RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 CFBP00751 764 aa20.72■□□□□ 0.91
SMG1-203ENST00000532700 EIF2AK2P19525 551 aaKnown RBP20.72■□□□□ 0.91
SMG1-203ENST00000532700 HOXA13P31271 388 aaPredicted RBP20.72■□□□□ 0.91
SMG1-203ENST00000532700 HSD17B4P51659 736 aa20.72■□□□□ 0.91
SMG1-203ENST00000532700 PURAQ00577 322 aaKnown RBP20.72■□□□□ 0.91
SMG1-203ENST00000532700 ITGA7Q13683 1181 aa20.72■□□□□ 0.91
SMG1-203ENST00000532700 PWP2Q15269 919 aaKnown RBP20.72■□□□□ 0.91
SMG1-203ENST00000532700 CCDC62Q6P9F0 684 aa20.72■□□□□ 0.91
SMG1-203ENST00000532700 DEFB123Q8N688 67 aa20.72■□□□□ 0.91
SMG1-203ENST00000532700 OR6J1Q8NGC5 347 aa20.72■□□□□ 0.91
SMG1-203ENST00000532700 ZFP91Q96JP5 570 aaPredicted RBP20.72■□□□□ 0.91
SMG1-203ENST00000532700 AMNQ9BXJ7 453 aa20.72■□□□□ 0.91
SMG1-203ENST00000532700 LRRC2Q9BYS8 371 aa20.72■□□□□ 0.91
SMG1-203ENST00000532700 DOCK5Q9H7D0 1870 aa20.71■□□□□ 0.91
SMG1-203ENST00000532700 MYH7BA7E2Y1 1941 aa20.71■□□□□ 0.91
SMG1-203ENST00000532700 SH2B2O14492 632 aaPredicted RBP20.71■□□□□ 0.91
SMG1-203ENST00000532700 PRC1O43663 620 aa20.71■□□□□ 0.91
SMG1-203ENST00000532700 B4GALT4O60513 344 aa20.71■□□□□ 0.91
SMG1-203ENST00000532700 TIMP1P01033 207 aa20.71■□□□□ 0.91
SMG1-203ENST00000532700 RXRAP19793 462 aa20.71■□□□□ 0.91
SMG1-203ENST00000532700 CYP2C18P33260 490 aa20.71■□□□□ 0.91
SMG1-203ENST00000532700 GHRHRQ02643 423 aa20.71■□□□□ 0.91
SMG1-203ENST00000532700 ANO2Q9NQ90 1003 aa20.71■□□□□ 0.91
SMG1-203ENST00000532700 MRPL11Q9Y3B7 192 aaKnown RBP20.71■□□□□ 0.91
SMG1-203ENST00000532700 PCDHA1Q9Y5I3 950 aa20.71■□□□□ 0.91
SMG1-203ENST00000532700 SCN5AQ14524 2016 aa20.71■□□□□ 0.91
SMG1-203ENST00000532700 RGS20O76081 388 aa20.7■□□□□ 0.9
SMG1-203ENST00000532700 PLEKHA8P1O95397 391 aa20.7■□□□□ 0.9
SMG1-203ENST00000532700 MYL3P08590 195 aa20.7■□□□□ 0.9
SMG1-203ENST00000532700 TXNP10599 105 aaKnown RBP20.7■□□□□ 0.9
SMG1-203ENST00000532700 FPGSQ05932 587 aa20.7■□□□□ 0.9
SMG1-203ENST00000532700 PPP2R5BQ15173 497 aa20.7■□□□□ 0.9
SMG1-203ENST00000532700 LY6KQ17RY6 165 aa20.7■□□□□ 0.9
SMG1-203ENST00000532700 FAM109BQ6ICB4 259 aaPredicted RBP20.7■□□□□ 0.9
SMG1-203ENST00000532700 SEPT14Q6ZU15 432 aa20.7■□□□□ 0.9
SMG1-203ENST00000532700 ZNF654Q8IZM8 581 aa20.7■□□□□ 0.9
SMG1-203ENST00000532700 CMTR1Q8N1G2 835 aaKnown RBP20.7■□□□□ 0.9
SMG1-203ENST00000532700 SCFD2Q8WU76 684 aa20.7■□□□□ 0.9
SMG1-203ENST00000532700 CCDC136Q96JN2 1154 aa20.7■□□□□ 0.9
SMG1-203ENST00000532700 RMDN3Q96TC7 470 aa20.7■□□□□ 0.9
SMG1-203ENST00000532700 PXMP2Q9NR77 195 aa20.7■□□□□ 0.9
SMG1-203ENST00000532700 MTMR10Q9NXD2 777 aa20.7■□□□□ 0.9
SMG1-203ENST00000532700 COL6A3P12111 3177 aa20.69■□□□□ 0.9
SMG1-203ENST00000532700 GBF1Q92538 1859 aa20.69■□□□□ 0.9
SMG1-203ENST00000532700 CSF2RAP15509 400 aa20.69■□□□□ 0.9
SMG1-203ENST00000532700 ARHGAP1Q07960 439 aa20.69■□□□□ 0.9
SMG1-203ENST00000532700 ERICH6BQ5W0A0 696 aa20.69■□□□□ 0.9
SMG1-203ENST00000532700 VWCEQ96DN2 955 aa20.69■□□□□ 0.9
SMG1-203ENST00000532700 FAM161BQ96MY7 647 aa20.69■□□□□ 0.9
SMG1-203ENST00000532700 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.69■□□□□ 0.9
SMG1-203ENST00000532700 MROH7Q68CQ1 1323 aa20.69■□□□□ 0.9
SMG1-203ENST00000532700 ERICH2A1L162 156 aa20.68■□□□□ 0.9
SMG1-203ENST00000532700 ACRP10323 421 aa20.68■□□□□ 0.9
SMG1-203ENST00000532700 MFSD5Q6N075 450 aa20.68■□□□□ 0.9
SMG1-203ENST00000532700 GPR153Q6NV75 609 aa20.68■□□□□ 0.9
SMG1-203ENST00000532700 MCF2L2Q86YR7 1114 aa20.68■□□□□ 0.9
SMG1-203ENST00000532700 RASEFQ8IZ41 740 aa20.68■□□□□ 0.9
SMG1-203ENST00000532700 NSUN6Q8TEA1 469 aaKnown RBP20.68■□□□□ 0.9
SMG1-203ENST00000532700 GPKOWQ92917 476 aaPredicted RBP eCLIP20.68■□□□□ 0.9
SMG1-203ENST00000532700 TCEANC2Q96MN5 208 aa20.68■□□□□ 0.9
SMG1-203ENST00000532700 WNT8AQ9H1J5 351 aa20.68■□□□□ 0.9
SMG1-203ENST00000532700 TRMT13Q9NUP7 481 aaKnown RBP20.68■□□□□ 0.9
SMG1-203ENST00000532700 TANC1Q9C0D5 1861 aa20.67■□□□□ 0.9
SMG1-203ENST00000532700 A6NJR5 290 aa20.67■□□□□ 0.9
SMG1-203ENST00000532700 CABYRO75952 493 aa20.67■□□□□ 0.9
SMG1-203ENST00000532700 NR3C2P08235 984 aa20.67■□□□□ 0.9
SMG1-203ENST00000532700 ADCK5Q3MIX3 580 aa20.67■□□□□ 0.9
SMG1-203ENST00000532700 CATIPQ7Z7H3 387 aa20.67■□□□□ 0.9
SMG1-203ENST00000532700 GUCD1Q96NT3 240 aa20.67■□□□□ 0.9
SMG1-203ENST00000532700 PDCD2LQ9BRP1 358 aa20.67■□□□□ 0.9
SMG1-203ENST00000532700 NOC4LQ9BVI4 516 aaKnown RBP20.67■□□□□ 0.9
SMG1-203ENST00000532700 ALDH8A1Q9H2A2 487 aaPredicted RBP20.67■□□□□ 0.9
SMG1-203ENST00000532700 SORBS3O60504 671 aa20.66■□□□□ 0.9
SMG1-203ENST00000532700 SART3Q15020 963 aaKnown RBP20.66■□□□□ 0.9
SMG1-203ENST00000532700 ARHGEF16Q5VV41 709 aa20.66■□□□□ 0.9
SMG1-203ENST00000532700 SRBD1Q8N5C6 995 aaKnown RBP20.66■□□□□ 0.9
SMG1-203ENST00000532700 AFG1LQ8WV93 481 aa20.66■□□□□ 0.9
SMG1-203ENST00000532700 RNPC3Q96LT9 517 aaKnown RBP20.66■□□□□ 0.9
SMG1-203ENST00000532700 BCAS3Q9H6U6 928 aa20.66■□□□□ 0.9
SMG1-203ENST00000532700 PNMA6FA0A0J9YX94 578 aa20.65■□□□□ 0.9
SMG1-203ENST00000532700 hCG_1642624A0A1W2PR95 340 aa20.65■□□□□ 0.9
SMG1-203ENST00000532700 DDAH1O94760 285 aa20.65■□□□□ 0.9
SMG1-203ENST00000532700 CYP2C9P11712 490 aa20.65■□□□□ 0.9
SMG1-203ENST00000532700 MCM5P33992 734 aa20.65■□□□□ 0.9
SMG1-203ENST00000532700 CPT1AP50416 773 aa20.65■□□□□ 0.9
SMG1-203ENST00000532700 TTLL4Q14679 1199 aa20.65■□□□□ 0.9
SMG1-203ENST00000532700 PGM5Q15124 567 aa20.65■□□□□ 0.9
SMG1-203ENST00000532700 STXBP2Q15833 593 aa20.65■□□□□ 0.9
SMG1-203ENST00000532700 NBPF20Q3BBV1 942 aa20.65■□□□□ 0.9
SMG1-203ENST00000532700 TMEM240Q5SV17 173 aa20.65■□□□□ 0.9
SMG1-203ENST00000532700 TTYH1Q9H313 450 aaPredicted RBP20.65■□□□□ 0.9
SMG1-203ENST00000532700 DDX41Q9UJV9 622 aaKnown RBP20.65■□□□□ 0.9
SMG1-203ENST00000532700 CDH23Q9H251 3354 aa20.64■□□□□ 0.89
SMG1-203ENST00000532700 NKRFO15226 690 aaKnown RBP eCLIP20.64■□□□□ 0.891e-7■■□□□ 13.5
SMG1-203ENST00000532700 TLR3O15455 904 aaKnown RBP20.64■□□□□ 0.89
SMG1-203ENST00000532700 ZEB2O60315 1214 aa20.64■□□□□ 0.89
SMG1-203ENST00000532700 MMP3P08254 477 aa20.64■□□□□ 0.89
SMG1-203ENST00000532700 MYCLP12524 364 aaPredicted RBP20.64■□□□□ 0.89
SMG1-203ENST00000532700 CCL23P55773 120 aa20.64■□□□□ 0.89
SMG1-203ENST00000532700 SP2Q02086 613 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms