RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 IPPQ9Y573 584 aa5.33□□□□□ -1.56
AC055878.1-201ENST00000531858 PCDHGC5Q9Y5F6 944 aa5.33□□□□□ -1.56
AC055878.1-201ENST00000531858 FHOD1Q9Y613 1164 aa5.33□□□□□ -1.56
AC055878.1-201ENST00000531858 KLHL33A6NCF5 533 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 ZNF891A8MT65 544 aaPredicted RBP5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 ADARB2-AS1A8MUL3 147 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 TBX1O43435 398 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 ZNF500O60304 480 aaPredicted RBP5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 CTNND1O60716 968 aaKnown RBP5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 GLRX3O76003 335 aaKnown RBP5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 IL33O95760 270 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 MT-CO1P00395 513 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 LDHCP07864 332 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 HSD3B1P14060 373 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 CPB1P15086 417 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 ZKSCAN1P17029 563 aaPredicted RBP5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 FGFR3P22607 806 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 GRIK1P39086 918 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 AFF1P51825 1210 aaKnown RBP5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 POU5F1Q01860 360 aaKnown RBP5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 GUCY1A3Q02108 690 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 AUHQ13825 339 aaKnown RBP5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 SIM2Q14190 667 aaPredicted RBP5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 GALEQ14376 348 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 KCTD2Q14681 263 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 PUM3Q15397 648 aaKnown RBP5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 DACT2Q5SW24 774 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 DUSP27Q5VZP5 1158 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 DCAF15Q66K64 600 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 PGM2L1Q6PCE3 622 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 B3GNT9Q6UX72 402 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 SYT9Q86SS6 491 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 C12orf40Q86WS4 652 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 EFHBQ8N7U6 833 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 PDILTQ8N807 584 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 CHST14Q8NCH0 376 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 ZNF837Q96EG3 531 aaPredicted RBP5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 ABHD17AQ96GS6 310 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 LPIN3Q9BQK8 851 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 MKRN2Q9H000 416 aaKnown RBP5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 RNF38Q9H0F5 515 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 TRMT13Q9NUP7 481 aaKnown RBP5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 FBXO2Q9UK22 296 aaPredicted RBP5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 NSFL1CQ9UNZ2 370 aaKnown RBP5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 DGKBQ9Y6T7 804 aa5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 MORC2Q9Y6X9 1032 aaPredicted RBP5.32□□□□□ -1.56
AC055878.1-201ENST00000531858 GPR25O00155 361 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 WNT9AO14904 365 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 GSTA4O15217 222 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 OIP5O43482 229 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 PIP5K1CO60331 668 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 OFD1O75665 1012 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 KCNH1O95259 989 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 CST3P01034 146 aaPredicted RBP5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 SNRPB2P08579 225 aaKnown RBP5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 KCNJ6P48051 423 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 ALDH5A1P51649 535 aaPredicted RBP5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 USP14P54578 494 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 GPR85P60893 370 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 SNRPNP63162 240 aaKnown RBP5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 ZMYM1Q5SVZ6 1142 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 IFIT1BQ5T764 474 aaKnown RBP5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 NBPF12Q5TAG4 269 aaPredicted RBP5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 SRLQ86TD4 932 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 NXPE1Q8N323 547 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 SPATA5Q8NB90 893 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 KLHL23Q8NBE8 558 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 TMEM145Q8NBT3 493 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 SLC5A5Q92911 643 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 PGBD4Q96DM1 585 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 MPP4Q96JB8 637 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 GPR101Q96P66 508 aaPredicted RBP5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 TAAR9Q96RI9 348 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 ISCA1Q9BUE6 129 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 SLC12A5Q9H2X9 1139 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 PICK1Q9NRD5 415 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 GPR27Q9NS67 375 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 RNF112Q9ULX5 631 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 FAM50BQ9Y247 325 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 PCDHA9Q9Y5H5 950 aa5.31□□□□□ -1.56
AC055878.1-201ENST00000531858 CCER2I3L3R5 266 aa5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 TRAF5O00463 557 aa5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 SHOXO15266 292 aa5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 FAM193AP78312 1265 aa5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 PHC1P78364 1004 aa5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 ID3Q02535 119 aa5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 TBX2Q13207 712 aaPredicted RBP5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 ELF2Q15723 593 aa5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 SKOR2Q2VWA4 1001 aaPredicted RBP5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 FAM47CQ5HY64 1035 aa5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 NOL9Q5SY16 702 aaKnown RBP5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 ABHD17CQ6PCB6 329 aa5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 USP53Q70EK8 1073 aa5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 MTDHQ86UE4 582 aaKnown RBP5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 DRC7Q8IY82 874 aa5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 IGSF22Q8N9C0 903 aa5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 CLRN3Q8NCR9 226 aa5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 RNF214Q8ND24 703 aa5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 DCAF11Q8TEB1 546 aa5.3□□□□□ -1.56
AC055878.1-201ENST00000531858 SKA1Q96BD8 255 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms