1-207ENST00000533115 POLR2MP0CAP2 368 aa35.05■■■■□ 3.2
SSSCA1-207ENST00000533115 HOXA13P31271 388 aaPredicted RBP35.05■■■■□ 3.2
SSSCA1-207ENST00000533115 CPT1AP50416 773 aa35.05■■■■□ 3.2
SSSCA1-207ENST00000533115 RAB11FIP4Q86YS3 637 aa35.05■■■■□ 3.2
SSSCA1-207ENST00000533115 SRBD1Q8N5C6 995 aaKnown RBP35.05■■■■□ 3.2
SSSCA1-207ENST00000533115 BADQ92934 168 aa35.05■■■■□ 3.2
SSSCA1-207ENST00000533115 ARIH2O95376 493 aa35.04■■■■□ 3.2
SSSCA1-207ENST00000533115 NR3C2P08235 984 aa35.04■■■■□ 3.2
SSSCA1-207ENST00000533115 SEPT14Q6ZU15 432 aa35.04■■■■□ 3.2
SSSCA1-207ENST00000533115 FANCBQ8NB91 859 aa35.04■■■■□ 3.2
SSSCA1-207ENST00000533115 COPS5Q92905 334 aa35.04■■■■□ 3.2
SSSCA1-207ENST00000533115 KCNB2Q92953 911 aa35.04■■■■□ 3.2
SSSCA1-207ENST00000533115 TCEANC2Q96MN5 208 aa35.04■■■■□ 3.2
SSSCA1-207ENST00000533115 SEC63Q9UGP8 760 aaKnown RBP35.04■■■■□ 3.2
SSSCA1-207ENST00000533115 ITGB8P26012 769 aa35.03■■■■□ 3.2
SSSCA1-207ENST00000533115 CCDC62Q6P9F0 684 aa35.03■■■■□ 3.2
SSSCA1-207ENST00000533115 SYNE3Q6ZMZ3 975 aa35.03■■■■□ 3.2
SSSCA1-207ENST00000533115 SLC43A3Q8NBI5 491 aa35.03■■■■□ 3.2
SSSCA1-207ENST00000533115 POLR3EQ9NVU0 708 aa35.03■■■■□ 3.2
SSSCA1-207ENST00000533115 EIF3JO75822 258 aaKnown RBP35.02■■■■□ 3.2
SSSCA1-207ENST00000533115 CENPBP07199 599 aaPredicted RBP35.02■■■■□ 3.2
SSSCA1-207ENST00000533115 HMGB1P09429 215 aaKnown RBP35.02■■■■□ 3.2
SSSCA1-207ENST00000533115 ITGA7Q13683 1181 aa35.02■■■■□ 3.2
SSSCA1-207ENST00000533115 MICU3Q86XE3 530 aa35.02■■■■□ 3.2
SSSCA1-207ENST00000533115 CMTR1Q8N1G2 835 aaKnown RBP35.02■■■■□ 3.2
SSSCA1-207ENST00000533115 PDCD2LQ9BRP1 358 aa35.02■■■■□ 3.2
SSSCA1-207ENST00000533115 SZT2Q5T011 3432 aa35.01■■■■□ 3.2
SSSCA1-207ENST00000533115 SOX1O00570 391 aaPredicted RBP35.01■■■■□ 3.2
SSSCA1-207ENST00000533115 REC8O95072 547 aa35.01■■■■□ 3.2
SSSCA1-207ENST00000533115 RAG1P15918 1043 aa35.01■■■■□ 3.2
SSSCA1-207ENST00000533115 HSPA4P34932 840 aa35.01■■■■□ 3.2
SSSCA1-207ENST00000533115 LRIT3Q3SXY7 679 aa35.01■■■■□ 3.2
SSSCA1-207ENST00000533115 BRDTQ58F21 947 aaPredicted RBP35.01■■■■□ 3.2
SSSCA1-207ENST00000533115 FAM126BQ8IXS8 530 aa35.01■■■■□ 3.2
SSSCA1-207ENST00000533115 SEZ6LQ9BYH1 1024 aa35.01■■■■□ 3.2
SSSCA1-207ENST00000533115 TLR3O15455 904 aaKnown RBP35■■■■□ 3.19
SSSCA1-207ENST00000533115 APOA5Q6Q788 366 aa35■■■■□ 3.19
SSSCA1-207ENST00000533115 TMTC3Q6ZXV5 915 aa35■■■■□ 3.19
SSSCA1-207ENST00000533115 KIAA1217Q5T5P2 1943 aa35■■■■□ 3.19
SSSCA1-207ENST00000533115 GRIN2DO15399 1336 aa35■■■■□ 3.19
SSSCA1-207ENST00000533115 A6NJR5 290 aa34.99■■■■□ 3.19
SSSCA1-207ENST00000533115 MYL3P08590 195 aa34.99■■■■□ 3.19
SSSCA1-207ENST00000533115 PSMC6P62333 389 aa34.99■■■■□ 3.19
SSSCA1-207ENST00000533115 PURAQ00577 322 aaKnown RBP34.99■■■■□ 3.19
SSSCA1-207ENST00000533115 PGM5Q15124 567 aa34.99■■■■□ 3.19
SSSCA1-207ENST00000533115 LY6KQ17RY6 165 aa34.99■■■■□ 3.19
SSSCA1-207ENST00000533115 FCHSD1Q86WN1 690 aa34.99■■■■□ 3.19
SSSCA1-207ENST00000533115 TBX21Q9UL17 535 aa34.99■■■■□ 3.19
SSSCA1-207ENST00000533115 MYCLP12524 364 aaPredicted RBP34.98■■■■□ 3.19
SSSCA1-207ENST00000533115 BRPF3Q9ULD4 1205 aa34.98■■■■□ 3.19
SSSCA1-207ENST00000533115 SNX14Q9Y5W7 946 aa34.98■■■■□ 3.19
SSSCA1-207ENST00000533115 VSIG10LQ86VR7 867 aa34.97■■■■□ 3.19
SSSCA1-207ENST00000533115 CCDC82Q8N4S0 544 aa34.97■■■■□ 3.19
SSSCA1-207ENST00000533115 GH1P01241 217 aa34.96■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms