RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 FCER1AP12319 257 aa17.08■□□□□ 0.32
SRPRA-206ENST00000532259 STAT2P52630 851 aa17.08■□□□□ 0.32
SRPRA-206ENST00000532259 PRAMEF18Q5VWM3 479 aa17.08■□□□□ 0.32
SRPRA-206ENST00000532259 PPP4R3AQ6IN85 833 aa17.08■□□□□ 0.32
SRPRA-206ENST00000532259 FCHSD1Q86WN1 690 aa17.08■□□□□ 0.32
SRPRA-206ENST00000532259 MICALL2Q8IY33 904 aa17.08■□□□□ 0.32
SRPRA-206ENST00000532259 CCDC150Q8NCX0 1101 aa17.08■□□□□ 0.32
SRPRA-206ENST00000532259 RMND1Q9NWS8 449 aa17.08■□□□□ 0.32
SRPRA-206ENST00000532259 FXR2P51116 673 aaKnown RBP eCLIP17.07■□□□□ 0.325e-12■■□□□ 14.1
SRPRA-206ENST00000532259 SLC30A10Q6XR72 485 aa17.07■□□□□ 0.32
SRPRA-206ENST00000532259 FAM83AQ86UY5 434 aa17.07■□□□□ 0.32
SRPRA-206ENST00000532259 CYP2W1Q8TAV3 490 aa17.07■□□□□ 0.32
SRPRA-206ENST00000532259 ZFP91Q96JP5 570 aaPredicted RBP17.07■□□□□ 0.32
SRPRA-206ENST00000532259 TEPSINQ96N21 525 aa17.07■□□□□ 0.32
SRPRA-206ENST00000532259 TRIM9Q9C026 710 aa17.07■□□□□ 0.32
SRPRA-206ENST00000532259 TNNT1P13805 278 aa17.07■□□□□ 0.32
SRPRA-206ENST00000532259 STAT3P40763 770 aa17.07■□□□□ 0.32
SRPRA-206ENST00000532259 PTGER2P43116 358 aa17.07■□□□□ 0.32
SRPRA-206ENST00000532259 PDE4DQ08499 809 aa17.07■□□□□ 0.32
SRPRA-206ENST00000532259 BTNL9Q6UXG8 535 aa17.07■□□□□ 0.32
SRPRA-206ENST00000532259 VPS16Q9H269 839 aa17.07■□□□□ 0.32
SRPRA-206ENST00000532259 PRR16Q569H4 304 aa17.06■□□□□ 0.32
SRPRA-206ENST00000532259 FKBP1CQ5VVH2 108 aa17.06■□□□□ 0.32
SRPRA-206ENST00000532259 PHF20L1A8MW92 1017 aa17.06■□□□□ 0.32
SRPRA-206ENST00000532259 SSBP05455 408 aaKnown RBP eCLIP17.06■□□□□ 0.32
SRPRA-206ENST00000532259 ARHGAP4P98171 946 aa17.06■□□□□ 0.32
SRPRA-206ENST00000532259 STK4Q13043 487 aa17.06■□□□□ 0.32
SRPRA-206ENST00000532259 CDKAL1Q5VV42 579 aa17.06■□□□□ 0.32
SRPRA-206ENST00000532259 SPECC1LQ69YQ0 1117 aa17.06■□□□□ 0.32
SRPRA-206ENST00000532259 TAB2Q9NYJ8 693 aa17.06■□□□□ 0.32
SRPRA-206ENST00000532259 PCDHA12Q9UN75 941 aa17.06■□□□□ 0.32
SRPRA-206ENST00000532259 FAM86B1E9PN63 330 aa17.05■□□□□ 0.32
SRPRA-206ENST00000532259 PES1O00541 588 aaKnown RBP17.05■□□□□ 0.32
SRPRA-206ENST00000532259 FAM86B2P0C5J1 330 aa17.05■□□□□ 0.32
SRPRA-206ENST00000532259 UBXN2AP68543 259 aa17.05■□□□□ 0.32
SRPRA-206ENST00000532259 NR1I3Q14994 352 aa17.05■□□□□ 0.32
SRPRA-206ENST00000532259 TNIP1Q15025 636 aa17.05■□□□□ 0.32
SRPRA-206ENST00000532259 KRT79Q5XKE5 535 aa17.05■□□□□ 0.32
SRPRA-206ENST00000532259 E4F1Q66K89 784 aaPredicted RBP17.05■□□□□ 0.32
SRPRA-206ENST00000532259 ZNF341Q9BYN7 854 aa17.05■□□□□ 0.32
SRPRA-206ENST00000532259 VCPKMTQ9H867 229 aa17.05■□□□□ 0.32
SRPRA-206ENST00000532259 GOPCQ9HD26 462 aa17.05■□□□□ 0.32
SRPRA-206ENST00000532259 CNOT7Q9UIV1 285 aaKnown RBP17.05■□□□□ 0.32
SRPRA-206ENST00000532259 RWDD2AQ9UIY3 292 aa17.05■□□□□ 0.32
SRPRA-206ENST00000532259 ZNF541Q9H0D2 1346 aa17.05■□□□□ 0.32
SRPRA-206ENST00000532259 MYMKA6NI61 221 aa17.05■□□□□ 0.32
SRPRA-206ENST00000532259 TBC1D12O60347 775 aa17.05■□□□□ 0.32
SRPRA-206ENST00000532259 CFBP00751 764 aa17.05■□□□□ 0.32
SRPRA-206ENST00000532259 IDEP14735 1019 aa17.05■□□□□ 0.32
SRPRA-206ENST00000532259 KRT31Q15323 416 aa17.05■□□□□ 0.32
SRPRA-206ENST00000532259 CCAR2Q8N163 923 aaKnown RBP17.05■□□□□ 0.32
SRPRA-206ENST00000532259 CRYGNQ8WXF5 182 aa17.05■□□□□ 0.32
SRPRA-206ENST00000532259 SLC39A2Q9NP94 309 aa17.05■□□□□ 0.32
SRPRA-206ENST00000532259 EXOC1Q9NV70 894 aa17.05■□□□□ 0.32
SRPRA-206ENST00000532259 A0A1B0GTH6 734 aa17.04■□□□□ 0.32
SRPRA-206ENST00000532259 SPDYE3A6NKU9 549 aa17.04■□□□□ 0.32
SRPRA-206ENST00000532259 SOCS7O14512 581 aa17.04■□□□□ 0.32
SRPRA-206ENST00000532259 ZNF280AP59817 542 aaPredicted RBP17.04■□□□□ 0.32
SRPRA-206ENST00000532259 ORC2Q13416 577 aaPredicted RBP17.04■□□□□ 0.32
SRPRA-206ENST00000532259 CEP135Q66GS9 1140 aa17.04■□□□□ 0.32
SRPRA-206ENST00000532259 ADSSL1Q8N142 457 aa17.04■□□□□ 0.32
SRPRA-206ENST00000532259 HACL1Q9UJ83 578 aa17.04■□□□□ 0.32
SRPRA-206ENST00000532259 RHOBTB3O94955 611 aa17.04■□□□□ 0.32
SRPRA-206ENST00000532259 INPP5BP32019 993 aa17.04■□□□□ 0.32
SRPRA-206ENST00000532259 RAD51AP2Q09MP3 1159 aa17.04■□□□□ 0.32
SRPRA-206ENST00000532259 SV2BQ7L1I2 683 aa17.04■□□□□ 0.32
SRPRA-206ENST00000532259 LARP4BQ92615 738 aaKnown RBP17.04■□□□□ 0.32
SRPRA-206ENST00000532259 FEZ1Q99689 392 aa17.04■□□□□ 0.32
SRPRA-206ENST00000532259 RAB34Q9BZG1 259 aa17.04■□□□□ 0.32
SRPRA-206ENST00000532259 ADD3Q9UEY8 706 aaKnown RBP17.04■□□□□ 0.32
SRPRA-206ENST00000532259 KCNJ18B7U540 433 aa17.03■□□□□ 0.32
SRPRA-206ENST00000532259 KCNJ12Q14500 433 aa17.03■□□□□ 0.32
SRPRA-206ENST00000532259 NBPF12Q5TAG4 269 aaPredicted RBP17.03■□□□□ 0.32
SRPRA-206ENST00000532259 LENG9Q96B70 501 aa17.03■□□□□ 0.32
SRPRA-206ENST00000532259 TRIM47Q96LD4 638 aa17.03■□□□□ 0.32
SRPRA-206ENST00000532259 N4BP3O15049 544 aa17.03■□□□□ 0.32
SRPRA-206ENST00000532259 CACNB1Q02641 598 aaPredicted RBP17.03■□□□□ 0.32
SRPRA-206ENST00000532259 PDIA5Q14554 519 aa17.03■□□□□ 0.32
SRPRA-206ENST00000532259 IRF2BP1Q8IU81 584 aa17.03■□□□□ 0.32
SRPRA-206ENST00000532259 GIMAP8Q8ND71 665 aaPredicted RBP17.03■□□□□ 0.32
SRPRA-206ENST00000532259 GLIS3Q8NEA6 775 aa17.03■□□□□ 0.32
SRPRA-206ENST00000532259 KCNMB3Q9NPA1 279 aa17.03■□□□□ 0.32
SRPRA-206ENST00000532259 NKRFO15226 690 aaKnown RBP eCLIP17.02■□□□□ 0.32
SRPRA-206ENST00000532259 ERCC3P19447 782 aa17.02■□□□□ 0.32
SRPRA-206ENST00000532259 RBM10P98175 930 aaKnown RBP17.02■□□□□ 0.32
SRPRA-206ENST00000532259 MAP3K10Q02779 954 aa17.02■□□□□ 0.32
SRPRA-206ENST00000532259 KCNB1Q14721 858 aa17.02■□□□□ 0.32
SRPRA-206ENST00000532259 C7orf25Q9BPX7 421 aa17.02■□□□□ 0.32
SRPRA-206ENST00000532259 SRRTQ9BXP5 876 aaKnown RBP17.02■□□□□ 0.32
SRPRA-206ENST00000532259 DEFB129Q9H1M3 183 aa17.02■□□□□ 0.32
SRPRA-206ENST00000532259 CD2APQ9Y5K6 639 aa17.02■□□□□ 0.32
SRPRA-206ENST00000532259 POTEB3A0JP26 581 aa17.02■□□□□ 0.31
SRPRA-206ENST00000532259 POTECB2RU33 542 aa17.02■□□□□ 0.31
SRPRA-206ENST00000532259 E9PMD0 336 aa17.02■□□□□ 0.31
SRPRA-206ENST00000532259 FZD9O00144 591 aa17.02■□□□□ 0.31
SRPRA-206ENST00000532259 RIOK3O14730 519 aaKnown RBP17.02■□□□□ 0.31
SRPRA-206ENST00000532259 ASNSP08243 561 aa17.02■□□□□ 0.31
SRPRA-206ENST00000532259 USP11P51784 963 aa17.02■□□□□ 0.31
SRPRA-206ENST00000532259 TBX2Q13207 712 aaPredicted RBP17.02■□□□□ 0.31
SRPRA-206ENST00000532259 PTPN14Q15678 1187 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms