RNA–Protein interactions for RNA: ENST00000533062.5

CHORDC1-208, Transcript of cysteine and histidine rich domain containing 1, human

TSL 4

Gene CHORDC1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHORDC1-208	ENST00000533062	HMGB1	P09429	215 aa	Known RBP	13.28	□□□□□ -0.28
CHORDC1-208	ENST00000533062	CAST	P20810	708 aa	Known RBP	13.28	□□□□□ -0.28
CHORDC1-208	ENST00000533062	RPS6KB1	P23443	525 aa		13.28	□□□□□ -0.28
CHORDC1-208	ENST00000533062	GNAQ	P50148	359 aa		13.28	□□□□□ -0.28
CHORDC1-208	ENST00000533062	HSD17B4	P51659	736 aa		13.28	□□□□□ -0.28
CHORDC1-208	ENST00000533062	SEPT14	Q6ZU15	432 aa		13.28	□□□□□ -0.28
CHORDC1-208	ENST00000533062	FCHSD1	Q86WN1	690 aa		13.28	□□□□□ -0.28
CHORDC1-208	ENST00000533062	COPS5	Q92905	334 aa		13.28	□□□□□ -0.28
CHORDC1-208	ENST00000533062	BRF1	Q92994	677 aa		13.28	□□□□□ -0.28
CHORDC1-208	ENST00000533062	VTI1A	Q96AJ9	217 aa		13.28	□□□□□ -0.28
CHORDC1-208	ENST00000533062	MPHOSPH6	Q99547	160 aa	Known RBP	13.28	□□□□□ -0.28
CHORDC1-208	ENST00000533062	AP5M1	Q9H0R1	490 aa		13.28	□□□□□ -0.28
CHORDC1-208	ENST00000533062	PXMP2	Q9NR77	195 aa		13.28	□□□□□ -0.28
CHORDC1-208	ENST00000533062	RBM27	Q9P2N5	1060 aa	Known RBP	13.28	□□□□□ -0.28
CHORDC1-208	ENST00000533062	SEC63	Q9UGP8	760 aa	Known RBP	13.28	□□□□□ -0.28
CHORDC1-208	ENST00000533062	SZT2	Q5T011	3432 aa		13.27	□□□□□ -0.28
CHORDC1-208	ENST00000533062	MYH6	P13533	1939 aa		13.27	□□□□□ -0.28
CHORDC1-208	ENST00000533062	LOC102724159	A0A0B4J2E5	919 aa		13.27	□□□□□ -0.29
CHORDC1-208	ENST00000533062	RBM47	A0AV96	593 aa	Known RBP	13.27	□□□□□ -0.29
CHORDC1-208	ENST00000533062	GOLGA8A	A7E2F4	631 aa		13.27	□□□□□ -0.29
CHORDC1-208	ENST00000533062	GOLGA8B	A8MQT2	603 aa		13.27	□□□□□ -0.29
CHORDC1-208	ENST00000533062	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.27	□□□□□ -0.29
CHORDC1-208	ENST00000533062	ARIH2	O95376	493 aa		13.27	□□□□□ -0.29
CHORDC1-208	ENST00000533062	POLR2M	P0CAP2	368 aa		13.27	□□□□□ -0.29
CHORDC1-208	ENST00000533062	MYCL	P12524	364 aa	Predicted RBP	13.27	□□□□□ -0.29
CHORDC1-208	ENST00000533062	CST5	P28325	142 aa	Predicted RBP	13.27	□□□□□ -0.29
CHORDC1-208	ENST00000533062	CDC27	P30260	824 aa		13.27	□□□□□ -0.29
CHORDC1-208	ENST00000533062	TLE2	Q04725	743 aa		13.27	□□□□□ -0.29
CHORDC1-208	ENST00000533062	PWP2	Q15269	919 aa	Known RBP	13.27	□□□□□ -0.29
CHORDC1-208	ENST00000533062	FSCN1	Q16658	493 aa	Known RBP	13.27	□□□□□ -0.29
CHORDC1-208	ENST00000533062	RTN1	Q16799	776 aa		13.27	□□□□□ -0.29
CHORDC1-208	ENST00000533062	DUSP28	Q4G0W2	176 aa		13.27	□□□□□ -0.29
CHORDC1-208	ENST00000533062	HABP4	Q5JVS0	413 aa	Known RBP	13.27	□□□□□ -0.29
CHORDC1-208	ENST00000533062	CXCL17	Q6UXB2	119 aa		13.27	□□□□□ -0.29
CHORDC1-208	ENST00000533062	IL31RA	Q8NI17	732 aa		13.27	□□□□□ -0.29
CHORDC1-208	ENST00000533062	TSEN34	Q9BSV6	310 aa	Known RBP	13.27	□□□□□ -0.29
CHORDC1-208	ENST00000533062	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.27	□□□□□ -0.29
CHORDC1-208	ENST00000533062	STARD7	Q9NQZ5	370 aa		13.27	□□□□□ -0.29
CHORDC1-208	ENST00000533062	MOXD2P	A6NHM9	499 aa		13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062		B4DLN1	442 aa		13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	PQBP1	O60828	265 aa	Known RBP	13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	PPFIA3	O75145	1194 aa		13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	NR3C2	P08235	984 aa		13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	TXN	P10599	105 aa	Known RBP	13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	PSMA5	P28066	241 aa		13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	SMARCA1	P28370	1054 aa		13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	ADD1	P35611	737 aa	Known RBP	13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	MAGEA10	P43363	369 aa	Predicted RBP	13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	MRPL12	P52815	198 aa	Known RBP	13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	MDM2	Q00987	491 aa	Predicted RBP	13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	GHRHR	Q02643	423 aa		13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	SNX17	Q15036	470 aa		13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	PPP2R5B	Q15173	497 aa		13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	STXBP2	Q15833	593 aa		13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	LY6K	Q17RY6	165 aa		13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	USP17L6P	Q6QN14	398 aa		13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	HEATR3	Q7Z4Q2	680 aa		13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	SH3RF1	Q7Z6J0	888 aa		13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	PCSK9	Q8NBP7	692 aa	Known RBP	13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	OR6J1	Q8NGC5	347 aa		13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	SCFD2	Q8WU76	684 aa		13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	LARP6	Q9BRS8	491 aa	Known RBP	13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	MAF1	Q9H063	256 aa		13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.26	□□□□□ -0.29
CHORDC1-208	ENST00000533062	CNTNAP5	Q8WYK1	1306 aa		13.25	□□□□□ -0.29
CHORDC1-208	ENST00000533062	PSMC6	P62333	389 aa		13.25	□□□□□ -0.29
CHORDC1-208	ENST00000533062	FUT2	Q10981	343 aa		13.25	□□□□□ -0.29
CHORDC1-208	ENST00000533062	TRAF1	Q13077	416 aa		13.25	□□□□□ -0.29
CHORDC1-208	ENST00000533062	PGM5	Q15124	567 aa		13.25	□□□□□ -0.29
CHORDC1-208	ENST00000533062	PPP1R13L	Q8WUF5	828 aa		13.25	□□□□□ -0.29
CHORDC1-208	ENST00000533062	GLT1D1	Q96MS3	346 aa		13.25	□□□□□ -0.29
CHORDC1-208	ENST00000533062	IWS1	Q96ST2	819 aa		13.25	□□□□□ -0.29
CHORDC1-208	ENST00000533062	PDCD2L	Q9BRP1	358 aa		13.25	□□□□□ -0.29
CHORDC1-208	ENST00000533062	UPF3B	Q9BZI7	483 aa	Known RBP	13.25	□□□□□ -0.29
CHORDC1-208	ENST00000533062	RBM28	Q9NW13	759 aa	Known RBP	13.25	□□□□□ -0.29
CHORDC1-208	ENST00000533062	TRIM43B	A6NCK2	446 aa		13.24	□□□□□ -0.29
CHORDC1-208	ENST00000533062	SORBS3	O60504	671 aa		13.24	□□□□□ -0.29
CHORDC1-208	ENST00000533062	MYL3	P08590	195 aa		13.24	□□□□□ -0.29
CHORDC1-208	ENST00000533062	METAP2	P50579	478 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
CHORDC1-208	ENST00000533062	NKX3-2	P78367	333 aa		13.24	□□□□□ -0.29
CHORDC1-208	ENST00000533062	TTLL4	Q14679	1199 aa		13.24	□□□□□ -0.29
CHORDC1-208	ENST00000533062	UBE2S	Q16763	222 aa		13.24	□□□□□ -0.29
CHORDC1-208	ENST00000533062	C1orf53	Q5VUE5	145 aa		13.24	□□□□□ -0.29
CHORDC1-208	ENST00000533062	CCDC62	Q6P9F0	684 aa		13.24	□□□□□ -0.29
CHORDC1-208	ENST00000533062	RUFY3	Q7L099	469 aa		13.24	□□□□□ -0.29
CHORDC1-208	ENST00000533062	SMARCC2	Q8TAQ2	1214 aa		13.24	□□□□□ -0.29
CHORDC1-208	ENST00000533062	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.24	□□□□□ -0.29
CHORDC1-208	ENST00000533062	GDF15	Q99988	308 aa		13.24	□□□□□ -0.29
CHORDC1-208	ENST00000533062	PRO3102	Q9H379	93 aa		13.24	□□□□□ -0.29
CHORDC1-208	ENST00000533062	ZSWIM6	Q9HCJ5	1215 aa		13.24	□□□□□ -0.29
CHORDC1-208	ENST00000533062	PDLIM7	Q9NR12	457 aa		13.24	□□□□□ -0.29
CHORDC1-208	ENST00000533062	MAP3K20	Q9NYL2	800 aa	Known RBP	13.24	□□□□□ -0.29
CHORDC1-208	ENST00000533062	PRKAG2	Q9UGJ0	569 aa		13.24	□□□□□ -0.29
CHORDC1-208	ENST00000533062		Q9Y3F1	56 aa		13.24	□□□□□ -0.29
CHORDC1-208	ENST00000533062		V9GY48	417 aa	Predicted RBP	13.24	□□□□□ -0.29
CHORDC1-208	ENST00000533062	LAMA2	P24043	3122 aa	Known RBP	13.24	□□□□□ -0.29
CHORDC1-208	ENST00000533062	ELP1	O95163	1332 aa		13.23	□□□□□ -0.29
CHORDC1-208	ENST00000533062	MEIS2	O14770	477 aa		13.23	□□□□□ -0.29
CHORDC1-208	ENST00000533062	EIF3J	O75822	258 aa	Known RBP	13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms