RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 FKBP1AP62942 108 aaKnown RBP19.22■□□□□ 0.67
BRCA2-204ENST00000530893 KRT83P78385 493 aa19.22■□□□□ 0.67
BRCA2-204ENST00000530893 TBC1D8BQ0IIM8 1120 aa19.22■□□□□ 0.67
BRCA2-204ENST00000530893 KIF4BQ2VIQ3 1234 aa19.22■□□□□ 0.67
BRCA2-204ENST00000530893 DCAF8Q5TAQ9 597 aa19.22■□□□□ 0.67
BRCA2-204ENST00000530893 GUF1Q8N442 669 aaKnown RBP19.22■□□□□ 0.67
BRCA2-204ENST00000530893 ZDHHC15Q96MV8 337 aa19.22■□□□□ 0.67
BRCA2-204ENST00000530893 NAPGQ99747 312 aaPredicted RBP19.22■□□□□ 0.67
BRCA2-204ENST00000530893 ZNHIT6Q9NWK9 470 aaKnown RBP19.22■□□□□ 0.67
BRCA2-204ENST00000530893 POTEB2H3BUK9 544 aa19.21■□□□□ 0.67
BRCA2-204ENST00000530893 FCER1AP12319 257 aa19.21■□□□□ 0.67
BRCA2-204ENST00000530893 TRIM21P19474 475 aaKnown RBP19.21■□□□□ 0.67
BRCA2-204ENST00000530893 MTIF2P46199 727 aaKnown RBP19.21■□□□□ 0.67
BRCA2-204ENST00000530893 CHMP4BP1P59074 171 aa19.21■□□□□ 0.67
BRCA2-204ENST00000530893 ZBED6P86452 979 aa19.21■□□□□ 0.67
BRCA2-204ENST00000530893 TMEM119Q4V9L6 283 aa19.21■□□□□ 0.67
BRCA2-204ENST00000530893 FKBP15Q5T1M5 1219 aa19.21■□□□□ 0.67
BRCA2-204ENST00000530893 CCDC170Q8IYT3 715 aa19.21■□□□□ 0.67
BRCA2-204ENST00000530893 PROM2Q8N271 834 aa19.21■□□□□ 0.67
BRCA2-204ENST00000530893 RAD54LQ92698 747 aa19.21■□□□□ 0.67
BRCA2-204ENST00000530893 MASTLQ96GX5 879 aa19.21■□□□□ 0.67
BRCA2-204ENST00000530893 CHP1Q99653 195 aa19.21■□□□□ 0.67
BRCA2-204ENST00000530893 SLF1Q9BQI6 1058 aa19.21■□□□□ 0.67
BRCA2-204ENST00000530893 PRDM10Q9NQV6 1147 aa19.21■□□□□ 0.67
BRCA2-204ENST00000530893 BRWD3Q6RI45 1802 aa19.21■□□□□ 0.67
BRCA2-204ENST00000530893 A0A0U1RQJ8 604 aa19.2■□□□□ 0.66
BRCA2-204ENST00000530893 MYMKA6NI61 221 aa19.2■□□□□ 0.66
BRCA2-204ENST00000530893 TNNI2P48788 182 aa19.2■□□□□ 0.66
BRCA2-204ENST00000530893 FAM193AP78312 1265 aa19.2■□□□□ 0.66
BRCA2-204ENST00000530893 HDLBPQ00341 1268 aaKnown RBP19.2■□□□□ 0.66
BRCA2-204ENST00000530893 CDK17Q00537 523 aa19.2■□□□□ 0.66
BRCA2-204ENST00000530893 LRRC63Q05C16 580 aa19.2■□□□□ 0.66
BRCA2-204ENST00000530893 WHAMMP3Q1A5X7 153 aa19.2■□□□□ 0.66
BRCA2-204ENST00000530893 TEX35Q5T0J7 233 aa19.2■□□□□ 0.66
BRCA2-204ENST00000530893 SLC35F6Q8N357 371 aa19.2■□□□□ 0.66
BRCA2-204ENST00000530893 FLAD1Q8NFF5 587 aa19.2■□□□□ 0.66
BRCA2-204ENST00000530893 SNX29Q8TEQ0 813 aa19.2■□□□□ 0.66
BRCA2-204ENST00000530893 ATRIPQ8WXE1 791 aa19.2■□□□□ 0.66
BRCA2-204ENST00000530893 MKL1Q969V6 931 aa19.2■□□□□ 0.66
BRCA2-204ENST00000530893 NOC4LQ9BVI4 516 aaKnown RBP19.2■□□□□ 0.66
BRCA2-204ENST00000530893 DDX25Q9UHL0 483 aaKnown RBP19.2■□□□□ 0.66
BRCA2-204ENST00000530893 PPP1R11O60927 126 aaPredicted RBP19.2■□□□□ 0.66
BRCA2-204ENST00000530893 PNMA6AP0CW24 399 aaPredicted RBP19.2■□□□□ 0.66
BRCA2-204ENST00000530893 CYLC1P35663 651 aaPredicted RBP19.2■□□□□ 0.66
BRCA2-204ENST00000530893 SCNN1DP51172 638 aa19.2■□□□□ 0.66
BRCA2-204ENST00000530893 DOK7Q18PE1 504 aa19.2■□□□□ 0.66
BRCA2-204ENST00000530893 PSTPIP2Q9H939 334 aa19.2■□□□□ 0.66
BRCA2-204ENST00000530893 MPHOSPH10O00566 681 aaKnown RBP19.19■□□□□ 0.66
BRCA2-204ENST00000530893 NPM3O75607 178 aaKnown RBP19.19■□□□□ 0.66
BRCA2-204ENST00000530893 CRKP46108 304 aa19.19■□□□□ 0.66
BRCA2-204ENST00000530893 MCM6Q14566 821 aa19.19■□□□□ 0.66
BRCA2-204ENST00000530893 CCDC96Q2M329 555 aa19.19■□□□□ 0.66
BRCA2-204ENST00000530893 MIIPQ5JXC2 388 aa19.19■□□□□ 0.66
BRCA2-204ENST00000530893 WDR59Q6PJI9 974 aa19.19■□□□□ 0.66
BRCA2-204ENST00000530893 CLEC10AQ8IUN9 316 aa19.19■□□□□ 0.66
BRCA2-204ENST00000530893 EHBP1Q8NDI1 1231 aa19.19■□□□□ 0.66
BRCA2-204ENST00000530893 DCAF4Q8WV16 495 aa19.19■□□□□ 0.66
BRCA2-204ENST00000530893 NT5C3AQ9H0P0 336 aa19.19■□□□□ 0.66
BRCA2-204ENST00000530893 SEMA6BQ9H3T3 888 aa19.19■□□□□ 0.66
BRCA2-204ENST00000530893 KDM3AQ9Y4C1 1321 aa19.19■□□□□ 0.66
BRCA2-204ENST00000530893 HYIQ5T013 277 aa19.18■□□□□ 0.66
BRCA2-204ENST00000530893 MCTP2Q6DN12 878 aa19.18■□□□□ 0.66
BRCA2-204ENST00000530893 SLC39A2Q9NP94 309 aa19.18■□□□□ 0.66
BRCA2-204ENST00000530893 NYAP2Q9P242 653 aa19.18■□□□□ 0.66
BRCA2-204ENST00000530893 ATF5Q9Y2D1 282 aaPredicted RBP19.18■□□□□ 0.66
BRCA2-204ENST00000530893 COL11A2P13942 1736 aaPredicted RBP19.18■□□□□ 0.66
BRCA2-204ENST00000530893 CCDC151A5D8V7 595 aa19.18■□□□□ 0.66
BRCA2-204ENST00000530893 POTEMA6NI47 508 aa19.18■□□□□ 0.66
BRCA2-204ENST00000530893 EHHADHQ08426 723 aa19.18■□□□□ 0.66
BRCA2-204ENST00000530893 TTBK2Q6IQ55 1244 aa19.18■□□□□ 0.66
BRCA2-204ENST00000530893 IDI2Q9BXS1 227 aa19.18■□□□□ 0.66
BRCA2-204ENST00000530893 PARD6BQ9BYG5 372 aa19.18■□□□□ 0.66
BRCA2-204ENST00000530893 KANSL2Q9H9L4 492 aa19.18■□□□□ 0.66
BRCA2-204ENST00000530893 REXO2Q9Y3B8 237 aaKnown RBP19.18■□□□□ 0.66
BRCA2-204ENST00000530893 ADAMTSL1Q8N6G6 1762 aa19.18■□□□□ 0.66
BRCA2-204ENST00000530893 PSMD14O00487 310 aa19.17■□□□□ 0.66
BRCA2-204ENST00000530893 IPO7O95373 1038 aaKnown RBP19.17■□□□□ 0.66
BRCA2-204ENST00000530893 USP11P51784 963 aa19.17■□□□□ 0.66
BRCA2-204ENST00000530893 BRD3Q15059 726 aa19.17■□□□□ 0.66
BRCA2-204ENST00000530893 STRIP1Q5VSL9 837 aa19.17■□□□□ 0.66
BRCA2-204ENST00000530893 CC2D1AQ6P1N0 951 aaPredicted RBP19.17■□□□□ 0.66
BRCA2-204ENST00000530893 CCDC84Q86UT8 332 aaPredicted RBP19.17■□□□□ 0.66
BRCA2-204ENST00000530893 HAS1Q92839 578 aa19.17■□□□□ 0.66
BRCA2-204ENST00000530893 MXD3Q9BW11 206 aa19.17■□□□□ 0.66
BRCA2-204ENST00000530893 ARFGAP3Q9NP61 516 aa19.17■□□□□ 0.66
BRCA2-204ENST00000530893 PI4KBQ9UBF8 816 aa19.17■□□□□ 0.66
BRCA2-204ENST00000530893 PCDHA12Q9UN75 941 aa19.17■□□□□ 0.66
BRCA2-204ENST00000530893 MYH7BA7E2Y1 1941 aa19.17■□□□□ 0.66
BRCA2-204ENST00000530893 EIF3CLB5ME19 914 aaKnown RBP19.17■□□□□ 0.66
BRCA2-204ENST00000530893 USP17L10C9JJH3 530 aa19.17■□□□□ 0.66
BRCA2-204ENST00000530893 TUBBP07437 444 aa19.17■□□□□ 0.66
BRCA2-204ENST00000530893 NFIAQ12857 509 aa19.17■□□□□ 0.66
BRCA2-204ENST00000530893 UBE2SQ16763 222 aa19.17■□□□□ 0.66
BRCA2-204ENST00000530893 DDX12PQ92771 950 aa19.17■□□□□ 0.66
BRCA2-204ENST00000530893 AKT1S1Q96B36 256 aa19.17■□□□□ 0.66
BRCA2-204ENST00000530893 EIF3CQ99613 913 aaKnown RBP19.17■□□□□ 0.66
BRCA2-204ENST00000530893 PLSCR1O15162 318 aa19.16■□□□□ 0.66
BRCA2-204ENST00000530893 KRT86O43790 486 aa19.16■□□□□ 0.66
BRCA2-204ENST00000530893 MARCH6O60337 910 aa19.16■□□□□ 0.66
BRCA2-204ENST00000530893 HNRNPH3P31942 346 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms