RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 GPCPD1Q9NPB8 672 aa13.59□□□□□ -0.23
CMTM1-216ENST00000533078 ANAPC4Q9UJX5 808 aa13.59□□□□□ -0.23
CMTM1-216ENST00000533078 SCN10AQ9Y5Y9 1956 aa13.58□□□□□ -0.24
CMTM1-216ENST00000533078 SCN5AQ14524 2016 aa13.58□□□□□ -0.24
CMTM1-216ENST00000533078 A6NJR5 290 aa13.58□□□□□ -0.24
CMTM1-216ENST00000533078 RFXAPO00287 272 aa13.58□□□□□ -0.24
CMTM1-216ENST00000533078 ORC4O43929 436 aa13.58□□□□□ -0.24
CMTM1-216ENST00000533078 MX1P20591 662 aa13.58□□□□□ -0.24
CMTM1-216ENST00000533078 RPS6P62753 249 aaKnown RBP13.58□□□□□ -0.24
CMTM1-216ENST00000533078 TAP1Q03518 808 aa13.58□□□□□ -0.24
CMTM1-216ENST00000533078 SLC30A10Q6XR72 485 aa13.58□□□□□ -0.24
CMTM1-216ENST00000533078 CRBNQ96SW2 442 aa13.58□□□□□ -0.24
CMTM1-216ENST00000533078 FRMPD2Q68DX3 1309 aaPredicted RBP13.58□□□□□ -0.24
CMTM1-216ENST00000533078 TANC1Q9C0D5 1861 aa13.57□□□□□ -0.24
CMTM1-216ENST00000533078 LCTP09848 1927 aa13.57□□□□□ -0.24
CMTM1-216ENST00000533078 EFCAB14O75071 495 aa13.57□□□□□ -0.24
CMTM1-216ENST00000533078 PTGISQ16647 500 aa13.57□□□□□ -0.24
CMTM1-216ENST00000533078 TMEM31Q5JXX7 168 aa13.57□□□□□ -0.24
CMTM1-216ENST00000533078 C20orf194Q5TEA3 1177 aa13.57□□□□□ -0.24
CMTM1-216ENST00000533078 TTBK2Q6IQ55 1244 aa13.57□□□□□ -0.24
CMTM1-216ENST00000533078 RASGRP2Q7LDG7 609 aa13.57□□□□□ -0.24
CMTM1-216ENST00000533078 PI4K2BQ8TCG2 481 aa13.57□□□□□ -0.24
CMTM1-216ENST00000533078 TMEM47Q9BQJ4 181 aa13.57□□□□□ -0.24
CMTM1-216ENST00000533078 ARIH1Q9Y4X5 557 aaPredicted RBP13.57□□□□□ -0.24
CMTM1-216ENST00000533078 WDR19Q8NEZ3 1342 aa13.57□□□□□ -0.24
CMTM1-216ENST00000533078 PCP11498 1178 aaKnown RBP13.56□□□□□ -0.24
CMTM1-216ENST00000533078 CASTP20810 708 aaKnown RBP13.56□□□□□ -0.24
CMTM1-216ENST00000533078 NOVP48745 357 aa13.56□□□□□ -0.24
CMTM1-216ENST00000533078 GPATCH4Q5T3I0 446 aaKnown RBP13.56□□□□□ -0.24
CMTM1-216ENST00000533078 DIEXFQ68CQ4 756 aaKnown RBP13.56□□□□□ -0.24
CMTM1-216ENST00000533078 INCENPQ9NQS7 918 aa13.56□□□□□ -0.24
CMTM1-216ENST00000533078 TCP11L1Q9NUJ3 509 aa13.56□□□□□ -0.24
CMTM1-216ENST00000533078 LMCD1Q9NZU5 365 aa13.56□□□□□ -0.24
CMTM1-216ENST00000533078 GH1P01241 217 aa13.55□□□□□ -0.24
CMTM1-216ENST00000533078 PDHBP11177 359 aa13.55□□□□□ -0.24
CMTM1-216ENST00000533078 SELPP16109 830 aa13.55□□□□□ -0.24
CMTM1-216ENST00000533078 EDNRBP24530 442 aa13.55□□□□□ -0.24
CMTM1-216ENST00000533078 GRB10Q13322 594 aa13.55□□□□□ -0.24
CMTM1-216ENST00000533078 ALX1Q15699 326 aa13.55□□□□□ -0.24
CMTM1-216ENST00000533078 USH1GQ495M9 461 aa13.55□□□□□ -0.24
CMTM1-216ENST00000533078 CNKSR3Q6P9H4 555 aa13.55□□□□□ -0.24
CMTM1-216ENST00000533078 LRRC8DQ7L1W4 858 aa13.55□□□□□ -0.24
CMTM1-216ENST00000533078 CLEC4DQ8WXI8 215 aa13.55□□□□□ -0.24
CMTM1-216ENST00000533078 EVI5LQ96CN4 794 aa13.55□□□□□ -0.24
CMTM1-216ENST00000533078 VWCEQ96DN2 955 aa13.55□□□□□ -0.24
CMTM1-216ENST00000533078 TTC14Q96N46 770 aa13.55□□□□□ -0.24
CMTM1-216ENST00000533078 KATNAL1Q9BW62 490 aa13.55□□□□□ -0.24
CMTM1-216ENST00000533078 MAF1Q9H063 256 aa13.55□□□□□ -0.24
CMTM1-216ENST00000533078 RNF41Q9H4P4 317 aaPredicted RBP13.55□□□□□ -0.24
CMTM1-216ENST00000533078 HELLSQ9NRZ9 838 aa13.55□□□□□ -0.24
CMTM1-216ENST00000533078 EPOPA6NHQ4 379 aa13.54□□□□□ -0.24
CMTM1-216ENST00000533078 WDR5P61964 334 aaKnown RBP13.54□□□□□ -0.24
CMTM1-216ENST00000533078 ZNF543Q08ER8 600 aa13.54□□□□□ -0.24
CMTM1-216ENST00000533078 DGKDQ16760 1214 aa13.54□□□□□ -0.24
CMTM1-216ENST00000533078 MFSD6Q6ZSS7 791 aa13.54□□□□□ -0.24
CMTM1-216ENST00000533078 SESTD1Q86VW0 696 aa13.54□□□□□ -0.24
CMTM1-216ENST00000533078 MCF2L2Q86YR7 1114 aa13.54□□□□□ -0.24
CMTM1-216ENST00000533078 C7orf31Q8N865 590 aa13.54□□□□□ -0.24
CMTM1-216ENST00000533078 RGS22Q8NE09 1264 aa13.54□□□□□ -0.24
CMTM1-216ENST00000533078 COPS5Q92905 334 aa13.54□□□□□ -0.24
CMTM1-216ENST00000533078 LRFN3Q9BTN0 628 aa13.54□□□□□ -0.24
CMTM1-216ENST00000533078 TRIP12Q14669 1992 aaPredicted RBP13.54□□□□□ -0.24
CMTM1-216ENST00000533078 ABHD14A-ACY1A0A1B0GW23 586 aa13.53□□□□□ -0.24
CMTM1-216ENST00000533078 FGAP02671 866 aa13.53□□□□□ -0.24
CMTM1-216ENST00000533078 MMP3P08254 477 aa13.53□□□□□ -0.24
CMTM1-216ENST00000533078 FGRP09769 529 aa13.53□□□□□ -0.24
CMTM1-216ENST00000533078 MFAP1P55081 439 aaKnown RBP13.53□□□□□ -0.24
CMTM1-216ENST00000533078 IKBKEQ14164 716 aa13.53□□□□□ -0.24
CMTM1-216ENST00000533078 STXBP2Q15833 593 aa13.53□□□□□ -0.24
CMTM1-216ENST00000533078 MCMDC2Q4G0Z9 681 aa13.53□□□□□ -0.24
CMTM1-216ENST00000533078 CCDC178Q5BJE1 867 aa13.53□□□□□ -0.24
CMTM1-216ENST00000533078 VPS53Q5VIR6 699 aa13.53□□□□□ -0.24
CMTM1-216ENST00000533078 KRT40Q6A162 431 aa13.53□□□□□ -0.24
CMTM1-216ENST00000533078 SEPT14Q6ZU15 432 aa13.53□□□□□ -0.24
CMTM1-216ENST00000533078 CHST3Q7LGC8 479 aa13.53□□□□□ -0.24
CMTM1-216ENST00000533078 NSUN6Q8TEA1 469 aaKnown RBP13.53□□□□□ -0.24
CMTM1-216ENST00000533078 PPP1R13LQ8WUF5 828 aa13.53□□□□□ -0.24
CMTM1-216ENST00000533078 AFG1LQ8WV93 481 aa13.53□□□□□ -0.24
CMTM1-216ENST00000533078 TGS1Q96RS0 853 aaKnown RBP13.53□□□□□ -0.24
CMTM1-216ENST00000533078 IWS1Q96ST2 819 aa13.53□□□□□ -0.24
CMTM1-216ENST00000533078 RAD9AQ99638 391 aa13.53□□□□□ -0.24
CMTM1-216ENST00000533078 ABCB11O95342 1321 aa13.53□□□□□ -0.24
CMTM1-216ENST00000533078 DHX16O60231 1041 aaKnown RBP13.52□□□□□ -0.25
CMTM1-216ENST00000533078 NT5C2P49902 561 aa13.52□□□□□ -0.25
CMTM1-216ENST00000533078 GDF6Q6KF10 455 aaPredicted RBP13.52□□□□□ -0.25
CMTM1-216ENST00000533078 IQCA1Q86XH1 822 aa13.52□□□□□ -0.25
CMTM1-216ENST00000533078 TICAM2Q86XR7 235 aa13.52□□□□□ -0.25
CMTM1-216ENST00000533078 OTUD7AQ8TE49 926 aaPredicted RBP13.52□□□□□ -0.25
CMTM1-216ENST00000533078 GDPD5Q8WTR4 605 aa13.52□□□□□ -0.25
CMTM1-216ENST00000533078 ESR2Q92731 530 aa13.52□□□□□ -0.25
CMTM1-216ENST00000533078 EPHX3Q9H6B9 360 aa13.52□□□□□ -0.25
CMTM1-216ENST00000533078 CTNNA3Q9UI47 895 aa13.52□□□□□ -0.25
CMTM1-216ENST00000533078 MTUS1Q9ULD2 1270 aa13.52□□□□□ -0.25
CMTM1-216ENST00000533078 ZMYM6O95789 1325 aa13.52□□□□□ -0.25
CMTM1-216ENST00000533078 TET1Q8NFU7 2136 aa13.52□□□□□ -0.25
CMTM1-216ENST00000533078 EMSYQ7Z589 1322 aa13.51□□□□□ -0.25
CMTM1-216ENST00000533078 FOXP2O15409 715 aa13.51□□□□□ -0.25
CMTM1-216ENST00000533078 GPR37L1O60883 481 aa13.51□□□□□ -0.25
CMTM1-216ENST00000533078 ARIH2O95376 493 aa13.51□□□□□ -0.25
CMTM1-216ENST00000533078 GJB5O95377 273 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms